Wall clock time and date at job start Sun Mar 7 2021 08:57:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47188 * 2 1 4 4 C 1.50694 * 109.47324 * 120.00162 * 2 1 3 5 5 C 1.38904 * 119.68046 * 245.31712 * 4 2 1 6 6 C 1.36472 * 120.61626 * 180.29292 * 5 4 2 7 7 C 1.40058 * 119.83213 * 359.67821 * 6 5 4 8 8 C 1.41598 * 133.38470 * 180.02562 * 7 6 5 9 9 C 1.35866 * 107.72553 * 179.97438 * 8 7 6 10 10 C 1.47057 * 125.42182 * 180.02562 * 9 8 7 11 11 O 1.21647 * 120.00078 * 359.97199 * 10 9 8 12 12 N 1.34779 * 120.00140 * 179.97438 * 10 9 8 13 13 C 1.46497 * 120.00265 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47078 * 179.97438 * 13 12 10 15 15 F 1.39898 * 112.84974 * 316.19802 * 14 13 12 16 16 C 1.53778 * 113.61293 * 87.50493 * 14 13 12 17 17 C 1.53777 * 87.08192 * 139.98333 * 16 14 13 18 18 H 1.08996 * 113.61855 * 89.11742 * 17 16 14 19 19 C 1.53009 * 113.68758 * 220.01067 * 17 16 14 20 20 O 1.42905 * 109.46918 * 272.52864 * 19 17 16 21 21 C 1.53781 * 87.08185 * 334.56472 * 17 16 14 22 22 N 1.38146 * 109.14828 * 0.02562 * 9 8 7 23 23 C 1.37485 * 108.79115 * 359.97438 * 22 9 8 24 24 C 1.37712 * 119.67439 * 64.99851 * 4 2 1 25 25 H 0.96706 * 114.00069 * 300.00167 * 1 2 3 26 26 H 1.09003 * 109.47037 * 240.00716 * 2 1 3 27 27 H 1.48499 * 110.00217 * 300.00453 * 3 2 1 28 28 H 1.48501 * 109.99597 * 61.32160 * 3 2 1 29 29 H 1.07999 * 119.68942 * 359.97412 * 5 4 2 30 30 H 1.07998 * 120.08126 * 179.66066 * 6 5 4 31 31 H 1.07997 * 126.13357 * 359.97438 * 8 7 6 32 32 H 0.97004 * 119.99694 * 359.97438 * 12 10 9 33 33 H 1.09003 * 109.47307 * 299.99764 * 13 12 10 34 34 H 1.09002 * 109.47188 * 59.99883 * 13 12 10 35 35 H 1.09004 * 113.61286 * 254.52984 * 16 14 13 36 36 H 1.08996 * 113.61580 * 25.43042 * 16 14 13 37 37 H 1.08998 * 109.47134 * 32.53189 * 19 17 16 38 38 H 1.09003 * 109.47202 * 152.53566 * 19 17 16 39 39 H 0.96699 * 113.99713 * 179.97438 * 20 19 17 40 40 H 1.09001 * 113.61595 * 270.88727 * 21 17 16 41 41 H 1.09000 * 113.69211 * 139.99095 * 21 17 16 42 42 H 0.97009 * 125.60258 * 180.02562 * 22 9 8 43 43 H 1.08002 * 120.09919 * 0.02818 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6357 -0.0010 2.1948 6 6 3.1045 -0.6265 3.3135 7 6 2.8691 -1.9949 3.4971 8 6 3.2119 -2.9121 4.5199 9 6 2.7161 -4.1274 4.1688 10 6 2.8489 -5.3620 4.9566 11 8 3.4438 -5.3455 6.0176 12 7 2.3116 -6.5119 4.5031 13 6 2.4445 -7.7420 5.2876 14 6 1.7506 -8.8918 4.5545 15 9 0.5039 -8.5299 4.0330 16 6 2.6571 -9.6141 3.5439 17 6 2.0155 -10.9261 4.0252 18 1 1.1169 -11.2011 3.4730 19 6 3.0080 -12.0829 4.1589 20 8 3.1227 -12.7594 2.9054 21 6 1.7265 -10.2060 5.3528 22 7 2.0673 -4.0184 2.9541 23 6 2.1493 -2.7153 2.5235 24 6 1.6818 -2.0552 1.3908 25 1 -0.3934 0.4417 0.7651 26 1 1.7923 -0.5137 -0.8901 27 1 1.5614 2.4680 -1.2084 28 1 1.5879 2.4585 1.2243 29 1 2.8185 1.0542 2.0555 30 1 3.6559 -0.0677 4.0551 31 1 3.7678 -2.6862 5.4178 32 1 1.8370 -6.5250 3.6572 33 1 3.5007 -7.9781 5.4172 34 1 1.9810 -7.6020 6.2642 35 1 2.4315 -9.3732 2.5050 36 1 3.7191 -9.5363 3.7764 37 1 3.9828 -11.6932 4.4521 38 1 2.6526 -12.7808 4.9171 39 1 3.7373 -13.5059 2.9161 40 1 2.5341 -10.2900 6.0800 41 1 0.7499 -10.4421 5.7757 42 1 1.6256 -4.7422 2.4828 43 1 1.1291 -2.5971 0.6376 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:53 Heat of formation + Delta-G solvation = -75.450144 kcal Electronic energy + Delta-G solvation = -27849.889310 eV Core-core repulsion = 23584.410756 eV Total energy + Delta-G solvation = -4265.478554 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.137 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -49.00052 -42.69528 -40.68184 -39.93350 -38.99629 -37.34432 -36.97096 -35.80550 -33.30021 -31.52479 -30.43462 -30.26468 -27.80062 -27.25702 -26.41135 -24.32877 -23.11971 -22.41409 -21.98740 -21.31418 -20.82081 -19.70912 -18.51596 -18.43820 -17.90798 -17.61919 -17.16086 -16.95080 -16.61791 -16.52715 -16.32494 -16.20290 -15.83213 -15.55836 -15.34893 -15.29363 -15.05629 -14.80754 -14.66787 -14.46079 -14.28111 -14.00503 -13.92204 -13.64357 -13.38666 -13.14863 -12.58170 -12.57223 -12.52889 -12.07990 -12.03252 -11.72893 -11.54307 -11.53273 -11.29635 -11.01806 -10.94391 -10.60822 -10.41233 -9.33749 -8.83486 -4.93460 -0.35436 0.51952 0.98102 1.28580 1.62009 1.70039 1.83270 1.99072 2.22437 2.76417 2.80406 2.89887 2.94796 3.12984 3.31315 3.36310 3.54031 3.59659 3.61967 3.70340 4.00642 4.05031 4.13797 4.22962 4.25426 4.28101 4.32575 4.35045 4.39758 4.45634 4.46792 4.48848 4.62004 4.63239 4.70558 4.75417 4.88417 4.95702 5.01165 5.18290 5.31897 5.39779 5.51809 5.60212 5.95117 6.13007 6.29585 6.39865 6.53977 6.90477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.075 4.075 3 Si 0.691 3.309 4 C -0.085 4.085 5 C -0.148 4.148 6 C -0.050 4.050 7 C -0.116 4.116 8 C -0.098 4.098 9 C 0.013 3.987 10 C 0.587 3.413 11 O -0.516 6.516 12 N -0.727 5.727 13 C 0.114 3.886 14 C 0.078 3.922 15 F -0.184 7.184 16 C -0.146 4.146 17 C -0.108 4.108 18 H 0.105 0.895 19 C 0.085 3.915 20 O -0.573 6.573 21 C -0.142 4.142 22 N -0.578 5.578 23 C 0.116 3.884 24 C -0.103 4.103 25 H 0.377 0.623 26 H 0.118 0.882 27 H -0.259 1.259 28 H -0.259 1.259 29 H 0.130 0.870 30 H 0.132 0.868 31 H 0.159 0.841 32 H 0.400 0.600 33 H 0.094 0.906 34 H 0.086 0.914 35 H 0.084 0.916 36 H 0.103 0.897 37 H 0.050 0.950 38 H 0.051 0.949 39 H 0.383 0.617 40 H 0.107 0.893 41 H 0.091 0.909 42 H 0.418 0.582 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.795 -2.646 -0.129 3.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.185 4.185 3 Si 0.593 3.407 4 C -0.087 4.087 5 C -0.166 4.166 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.125 4.125 9 C -0.096 4.096 10 C 0.374 3.626 11 O -0.391 6.391 12 N -0.379 5.379 13 C -0.010 4.010 14 C 0.060 3.940 15 F -0.165 7.165 16 C -0.184 4.184 17 C -0.127 4.127 18 H 0.123 0.877 19 C 0.008 3.992 20 O -0.379 6.379 21 C -0.180 4.180 22 N -0.183 5.183 23 C 0.006 3.994 24 C -0.124 4.124 25 H 0.224 0.776 26 H 0.136 0.864 27 H -0.184 1.184 28 H -0.184 1.184 29 H 0.147 0.853 30 H 0.150 0.850 31 H 0.177 0.823 32 H 0.235 0.765 33 H 0.112 0.888 34 H 0.104 0.896 35 H 0.103 0.897 36 H 0.122 0.878 37 H 0.068 0.932 38 H 0.069 0.931 39 H 0.230 0.770 40 H 0.125 0.875 41 H 0.109 0.891 42 H 0.256 0.744 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 2.590 -1.829 -0.095 3.172 hybrid contribution -1.333 -1.099 0.038 1.728 sum 1.256 -2.928 -0.057 3.186 Atomic orbital electron populations 1.86604 1.17656 1.80031 1.49380 1.25054 0.83996 1.11196 0.98249 0.94802 0.91647 0.74218 0.80044 1.19968 0.98781 0.93446 0.96546 1.20539 1.01400 0.99836 0.94854 1.20374 0.97547 0.91888 0.97086 1.18226 1.03686 0.94355 0.95837 1.20977 1.01890 0.89807 0.99816 1.20016 1.04985 0.95796 0.88835 1.17168 0.78886 0.81654 0.84907 1.90888 1.41639 1.84963 1.21622 1.45705 1.58113 1.08687 1.25433 1.21882 1.01924 0.81903 0.95295 1.22103 0.81223 0.94128 0.96578 1.92875 1.42995 1.92838 1.87751 1.23736 0.99813 0.94836 0.99995 1.22507 0.99794 0.93347 0.97018 0.87670 1.22140 0.97747 0.93504 0.85860 1.86487 1.68629 1.49422 1.33385 1.23560 1.04816 0.92453 0.97132 1.41911 1.48840 1.08967 1.18589 1.18314 1.00648 0.83851 0.96572 1.19882 1.02586 0.93912 0.96024 0.77561 0.86391 1.18384 1.18437 0.85277 0.85007 0.82326 0.76518 0.88779 0.89592 0.89687 0.87830 0.93165 0.93075 0.76999 0.87474 0.89071 0.74422 0.85534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.55 12.83 -35.23 -0.45 -1.01 16 2 C -0.08 0.04 2.79 36.00 0.10 0.14 16 3 Si 0.69 -0.79 29.86 -169.99 -5.08 -5.87 16 4 C -0.09 -0.01 5.35 -104.57 -0.56 -0.57 16 5 C -0.15 0.04 8.59 -39.97 -0.34 -0.30 16 6 C -0.05 -0.01 10.06 -39.54 -0.40 -0.41 16 7 C -0.12 -0.20 6.16 -106.93 -0.66 -0.85 16 8 C -0.10 -0.19 10.53 -39.15 -0.41 -0.60 16 9 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 10 C 0.59 1.20 7.80 -12.68 -0.10 1.10 16 11 O -0.52 -2.74 16.84 5.24 0.09 -2.65 16 12 N -0.73 0.46 5.45 -61.50 -0.33 0.12 16 13 C 0.11 -0.15 5.42 -4.04 -0.02 -0.17 16 14 C 0.08 -0.14 1.74 -89.81 -0.16 -0.30 16 15 F -0.18 -0.07 16.58 2.25 0.04 -0.04 16 16 C -0.15 0.32 7.08 -25.92 -0.18 0.13 16 17 C -0.11 0.18 3.99 -89.80 -0.36 -0.17 16 18 H 0.11 -0.02 8.14 -51.93 -0.42 -0.45 16 19 C 0.09 -0.18 6.89 37.16 0.26 0.08 16 20 O -0.57 0.18 13.66 -35.23 -0.48 -0.30 16 21 C -0.14 0.41 7.10 -25.92 -0.18 0.22 16 22 N -0.58 0.14 6.07 -7.36 -0.04 0.09 16 23 C 0.12 0.14 7.25 -83.98 -0.61 -0.47 16 24 C -0.10 -0.06 9.69 -39.42 -0.38 -0.44 16 25 H 0.38 -0.61 8.70 45.56 0.40 -0.22 16 26 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 28 H -0.26 -0.19 6.99 56.52 0.40 0.20 16 29 H 0.13 -0.25 4.78 -52.49 -0.25 -0.50 16 30 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 31 H 0.16 0.18 8.06 -52.49 -0.42 -0.24 16 32 H 0.40 -0.93 7.08 -40.82 -0.29 -1.22 16 33 H 0.09 -0.18 7.84 -51.93 -0.41 -0.59 16 34 H 0.09 -0.06 8.14 -51.93 -0.42 -0.49 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.10 -0.32 7.66 -51.93 -0.40 -0.72 16 37 H 0.05 -0.17 7.85 -51.93 -0.41 -0.57 16 38 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 40 H 0.11 -0.48 8.06 -51.93 -0.42 -0.90 16 41 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 42 H 0.42 -1.23 8.12 -40.82 -0.33 -1.56 16 43 H 0.13 -0.04 8.06 -52.49 -0.42 -0.47 16 LS Contribution 364.83 15.07 5.50 5.50 Total: 0.00 -9.45 364.83 -10.04 -19.49 By element: Atomic # 1 Polarization: -7.46 SS G_CDS: -4.69 Total: -12.15 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -4.58 Total: -3.19 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.38 Total: 0.21 kcal Atomic # 8 Polarization: -3.11 SS G_CDS: -0.84 Total: -3.96 kcal Atomic # 9 Polarization: -0.07 SS G_CDS: 0.04 Total: -0.04 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.08 Total: -5.87 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.45 -10.04 -19.49 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.962 kcal (2) G-P(sol) polarization free energy of solvation -9.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.488 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds