Wall clock time and date at job start Sun Mar 7 2021 08:57:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47188 * 2 1 4 4 C 1.50694 * 109.47324 * 120.00162 * 2 1 3 5 5 C 1.38904 * 119.68046 * 245.31712 * 4 2 1 6 6 C 1.36472 * 120.61626 * 180.29292 * 5 4 2 7 7 C 1.40058 * 119.83213 * 359.67821 * 6 5 4 8 8 C 1.41598 * 133.38470 * 180.02562 * 7 6 5 9 9 C 1.35866 * 107.72553 * 179.97438 * 8 7 6 10 10 C 1.47057 * 125.42182 * 180.02562 * 9 8 7 11 11 O 1.21647 * 120.00078 * 359.97199 * 10 9 8 12 12 N 1.34779 * 120.00140 * 179.97438 * 10 9 8 13 13 C 1.46497 * 120.00265 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47078 * 179.97438 * 13 12 10 15 15 F 1.39898 * 112.84974 * 316.19802 * 14 13 12 16 16 C 1.53778 * 113.61293 * 87.50493 * 14 13 12 17 17 C 1.53777 * 87.08192 * 139.98333 * 16 14 13 18 18 H 1.08996 * 113.61855 * 89.11742 * 17 16 14 19 19 C 1.53009 * 113.68758 * 220.01067 * 17 16 14 20 20 O 1.42905 * 109.46918 * 272.52864 * 19 17 16 21 21 C 1.53781 * 87.08185 * 334.56472 * 17 16 14 22 22 N 1.38146 * 109.14828 * 0.02562 * 9 8 7 23 23 C 1.37485 * 108.79115 * 359.97438 * 22 9 8 24 24 C 1.37712 * 119.67439 * 64.99851 * 4 2 1 25 25 H 0.96706 * 114.00069 * 300.00167 * 1 2 3 26 26 H 1.09003 * 109.47037 * 240.00716 * 2 1 3 27 27 H 1.48499 * 110.00217 * 300.00453 * 3 2 1 28 28 H 1.48501 * 109.99597 * 61.32160 * 3 2 1 29 29 H 1.07999 * 119.68942 * 359.97412 * 5 4 2 30 30 H 1.07998 * 120.08126 * 179.66066 * 6 5 4 31 31 H 1.07997 * 126.13357 * 359.97438 * 8 7 6 32 32 H 0.97004 * 119.99694 * 359.97438 * 12 10 9 33 33 H 1.09003 * 109.47307 * 299.99764 * 13 12 10 34 34 H 1.09002 * 109.47188 * 59.99883 * 13 12 10 35 35 H 1.09004 * 113.61286 * 254.52984 * 16 14 13 36 36 H 1.08996 * 113.61580 * 25.43042 * 16 14 13 37 37 H 1.08998 * 109.47134 * 32.53189 * 19 17 16 38 38 H 1.09003 * 109.47202 * 152.53566 * 19 17 16 39 39 H 0.96699 * 113.99713 * 179.97438 * 20 19 17 40 40 H 1.09001 * 113.61595 * 270.88727 * 21 17 16 41 41 H 1.09000 * 113.69211 * 139.99095 * 21 17 16 42 42 H 0.97009 * 125.60258 * 180.02562 * 22 9 8 43 43 H 1.08002 * 120.09919 * 0.02818 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6357 -0.0010 2.1948 6 6 3.1045 -0.6265 3.3135 7 6 2.8691 -1.9949 3.4971 8 6 3.2119 -2.9121 4.5199 9 6 2.7161 -4.1274 4.1688 10 6 2.8489 -5.3620 4.9566 11 8 3.4438 -5.3455 6.0176 12 7 2.3116 -6.5119 4.5031 13 6 2.4445 -7.7420 5.2876 14 6 1.7506 -8.8918 4.5545 15 9 0.5039 -8.5299 4.0330 16 6 2.6571 -9.6141 3.5439 17 6 2.0155 -10.9261 4.0252 18 1 1.1169 -11.2011 3.4730 19 6 3.0080 -12.0829 4.1589 20 8 3.1227 -12.7594 2.9054 21 6 1.7265 -10.2060 5.3528 22 7 2.0673 -4.0184 2.9541 23 6 2.1493 -2.7153 2.5235 24 6 1.6818 -2.0552 1.3908 25 1 -0.3934 0.4417 0.7651 26 1 1.7923 -0.5137 -0.8901 27 1 1.5614 2.4680 -1.2084 28 1 1.5879 2.4585 1.2243 29 1 2.8185 1.0542 2.0555 30 1 3.6559 -0.0677 4.0551 31 1 3.7678 -2.6862 5.4178 32 1 1.8370 -6.5250 3.6572 33 1 3.5007 -7.9781 5.4172 34 1 1.9810 -7.6020 6.2642 35 1 2.4315 -9.3732 2.5050 36 1 3.7191 -9.5363 3.7764 37 1 3.9828 -11.6932 4.4521 38 1 2.6526 -12.7808 4.9171 39 1 3.7373 -13.5059 2.9161 40 1 2.5341 -10.2900 6.0800 41 1 0.7499 -10.4421 5.7757 42 1 1.6256 -4.7422 2.4828 43 1 1.1291 -2.5971 0.6376 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:52 Heat of formation + Delta-G solvation = -78.198610 kcal Electronic energy + Delta-G solvation = -27850.008493 eV Core-core repulsion = 23584.410756 eV Total energy + Delta-G solvation = -4265.597736 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.137 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -48.95954 -42.73355 -40.75211 -39.82646 -39.01695 -37.23630 -36.99324 -35.85426 -33.32409 -31.54367 -30.44706 -30.20495 -27.72423 -27.07077 -26.37391 -24.32370 -23.15476 -22.32644 -22.00254 -21.34420 -20.70489 -19.73027 -18.52563 -18.30586 -17.92851 -17.57024 -17.10598 -16.95263 -16.57389 -16.50572 -16.29906 -16.19402 -15.81153 -15.56981 -15.31780 -15.28455 -14.97905 -14.80081 -14.69410 -14.51966 -14.25858 -14.04513 -13.84894 -13.44329 -13.25035 -13.19261 -12.57240 -12.55175 -12.42192 -12.08236 -11.95604 -11.69955 -11.54579 -11.40067 -11.34399 -10.99332 -10.84186 -10.60758 -10.45287 -9.36697 -8.86005 -4.86555 -0.40894 0.51017 0.90018 1.33784 1.64737 1.67191 1.85371 2.01081 2.11272 2.74512 2.98284 3.05561 3.08389 3.29723 3.41723 3.47006 3.55782 3.64475 3.72415 3.78641 4.02118 4.20369 4.22504 4.27270 4.32396 4.39559 4.43807 4.49330 4.53644 4.56890 4.59967 4.65534 4.68183 4.80030 4.84003 4.86460 4.93998 4.97139 5.04191 5.29929 5.33443 5.39078 5.51430 5.56046 5.95279 6.12140 6.34369 6.50096 6.81158 6.86752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.082 4.082 3 Si 0.772 3.228 4 C -0.084 4.084 5 C -0.149 4.149 6 C -0.056 4.056 7 C -0.134 4.134 8 C -0.112 4.112 9 C 0.007 3.993 10 C 0.589 3.411 11 O -0.554 6.554 12 N -0.716 5.716 13 C 0.113 3.887 14 C 0.078 3.922 15 F -0.199 7.199 16 C -0.142 4.142 17 C -0.114 4.114 18 H 0.085 0.915 19 C 0.083 3.917 20 O -0.599 6.599 21 C -0.133 4.133 22 N -0.567 5.567 23 C 0.107 3.893 24 C -0.111 4.111 25 H 0.386 0.614 26 H 0.127 0.873 27 H -0.306 1.306 28 H -0.281 1.281 29 H 0.147 0.853 30 H 0.149 0.851 31 H 0.159 0.841 32 H 0.409 0.591 33 H 0.104 0.896 34 H 0.081 0.919 35 H 0.076 0.924 36 H 0.117 0.883 37 H 0.066 0.934 38 H 0.059 0.941 39 H 0.397 0.603 40 H 0.128 0.872 41 H 0.089 0.911 42 H 0.429 0.571 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.308 -2.804 -0.160 4.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.191 4.191 3 Si 0.677 3.323 4 C -0.086 4.086 5 C -0.168 4.168 6 C -0.075 4.075 7 C -0.138 4.138 8 C -0.140 4.140 9 C -0.103 4.103 10 C 0.376 3.624 11 O -0.432 6.432 12 N -0.367 5.367 13 C -0.011 4.011 14 C 0.059 3.941 15 F -0.179 7.179 16 C -0.180 4.180 17 C -0.133 4.133 18 H 0.103 0.897 19 C 0.006 3.994 20 O -0.408 6.408 21 C -0.171 4.171 22 N -0.173 5.173 23 C -0.004 4.004 24 C -0.132 4.132 25 H 0.236 0.764 26 H 0.145 0.855 27 H -0.234 1.234 28 H -0.207 1.207 29 H 0.164 0.836 30 H 0.167 0.833 31 H 0.177 0.823 32 H 0.245 0.755 33 H 0.122 0.878 34 H 0.099 0.901 35 H 0.095 0.905 36 H 0.135 0.865 37 H 0.084 0.916 38 H 0.077 0.923 39 H 0.247 0.753 40 H 0.146 0.854 41 H 0.107 0.893 42 H 0.269 0.731 43 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.088 -2.045 -0.143 3.707 hybrid contribution -1.537 -1.042 -0.006 1.857 sum 1.551 -3.086 -0.149 3.457 Atomic orbital electron populations 1.86576 1.18483 1.80424 1.50210 1.25251 0.83424 1.11939 0.98440 0.93886 0.90333 0.71864 0.76187 1.20078 0.98497 0.93359 0.96711 1.20739 1.00932 1.00612 0.94468 1.20635 0.97565 0.91563 0.97702 1.18443 1.04281 0.95126 0.95987 1.21121 1.02346 0.90317 1.00180 1.19960 1.05410 0.95559 0.89385 1.17228 0.78512 0.82245 0.84421 1.90862 1.43577 1.85561 1.23209 1.45658 1.57094 1.08347 1.25618 1.21978 1.02560 0.81530 0.95003 1.22186 0.80584 0.94298 0.96991 1.92845 1.44051 1.93008 1.88024 1.23752 1.00443 0.94382 0.99389 1.22483 0.99298 0.93915 0.97555 0.89707 1.22238 0.98356 0.93419 0.85433 1.86441 1.69461 1.50409 1.34512 1.23580 1.05538 0.91050 0.96924 1.41834 1.48380 1.09072 1.18027 1.18476 1.00845 0.84259 0.96802 1.20015 1.02841 0.94265 0.96052 0.76437 0.85549 1.23442 1.20737 0.83629 0.83315 0.82313 0.75507 0.87779 0.90063 0.90530 0.86451 0.91602 0.92286 0.75259 0.85371 0.89271 0.73075 0.84852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.00 12.83 -148.98 -1.91 -2.92 16 2 C -0.08 0.12 2.79 71.23 0.20 0.32 16 3 Si 0.77 -2.07 29.86 68.60 2.05 -0.02 16 4 C -0.08 0.03 5.35 -19.83 -0.11 -0.08 16 5 C -0.15 0.19 8.59 22.02 0.19 0.38 16 6 C -0.06 -0.02 10.06 22.30 0.22 0.21 16 7 C -0.13 -0.50 6.16 -21.36 -0.13 -0.63 16 8 C -0.11 -0.54 10.53 22.55 0.24 -0.31 16 9 C 0.01 0.02 6.97 39.91 0.28 0.30 16 10 C 0.59 2.84 7.80 86.56 0.68 3.51 16 11 O -0.55 -6.50 16.84 -4.18 -0.07 -6.57 16 12 N -0.72 0.70 5.45 -466.72 -2.54 -1.84 16 13 C 0.11 -0.31 5.42 86.38 0.47 0.16 16 14 C 0.08 -0.29 1.74 -10.27 -0.02 -0.31 16 15 F -0.20 -0.25 16.58 44.97 0.75 0.50 16 16 C -0.14 0.64 7.08 31.12 0.22 0.86 16 17 C -0.11 0.38 3.99 -10.27 -0.04 0.34 16 18 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 19 C 0.08 -0.40 6.89 71.99 0.50 0.10 16 20 O -0.60 0.41 13.66 -148.98 -2.04 -1.62 16 21 C -0.13 0.83 7.10 31.12 0.22 1.05 16 22 N -0.57 0.10 6.07 -177.19 -1.08 -0.98 16 23 C 0.11 0.27 7.25 39.13 0.28 0.55 16 24 C -0.11 -0.10 9.69 22.37 0.22 0.11 16 25 H 0.39 -1.33 8.70 -74.05 -0.64 -1.97 16 26 H 0.13 -0.42 7.96 -2.39 -0.02 -0.44 16 27 H -0.31 -1.63 7.11 99.48 0.71 -0.93 16 28 H -0.28 -0.24 6.99 99.48 0.70 0.46 16 29 H 0.15 -0.75 4.78 -2.91 -0.01 -0.77 16 30 H 0.15 -0.58 8.06 -2.91 -0.02 -0.61 16 31 H 0.16 0.60 8.06 -2.91 -0.02 0.58 16 32 H 0.41 -1.84 7.08 -92.71 -0.66 -2.50 16 33 H 0.10 -0.46 7.84 -2.39 -0.02 -0.48 16 34 H 0.08 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 36 H 0.12 -0.85 7.66 -2.39 -0.02 -0.87 16 37 H 0.07 -0.53 7.85 -2.39 -0.02 -0.55 16 38 H 0.06 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.40 -3.57 9.12 -74.06 -0.68 -4.24 16 40 H 0.13 -1.34 8.06 -2.39 -0.02 -1.36 16 41 H 0.09 -0.49 8.14 -2.39 -0.02 -0.50 16 42 H 0.43 -2.48 8.12 -92.70 -0.75 -3.23 16 43 H 0.13 -0.13 8.06 -2.91 -0.02 -0.15 16 Total: 0.00 -22.11 364.83 -3.03 -25.14 By element: Atomic # 1 Polarization: -16.67 SS G_CDS: -1.60 Total: -18.27 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: 3.41 Total: 6.58 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -3.62 Total: -2.82 kcal Atomic # 8 Polarization: -7.09 SS G_CDS: -4.02 Total: -11.11 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.75 Total: 0.50 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: 2.05 Total: -0.02 kcal Total: -22.11 -3.03 -25.14 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.059 kcal (2) G-P(sol) polarization free energy of solvation -22.109 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.139 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.199 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds