Wall clock time and date at job start Sun Mar 7 2021 08:57:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.46876 * 2 1 4 4 C 1.50701 * 109.47051 * 119.99833 * 2 1 3 5 5 C 1.38324 * 119.87994 * 65.00147 * 4 2 1 6 6 C 1.38015 * 120.12441 * 180.02562 * 5 4 2 7 7 C 1.39337 * 119.87673 * 359.97438 * 6 5 4 8 8 C 1.48394 * 120.12446 * 179.97438 * 7 6 5 9 9 C 1.39313 * 120.12016 * 56.76235 * 8 7 6 10 10 C 1.50705 * 120.06143 * 359.97438 * 9 8 7 11 11 C 1.50698 * 109.46632 * 81.11639 * 10 9 8 12 12 O 1.21281 * 120.00574 * 5.68810 * 11 10 9 13 13 N 1.34777 * 119.99569 * 185.69455 * 11 10 9 14 14 C 1.46506 * 119.99977 * 180.27544 * 13 11 10 15 15 C 1.52995 * 109.47475 * 179.72501 * 14 13 11 16 16 F 1.39900 * 112.85158 * 50.32788 * 15 14 13 17 17 C 1.53782 * 113.61649 * 181.52717 * 15 14 13 18 18 C 1.53788 * 87.07658 * 139.97901 * 17 15 14 19 19 H 1.08999 * 113.61596 * 89.20424 * 18 17 15 20 20 C 1.53007 * 113.61000 * 220.01598 * 18 17 15 21 21 O 1.42895 * 109.46913 * 185.00130 * 20 18 17 22 22 C 1.53788 * 113.61182 * 279.13636 * 15 14 13 23 23 C 1.38039 * 119.87847 * 180.25975 * 9 8 7 24 24 C 1.38304 * 120.12007 * 359.45072 * 23 9 8 25 25 C 1.38349 * 120.23734 * 0.54919 * 24 23 9 26 26 C 1.37986 * 120.12842 * 359.73030 * 25 24 23 27 27 C 1.39341 * 119.76124 * 0.24872 * 7 6 5 28 28 C 1.38025 * 119.87343 * 359.49518 * 27 7 6 29 29 H 0.96696 * 113.99789 * 60.00440 * 1 2 3 30 30 H 1.08995 * 109.47160 * 239.99714 * 2 1 3 31 31 H 1.48501 * 110.00279 * 298.67756 * 3 2 1 32 32 H 1.48500 * 110.00261 * 60.00185 * 3 2 1 33 33 H 1.08000 * 119.93664 * 359.97438 * 5 4 2 34 34 H 1.07996 * 120.06278 * 179.97438 * 6 5 4 35 35 H 1.08998 * 109.47406 * 321.11416 * 10 9 8 36 36 H 1.08993 * 109.46832 * 201.11627 * 10 9 8 37 37 H 0.97002 * 120.00290 * 359.97438 * 13 11 10 38 38 H 1.09003 * 109.47041 * 299.72456 * 14 13 11 39 39 H 1.09000 * 109.47174 * 59.71926 * 14 13 11 40 40 H 1.08992 * 113.61390 * 254.52647 * 17 15 14 41 41 H 1.08996 * 113.61232 * 25.43685 * 17 15 14 42 42 H 1.08994 * 109.47425 * 305.00793 * 20 18 17 43 43 H 1.09003 * 109.46517 * 65.00418 * 20 18 17 44 44 H 0.96699 * 114.00116 * 179.97438 * 21 20 18 45 45 H 1.08996 * 113.61224 * 334.56577 * 22 15 14 46 46 H 1.08998 * 113.61160 * 105.47113 * 22 15 14 47 47 H 1.07994 * 119.94253 * 179.72213 * 23 9 8 48 48 H 1.07990 * 119.88119 * 180.30532 * 24 23 9 49 49 H 1.08010 * 119.93346 * 179.74955 * 25 24 23 50 50 H 1.07999 * 120.06532 * 179.97438 * 26 25 24 51 51 H 1.07993 * 120.06531 * 179.72570 * 27 7 6 52 52 H 1.07998 * 119.94040 * 180.25519 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6832 -2.0611 1.3960 6 6 2.1404 -2.7166 2.5212 7 6 2.8537 -2.0153 3.4912 8 6 3.3473 -2.7145 4.7035 9 6 4.1778 -3.8262 4.5798 10 6 4.5768 -4.3223 3.2139 11 6 5.7180 -3.4888 2.6904 12 8 6.2316 -2.6498 3.3998 13 7 6.1679 -3.6757 1.4338 14 6 7.2813 -2.8696 0.9269 15 6 7.5965 -3.2829 -0.5121 16 9 6.4619 -3.3112 -1.3301 17 6 8.7806 -2.5184 -1.1273 18 6 9.2092 -3.8515 -1.7630 19 1 8.7677 -4.0296 -2.7435 20 6 10.7216 -4.0825 -1.7415 21 8 11.0302 -5.2827 -2.4529 22 6 8.4609 -4.5508 -0.6136 23 6 4.6298 -4.4760 5.7107 24 6 4.2689 -4.0186 6.9650 25 6 3.4444 -2.9150 7.0935 26 6 2.9821 -2.2613 5.9697 27 6 3.0968 -0.6538 3.3217 28 6 2.6395 -0.0095 2.1900 29 1 -0.3933 0.4416 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5879 2.4586 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 1.1299 -2.6035 0.6437 34 1 1.9457 -3.7711 2.6496 35 1 3.7273 -4.2420 2.5357 36 1 4.8895 -5.3641 3.2828 37 1 5.7574 -4.3469 0.8664 38 1 7.0065 -1.8151 0.9501 39 1 8.1599 -3.0299 1.5517 40 1 8.4823 -1.7637 -1.8549 41 1 9.4870 -2.1399 -0.3886 42 1 11.2246 -3.2396 -2.2153 43 1 11.0604 -4.1744 -0.7096 44 1 11.9739 -5.4919 -2.4805 45 1 9.0797 -4.7288 0.2659 46 1 7.9049 -5.4343 -0.9271 47 1 5.2700 -5.3406 5.6160 48 1 4.6287 -4.5269 7.8472 49 1 3.1623 -2.5644 8.0754 50 1 2.3382 -1.4002 6.0712 51 1 3.6453 -0.1046 4.0726 52 1 2.8309 1.0449 2.0556 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13158394.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:56 Heat of formation + Delta-G solvation = -85.096549 kcal Electronic energy + Delta-G solvation = -36057.143896 eV Core-core repulsion = 31289.145435 eV Total energy + Delta-G solvation = -4767.998461 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.173 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -48.80420 -41.48771 -40.45438 -39.79933 -39.40875 -37.71336 -37.16135 -35.50877 -34.37216 -33.50240 -32.01196 -30.85952 -30.48759 -28.69021 -27.07826 -26.80587 -26.40806 -24.02864 -23.39364 -22.82658 -22.13245 -21.73034 -21.26375 -20.60353 -18.59459 -18.46855 -18.25354 -18.05960 -17.53227 -17.13922 -16.95467 -16.81713 -16.56941 -16.41703 -16.21648 -16.14919 -15.65395 -15.56342 -15.43764 -15.28878 -14.91608 -14.72041 -14.60039 -14.40330 -14.24329 -14.05296 -14.01756 -13.73283 -13.70807 -13.57015 -13.39316 -13.24003 -13.17547 -12.92287 -12.47075 -12.33401 -12.25582 -12.03923 -11.84693 -11.82543 -11.70800 -11.46602 -11.28049 -10.95751 -10.78280 -10.54712 -10.17046 -10.12982 -9.95987 -9.73831 -9.22664 -4.98533 -0.10857 0.36325 0.41204 0.60091 1.24472 1.52627 1.65801 1.87747 2.11481 2.56798 2.86180 3.09162 3.18054 3.22771 3.35346 3.39806 3.54511 3.57933 3.69505 3.81949 3.85689 3.87009 3.93308 3.98393 4.05231 4.17846 4.27600 4.32029 4.33619 4.38946 4.40928 4.49618 4.52680 4.54802 4.60831 4.61460 4.65066 4.67611 4.69668 4.75419 4.85235 4.88663 4.95397 4.97233 5.00510 5.03064 5.10475 5.32608 5.33994 5.39795 5.43759 5.46865 5.52865 5.58495 5.65274 5.91038 6.05460 6.48301 6.55543 6.90540 7.23370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.080 4.080 3 Si 0.748 3.252 4 C -0.084 4.084 5 C -0.094 4.094 6 C -0.114 4.114 7 C -0.043 4.043 8 C -0.050 4.050 9 C -0.062 4.062 10 C -0.111 4.111 11 C 0.520 3.480 12 O -0.568 6.568 13 N -0.721 5.721 14 C 0.117 3.883 15 C 0.082 3.918 16 F -0.197 7.197 17 C -0.134 4.134 18 C -0.113 4.113 19 H 0.086 0.914 20 C 0.083 3.917 21 O -0.598 6.598 22 C -0.141 4.141 23 C -0.116 4.116 24 C -0.124 4.124 25 C -0.126 4.126 26 C -0.121 4.121 27 C -0.108 4.108 28 C -0.121 4.121 29 H 0.395 0.605 30 H 0.097 0.903 31 H -0.280 1.280 32 H -0.300 1.300 33 H 0.138 0.862 34 H 0.145 0.855 35 H 0.120 0.880 36 H 0.132 0.868 37 H 0.413 0.587 38 H 0.070 0.930 39 H 0.092 0.908 40 H 0.090 0.910 41 H 0.123 0.877 42 H 0.058 0.942 43 H 0.063 0.937 44 H 0.397 0.603 45 H 0.113 0.887 46 H 0.077 0.923 47 H 0.141 0.859 48 H 0.142 0.858 49 H 0.139 0.861 50 H 0.125 0.875 51 H 0.124 0.876 52 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.725 -2.918 -2.395 6.047 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.189 4.189 3 Si 0.654 3.346 4 C -0.084 4.084 5 C -0.112 4.112 6 C -0.132 4.132 7 C -0.043 4.043 8 C -0.050 4.050 9 C -0.062 4.062 10 C -0.150 4.150 11 C 0.308 3.692 12 O -0.446 6.446 13 N -0.374 5.374 14 C -0.008 4.008 15 C 0.064 3.936 16 F -0.178 7.178 17 C -0.172 4.172 18 C -0.132 4.132 19 H 0.104 0.896 20 C 0.006 3.994 21 O -0.407 6.407 22 C -0.179 4.179 23 C -0.134 4.134 24 C -0.141 4.141 25 C -0.144 4.144 26 C -0.139 4.139 27 C -0.126 4.126 28 C -0.138 4.138 29 H 0.245 0.755 30 H 0.115 0.885 31 H -0.207 1.207 32 H -0.228 1.228 33 H 0.156 0.844 34 H 0.162 0.838 35 H 0.138 0.862 36 H 0.150 0.850 37 H 0.249 0.751 38 H 0.088 0.912 39 H 0.110 0.890 40 H 0.108 0.892 41 H 0.142 0.858 42 H 0.076 0.924 43 H 0.082 0.918 44 H 0.247 0.753 45 H 0.131 0.869 46 H 0.096 0.904 47 H 0.159 0.841 48 H 0.160 0.840 49 H 0.157 0.843 50 H 0.143 0.857 51 H 0.142 0.858 52 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.312 -1.798 -1.462 4.896 hybrid contribution -0.970 -0.057 -0.685 1.189 sum 3.342 -1.856 -2.148 4.385 Atomic orbital electron populations 1.86547 1.18333 1.80615 1.51082 1.24900 0.84131 1.11299 0.98594 0.94201 0.90808 0.73045 0.76549 1.19496 0.98708 0.94593 0.95604 1.21100 0.98369 0.93804 0.97935 1.21393 0.97816 1.00700 0.93290 1.18878 0.98010 0.93304 0.94074 1.18713 0.98409 0.95482 0.92442 1.19435 0.97001 0.95034 0.94774 1.20924 0.97904 1.01357 0.94795 1.20745 0.83974 0.83306 0.81203 1.90724 1.59767 1.36127 1.58032 1.45775 1.36207 1.40981 1.14416 1.21752 0.90983 0.96128 0.91894 1.22106 0.82940 1.00507 0.88094 1.92853 1.53267 1.97323 1.74319 1.23561 0.95812 0.96748 1.01109 1.22516 0.95267 0.96426 0.98974 0.89609 1.22233 0.94295 0.86780 0.96134 1.86440 1.32012 1.44194 1.78066 1.23731 0.97873 0.96315 0.99947 1.21241 0.99632 1.00575 0.91906 1.21488 0.97725 0.96763 0.98157 1.21358 0.97865 0.96137 0.99021 1.21342 1.00476 1.00265 0.91812 1.21222 0.99628 0.94001 0.97769 1.21056 0.98995 0.99875 0.93879 0.75468 0.88536 1.20727 1.22804 0.84438 0.83776 0.86206 0.85048 0.75117 0.91171 0.88964 0.89177 0.85848 0.92365 0.91845 0.75329 0.86871 0.90379 0.84113 0.84035 0.84323 0.85721 0.85776 0.84861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.93 12.81 -148.98 -1.91 -3.83 16 2 C -0.08 -0.10 2.79 71.24 0.20 0.10 16 3 Si 0.75 0.47 29.84 68.60 2.05 2.52 16 4 C -0.08 -0.38 5.39 -19.82 -0.11 -0.49 16 5 C -0.09 -0.31 9.67 22.24 0.21 -0.10 16 6 C -0.11 -0.33 7.82 22.48 0.18 -0.15 16 7 C -0.04 -0.25 4.78 -20.04 -0.10 -0.34 16 8 C -0.05 -0.31 5.40 -20.04 -0.11 -0.42 16 9 C -0.06 -0.24 4.38 -19.65 -0.09 -0.33 16 10 C -0.11 0.12 5.31 29.10 0.15 0.27 16 11 C 0.52 1.73 7.66 87.66 0.67 2.40 16 12 O -0.57 -6.73 16.05 -3.03 -0.05 -6.78 16 13 N -0.72 1.06 5.47 -463.05 -2.53 -1.47 16 14 C 0.12 -0.22 5.35 86.38 0.46 0.24 16 15 C 0.08 -0.28 1.64 -10.27 -0.02 -0.30 16 16 F -0.20 -0.26 16.86 44.97 0.76 0.49 16 17 C -0.13 0.78 7.10 31.12 0.22 1.00 16 18 C -0.11 0.37 3.99 -10.21 -0.04 0.33 16 19 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 20 C 0.08 -0.38 6.89 71.98 0.50 0.12 16 21 O -0.60 0.43 13.66 -148.98 -2.03 -1.60 16 22 C -0.14 0.61 7.09 31.18 0.22 0.83 16 23 C -0.12 -0.30 9.66 22.24 0.21 -0.09 16 24 C -0.12 -0.31 10.04 22.31 0.22 -0.09 16 25 C -0.13 -0.46 10.03 22.24 0.22 -0.23 16 26 C -0.12 -0.71 9.62 22.48 0.22 -0.49 16 27 C -0.11 -0.73 9.62 22.48 0.22 -0.52 16 28 C -0.12 -0.65 8.65 22.24 0.19 -0.45 16 29 H 0.39 -1.85 8.74 -74.06 -0.65 -2.49 16 30 H 0.10 -0.28 7.96 -2.39 -0.02 -0.30 16 31 H -0.28 -1.07 7.11 99.48 0.71 -0.37 16 32 H -0.30 -2.45 7.05 99.48 0.70 -1.75 16 33 H 0.14 0.07 8.06 -2.91 -0.02 0.05 16 34 H 0.14 -0.19 7.11 -2.91 -0.02 -0.21 16 35 H 0.12 -0.42 4.83 -2.39 -0.01 -0.44 16 36 H 0.13 -0.89 8.01 -2.39 -0.02 -0.91 16 37 H 0.41 -2.16 8.23 -92.71 -0.76 -2.93 16 38 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 39 H 0.09 -0.25 7.98 -2.39 -0.02 -0.27 16 40 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 41 H 0.12 -1.17 8.06 -2.39 -0.02 -1.19 16 42 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 43 H 0.06 -0.47 7.85 -2.39 -0.02 -0.49 16 44 H 0.40 -3.57 9.12 -74.06 -0.68 -4.24 16 45 H 0.11 -0.75 7.75 -2.39 -0.02 -0.77 16 46 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 47 H 0.14 -0.27 8.04 -2.91 -0.02 -0.29 16 48 H 0.14 -0.27 8.06 -2.92 -0.02 -0.29 16 49 H 0.14 -0.05 8.06 -2.91 -0.02 -0.07 16 50 H 0.12 0.54 8.06 -2.91 -0.02 0.51 16 51 H 0.12 0.80 8.06 -2.91 -0.02 0.78 16 52 H 0.13 0.37 4.85 -2.91 -0.01 0.35 16 Total: 0.00 -24.63 431.25 -1.15 -25.78 By element: Atomic # 1 Polarization: -15.31 SS G_CDS: -1.08 Total: -16.39 kcal Atomic # 6 Polarization: -2.37 SS G_CDS: 3.65 Total: 1.28 kcal Atomic # 7 Polarization: 1.06 SS G_CDS: -2.53 Total: -1.47 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: -3.99 Total: -12.22 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.76 Total: 0.49 kcal Atomic # 14 Polarization: 0.47 SS G_CDS: 2.05 Total: 2.52 kcal Total: -24.63 -1.15 -25.78 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13158394.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.313 kcal (2) G-P(sol) polarization free energy of solvation -24.634 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds