Wall clock time and date at job start Sun Mar 7 2021 08:58:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86297 * 109.47249 * 2 1 4 4 C 1.50700 * 109.46917 * 120.00294 * 2 1 3 5 5 C 1.34704 * 125.66983 * 65.00034 * 4 2 1 6 6 C 1.40970 * 107.02756 * 180.02562 * 5 4 2 7 7 C 1.35935 * 106.74454 * 359.97438 * 6 5 4 8 8 C 1.47819 * 125.92772 * 179.97438 * 7 6 5 9 9 C 1.39798 * 120.00066 * 359.97438 * 8 7 6 10 10 C 1.37815 * 120.24322 * 180.02562 * 9 8 7 11 11 C 1.38772 * 120.24278 * 0.02562 * 10 9 8 12 12 O 1.35653 * 120.00249 * 179.97438 * 11 10 9 13 13 C 1.40245 * 120.00059 * 359.97438 * 11 10 9 14 14 C 1.47561 * 120.12715 * 180.02562 * 13 11 10 15 15 O 1.21586 * 119.99849 * 359.95722 * 14 13 11 16 16 N 1.34777 * 120.00641 * 179.97438 * 14 13 11 17 17 C 1.46494 * 120.00286 * 180.02562 * 16 14 13 18 18 C 1.53004 * 109.46930 * 179.97438 * 17 16 14 19 19 F 1.39896 * 112.85010 * 48.80409 * 18 17 16 20 20 C 1.53778 * 113.61278 * 179.97438 * 18 17 16 21 21 C 1.53774 * 87.08322 * 139.98038 * 20 18 17 22 22 H 1.09005 * 113.61879 * 89.11461 * 21 20 18 23 23 C 1.53000 * 113.61815 * 220.01789 * 21 20 18 24 24 O 1.42895 * 109.47407 * 184.99625 * 23 21 20 25 25 C 1.53778 * 87.08025 * 334.56676 * 21 20 18 26 26 C 1.39218 * 119.99673 * 180.02562 * 8 7 6 27 27 O 1.34350 * 125.65919 * 245.31912 * 4 2 1 28 28 H 0.96706 * 113.99705 * 299.99952 * 1 2 3 29 29 H 1.09003 * 109.46871 * 239.99558 * 2 1 3 30 30 H 1.48496 * 109.99949 * 178.68385 * 3 2 1 31 31 H 1.48497 * 109.99755 * 299.99886 * 3 2 1 32 32 H 1.07998 * 126.48678 * 0.04849 * 5 4 2 33 33 H 1.08002 * 126.62332 * 179.97438 * 6 5 4 34 34 H 1.08006 * 119.88099 * 0.02562 * 9 8 7 35 35 H 1.08003 * 119.87606 * 179.74718 * 10 9 8 36 36 H 0.96701 * 113.99769 * 89.99752 * 12 11 10 37 37 H 0.97003 * 119.99164 * 359.97438 * 16 14 13 38 38 H 1.09002 * 109.47219 * 299.99576 * 17 16 14 39 39 H 1.08995 * 109.47526 * 59.99381 * 17 16 14 40 40 H 1.09004 * 113.61593 * 254.53079 * 20 18 17 41 41 H 1.09004 * 113.61894 * 25.43277 * 20 18 17 42 42 H 1.08999 * 109.47299 * 304.99942 * 23 21 20 43 43 H 1.09004 * 109.46611 * 64.99893 * 23 21 20 44 44 H 0.96704 * 114.00497 * 179.97438 * 24 23 21 45 45 H 1.09001 * 113.61939 * 270.88219 * 25 21 20 46 46 H 1.09007 * 113.61674 * 139.97764 * 25 21 20 47 47 H 1.07997 * 120.11748 * 0.02562 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7571 -2.0168 1.5093 6 6 2.3813 -2.2610 2.7495 7 6 2.9078 -1.0778 3.1626 8 6 3.6573 -0.8527 4.4166 9 6 3.8770 -1.9139 5.2997 10 6 4.5747 -1.7096 6.4705 11 6 5.0639 -0.4488 6.7817 12 8 5.7495 -0.2530 7.9357 13 6 4.8494 0.6231 5.9031 14 6 5.3688 1.9648 6.2310 15 8 5.9834 2.1429 7.2649 16 7 5.1617 2.9931 5.3846 17 6 5.6779 4.3249 5.7099 18 6 5.3087 5.3020 4.5919 19 9 3.9584 5.2316 4.2328 20 6 5.8063 6.7361 4.8379 21 6 6.1495 6.7901 3.3399 22 1 5.3278 7.1419 2.7160 23 6 7.4714 7.4993 3.0391 24 8 7.6459 7.6017 1.6245 25 6 6.2705 5.2580 3.3928 26 6 4.1436 0.4164 4.7187 27 8 2.6221 -0.1448 2.2343 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4678 -1.2085 32 1 1.2378 -2.7402 0.8983 33 1 2.4315 -3.2056 3.2706 34 1 3.4986 -2.8976 5.0636 35 1 4.7375 -2.5328 7.1505 36 1 6.7037 -0.3866 7.8538 37 1 4.6715 2.8510 4.5597 38 1 5.2407 4.6647 6.6489 39 1 6.7623 4.2800 5.8094 40 1 5.0165 7.4282 5.1301 41 1 6.6795 6.7899 5.4881 42 1 7.4559 8.4976 3.4765 43 1 8.2955 6.9281 3.4665 44 1 8.4652 8.0422 1.3601 45 1 7.2706 4.9075 3.6479 46 1 5.8555 4.7567 2.5184 47 1 3.9738 1.2378 4.0383 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:02 Heat of formation + Delta-G solvation = -128.712644 kcal Electronic energy + Delta-G solvation = -34553.824595 eV Core-core repulsion = 29585.871792 eV Total energy + Delta-G solvation = -4967.952803 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -48.87653 -43.71707 -41.52611 -40.15314 -39.47846 -38.14746 -37.80357 -37.27413 -35.56715 -34.23239 -32.87635 -32.61640 -30.27251 -29.98545 -27.43344 -27.13046 -26.42212 -25.09307 -23.59976 -22.92083 -22.32822 -21.76620 -21.23541 -20.77151 -19.76098 -19.16337 -18.40562 -18.39763 -17.70607 -17.59312 -17.39746 -17.09482 -16.73676 -16.61830 -16.58641 -16.24991 -16.08908 -15.92188 -15.76945 -15.55195 -15.31096 -15.02061 -14.62568 -14.42919 -14.30209 -14.22919 -13.99854 -13.90659 -13.83292 -13.63295 -13.48543 -13.29930 -13.24970 -13.15359 -12.82118 -12.48790 -12.12682 -12.01270 -11.86790 -11.60533 -11.43806 -11.07378 -10.98873 -10.81287 -10.69397 -10.47732 -10.36103 -10.14290 -8.93077 -5.07779 -0.58711 -0.24952 0.75538 1.10677 1.41490 1.48032 1.73512 1.89233 1.90148 1.93119 2.60418 2.87578 2.98646 3.03635 3.07235 3.18690 3.21444 3.28800 3.38298 3.48482 3.56395 3.65503 3.85532 3.95596 3.96692 4.11226 4.13378 4.19396 4.25736 4.31919 4.34016 4.39539 4.40910 4.50387 4.53285 4.56993 4.61318 4.69943 4.74583 4.78379 4.80925 4.84088 4.98546 5.07290 5.13099 5.18748 5.28445 5.38649 5.42319 5.97135 6.34181 6.36297 6.57172 6.63986 7.13220 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.027 4.027 3 Si 0.698 3.302 4 C -0.050 4.050 5 C -0.170 4.170 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.033 4.033 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.180 3.820 12 O -0.475 6.475 13 C -0.164 4.164 14 C 0.562 3.438 15 O -0.516 6.516 16 N -0.727 5.727 17 C 0.115 3.885 18 C 0.079 3.921 19 F -0.183 7.183 20 C -0.141 4.141 21 C -0.108 4.108 22 H 0.106 0.894 23 C 0.085 3.915 24 O -0.573 6.573 25 C -0.147 4.147 26 C -0.053 4.053 27 O -0.165 6.165 28 H 0.384 0.616 29 H 0.133 0.867 30 H -0.252 1.252 31 H -0.246 1.246 32 H 0.154 0.846 33 H 0.154 0.846 34 H 0.140 0.860 35 H 0.146 0.854 36 H 0.399 0.601 37 H 0.403 0.597 38 H 0.084 0.916 39 H 0.091 0.909 40 H 0.091 0.909 41 H 0.106 0.894 42 H 0.051 0.949 43 H 0.049 0.951 44 H 0.382 0.618 45 H 0.102 0.898 46 H 0.085 0.915 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.160 0.515 -0.587 2.297 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.137 4.137 3 Si 0.598 3.402 4 C -0.100 4.100 5 C -0.189 4.189 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.033 4.033 9 C -0.070 4.070 10 C -0.167 4.167 11 C 0.133 3.867 12 O -0.287 6.287 13 C -0.168 4.168 14 C 0.350 3.650 15 O -0.392 6.392 16 N -0.380 5.380 17 C -0.009 4.009 18 C 0.060 3.940 19 F -0.163 7.163 20 C -0.179 4.179 21 C -0.127 4.127 22 H 0.124 0.876 23 C 0.008 3.992 24 O -0.379 6.379 25 C -0.185 4.185 26 C -0.072 4.072 27 O -0.062 6.062 28 H 0.232 0.768 29 H 0.150 0.850 30 H -0.176 1.176 31 H -0.170 1.170 32 H 0.172 0.828 33 H 0.172 0.828 34 H 0.158 0.842 35 H 0.164 0.836 36 H 0.258 0.742 37 H 0.239 0.761 38 H 0.102 0.898 39 H 0.109 0.891 40 H 0.109 0.891 41 H 0.124 0.876 42 H 0.069 0.931 43 H 0.068 0.932 44 H 0.229 0.771 45 H 0.120 0.880 46 H 0.103 0.897 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.117 1.076 -0.562 2.441 hybrid contribution 0.559 -0.756 -0.723 1.186 sum 2.676 0.320 -1.286 2.986 Atomic orbital electron populations 1.86564 1.16127 1.81735 1.49170 1.24396 0.85237 1.11183 0.92925 0.94267 0.81612 0.76931 0.87433 1.22913 1.01141 0.93856 0.92123 1.21567 1.03751 0.95706 0.97911 1.21857 1.02756 0.98461 0.97613 1.20264 1.03042 0.87428 0.90798 1.17572 1.00231 0.94120 0.91425 1.21133 0.95293 0.98481 0.92136 1.21396 1.00917 0.96796 0.97578 1.18585 0.93145 0.90559 0.84381 1.84756 1.23957 1.92151 1.27811 1.20230 1.05532 0.94606 0.96389 1.17957 0.79870 0.83812 0.83407 1.90842 1.40066 1.84125 1.24168 1.45750 1.58688 1.08776 1.24822 1.21803 1.00681 0.80900 0.97516 1.22073 0.78216 0.97411 0.96250 1.92883 1.33463 1.97129 1.92820 1.23548 1.02890 0.94625 0.96882 1.22513 0.98517 0.95281 0.96361 0.87624 1.22142 0.96097 0.99115 0.81890 1.86488 1.46237 1.82858 1.22308 1.23725 0.99951 0.97074 0.97727 1.21316 0.94313 0.96624 0.94933 1.83924 1.58082 1.37739 1.26493 0.76802 0.84972 1.17594 1.16973 0.82820 0.82793 0.84186 0.83601 0.74175 0.76105 0.89827 0.89133 0.89078 0.87593 0.93115 0.93239 0.77070 0.87954 0.89668 0.84648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.21 12.88 -35.23 -0.45 -0.25 16 2 C -0.03 0.02 2.98 36.01 0.11 0.12 16 3 Si 0.70 -0.60 32.11 -169.99 -5.46 -6.06 16 4 C -0.05 -0.03 6.20 -35.56 -0.22 -0.25 16 5 C -0.17 -0.11 10.78 -39.80 -0.43 -0.54 16 6 C -0.19 -0.04 10.26 -39.37 -0.40 -0.44 16 7 C 0.03 0.03 7.03 -36.49 -0.26 -0.23 16 8 C -0.03 0.00 5.87 -105.03 -0.62 -0.62 16 9 C -0.05 0.06 9.54 -39.15 -0.37 -0.31 16 10 C -0.15 0.12 9.96 -39.54 -0.39 -0.28 16 11 C 0.18 0.22 6.72 -38.63 -0.26 -0.04 16 12 O -0.48 -0.88 11.55 -40.61 -0.47 -1.35 16 13 C -0.16 -0.23 5.88 -104.90 -0.62 -0.84 16 14 C 0.56 1.44 7.76 -12.46 -0.10 1.34 16 15 O -0.52 -2.90 15.14 -16.66 -0.25 -3.15 16 16 N -0.73 -0.14 5.42 -61.34 -0.33 -0.47 16 17 C 0.12 -0.08 5.37 -4.04 -0.02 -0.10 16 18 C 0.08 -0.10 1.67 -89.81 -0.15 -0.25 16 19 F -0.18 -0.15 16.80 2.25 0.04 -0.11 16 20 C -0.14 0.35 7.09 -25.92 -0.18 0.17 16 21 C -0.11 0.15 3.99 -89.81 -0.36 -0.21 16 22 H 0.11 0.00 8.14 -51.93 -0.42 -0.43 16 23 C 0.09 -0.16 6.88 37.16 0.26 0.10 16 24 O -0.57 0.05 13.66 -35.23 -0.48 -0.43 16 25 C -0.15 0.25 7.08 -25.92 -0.18 0.06 16 26 C -0.05 -0.01 9.20 -38.78 -0.36 -0.36 16 27 O -0.16 -0.16 8.80 4.56 0.04 -0.12 16 28 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 29 H 0.13 -0.13 7.96 -51.93 -0.41 -0.55 16 30 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 31 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 32 H 0.15 -0.06 8.06 -52.49 -0.42 -0.49 16 33 H 0.15 -0.31 7.24 -52.49 -0.38 -0.69 16 34 H 0.14 -0.47 6.96 -52.48 -0.37 -0.84 16 35 H 0.15 -0.38 8.06 -52.48 -0.42 -0.80 16 36 H 0.40 -0.80 9.06 45.56 0.41 -0.38 16 37 H 0.40 -0.50 6.21 -40.82 -0.25 -0.75 16 38 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.09 -0.12 7.94 -51.93 -0.41 -0.53 16 40 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.11 -0.43 8.06 -51.93 -0.42 -0.85 16 42 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.05 -0.15 7.84 -51.93 -0.41 -0.55 16 44 H 0.38 -1.59 9.12 45.56 0.42 -1.18 16 45 H 0.10 -0.27 7.72 -51.93 -0.40 -0.67 16 46 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 47 H 0.14 -0.19 6.24 -52.49 -0.33 -0.52 16 LS Contribution 404.71 15.07 6.10 6.10 Total: 0.00 -10.91 404.71 -10.14 -21.04 By element: Atomic # 1 Polarization: -8.22 SS G_CDS: -4.31 Total: -12.53 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -4.56 Total: -2.68 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.33 Total: -0.47 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -1.62 Total: -5.29 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.04 Total: -0.11 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.46 Total: -6.06 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -10.91 -10.14 -21.04 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.669 kcal (2) G-P(sol) polarization free energy of solvation -10.905 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.043 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds