Wall clock time and date at job start Sun Mar 7 2021 08:58:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86297 * 109.47249 * 2 1 4 4 C 1.50700 * 109.46917 * 120.00294 * 2 1 3 5 5 C 1.34704 * 125.66983 * 65.00034 * 4 2 1 6 6 C 1.40970 * 107.02756 * 180.02562 * 5 4 2 7 7 C 1.35935 * 106.74454 * 359.97438 * 6 5 4 8 8 C 1.47819 * 125.92772 * 179.97438 * 7 6 5 9 9 C 1.39798 * 120.00066 * 359.97438 * 8 7 6 10 10 C 1.37815 * 120.24322 * 180.02562 * 9 8 7 11 11 C 1.38772 * 120.24278 * 0.02562 * 10 9 8 12 12 O 1.35653 * 120.00249 * 179.97438 * 11 10 9 13 13 C 1.40245 * 120.00059 * 359.97438 * 11 10 9 14 14 C 1.47561 * 120.12715 * 180.02562 * 13 11 10 15 15 O 1.21586 * 119.99849 * 359.95722 * 14 13 11 16 16 N 1.34777 * 120.00641 * 179.97438 * 14 13 11 17 17 C 1.46494 * 120.00286 * 180.02562 * 16 14 13 18 18 C 1.53004 * 109.46930 * 179.97438 * 17 16 14 19 19 F 1.39896 * 112.85010 * 48.80409 * 18 17 16 20 20 C 1.53778 * 113.61278 * 179.97438 * 18 17 16 21 21 C 1.53774 * 87.08322 * 139.98038 * 20 18 17 22 22 H 1.09005 * 113.61879 * 89.11461 * 21 20 18 23 23 C 1.53000 * 113.61815 * 220.01789 * 21 20 18 24 24 O 1.42895 * 109.47407 * 184.99625 * 23 21 20 25 25 C 1.53778 * 87.08025 * 334.56676 * 21 20 18 26 26 C 1.39218 * 119.99673 * 180.02562 * 8 7 6 27 27 O 1.34350 * 125.65919 * 245.31912 * 4 2 1 28 28 H 0.96706 * 113.99705 * 299.99952 * 1 2 3 29 29 H 1.09003 * 109.46871 * 239.99558 * 2 1 3 30 30 H 1.48496 * 109.99949 * 178.68385 * 3 2 1 31 31 H 1.48497 * 109.99755 * 299.99886 * 3 2 1 32 32 H 1.07998 * 126.48678 * 0.04849 * 5 4 2 33 33 H 1.08002 * 126.62332 * 179.97438 * 6 5 4 34 34 H 1.08006 * 119.88099 * 0.02562 * 9 8 7 35 35 H 1.08003 * 119.87606 * 179.74718 * 10 9 8 36 36 H 0.96701 * 113.99769 * 89.99752 * 12 11 10 37 37 H 0.97003 * 119.99164 * 359.97438 * 16 14 13 38 38 H 1.09002 * 109.47219 * 299.99576 * 17 16 14 39 39 H 1.08995 * 109.47526 * 59.99381 * 17 16 14 40 40 H 1.09004 * 113.61593 * 254.53079 * 20 18 17 41 41 H 1.09004 * 113.61894 * 25.43277 * 20 18 17 42 42 H 1.08999 * 109.47299 * 304.99942 * 23 21 20 43 43 H 1.09004 * 109.46611 * 64.99893 * 23 21 20 44 44 H 0.96704 * 114.00497 * 179.97438 * 24 23 21 45 45 H 1.09001 * 113.61939 * 270.88219 * 25 21 20 46 46 H 1.09007 * 113.61674 * 139.97764 * 25 21 20 47 47 H 1.07997 * 120.11748 * 0.02562 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7571 -2.0168 1.5093 6 6 2.3813 -2.2610 2.7495 7 6 2.9078 -1.0778 3.1626 8 6 3.6573 -0.8527 4.4166 9 6 3.8770 -1.9139 5.2997 10 6 4.5747 -1.7096 6.4705 11 6 5.0639 -0.4488 6.7817 12 8 5.7495 -0.2530 7.9357 13 6 4.8494 0.6231 5.9031 14 6 5.3688 1.9648 6.2310 15 8 5.9834 2.1429 7.2649 16 7 5.1617 2.9931 5.3846 17 6 5.6779 4.3249 5.7099 18 6 5.3087 5.3020 4.5919 19 9 3.9584 5.2316 4.2328 20 6 5.8063 6.7361 4.8379 21 6 6.1495 6.7901 3.3399 22 1 5.3278 7.1419 2.7160 23 6 7.4714 7.4993 3.0391 24 8 7.6459 7.6017 1.6245 25 6 6.2705 5.2580 3.3928 26 6 4.1436 0.4164 4.7187 27 8 2.6221 -0.1448 2.2343 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4678 -1.2085 32 1 1.2378 -2.7402 0.8983 33 1 2.4315 -3.2056 3.2706 34 1 3.4986 -2.8976 5.0636 35 1 4.7375 -2.5328 7.1505 36 1 6.7037 -0.3866 7.8538 37 1 4.6715 2.8510 4.5597 38 1 5.2407 4.6647 6.6489 39 1 6.7623 4.2800 5.8094 40 1 5.0165 7.4282 5.1301 41 1 6.6795 6.7899 5.4881 42 1 7.4559 8.4976 3.4765 43 1 8.2955 6.9281 3.4665 44 1 8.4652 8.0422 1.3601 45 1 7.2706 4.9075 3.6479 46 1 5.8555 4.7567 2.5184 47 1 3.9738 1.2378 4.0383 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:00 Heat of formation + Delta-G solvation = -131.689804 kcal Electronic energy + Delta-G solvation = -34553.953695 eV Core-core repulsion = 29585.871792 eV Total energy + Delta-G solvation = -4968.081902 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.140 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -48.88002 -43.70878 -41.58299 -40.08770 -39.50907 -38.12412 -37.79346 -37.19340 -35.66351 -34.22293 -32.87637 -32.57443 -30.23282 -29.94927 -27.35036 -26.98959 -26.40152 -25.07148 -23.57108 -22.91859 -22.26891 -21.78921 -21.23778 -20.67854 -19.76748 -19.16447 -18.38846 -18.28999 -17.74581 -17.57693 -17.37308 -17.06521 -16.69306 -16.60544 -16.58246 -16.19776 -16.09867 -15.96615 -15.73838 -15.55989 -15.26820 -14.94952 -14.55553 -14.45414 -14.37033 -14.23868 -13.96334 -13.88725 -13.79376 -13.52884 -13.40825 -13.22954 -13.20053 -13.12766 -12.77895 -12.39036 -12.25560 -11.94424 -11.87662 -11.51296 -11.34865 -11.06786 -10.95901 -10.81840 -10.67371 -10.50025 -10.37291 -10.15480 -8.91790 -5.05208 -0.57298 -0.23134 0.76270 1.13898 1.41594 1.48424 1.73706 1.83105 1.87303 1.90134 2.60935 3.01777 3.09223 3.10522 3.13707 3.23298 3.32765 3.38045 3.48454 3.54162 3.64265 3.81129 3.88987 4.00848 4.05143 4.19398 4.22574 4.30486 4.34509 4.39050 4.44083 4.53159 4.58770 4.61622 4.63315 4.66852 4.70537 4.78418 4.83264 4.87179 4.89014 4.97404 5.01102 5.12589 5.18671 5.19637 5.36617 5.43670 5.50048 5.98532 6.28134 6.59844 6.72550 6.87309 7.01542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.024 4.024 3 Si 0.765 3.235 4 C -0.057 4.057 5 C -0.182 4.182 6 C -0.188 4.188 7 C 0.022 3.978 8 C -0.042 4.042 9 C -0.043 4.043 10 C -0.145 4.145 11 C 0.166 3.834 12 O -0.493 6.493 13 C -0.180 4.180 14 C 0.560 3.440 15 O -0.554 6.554 16 N -0.719 5.719 17 C 0.115 3.885 18 C 0.078 3.922 19 F -0.197 7.197 20 C -0.132 4.132 21 C -0.113 4.113 22 H 0.087 0.913 23 C 0.083 3.917 24 O -0.599 6.599 25 C -0.144 4.144 26 C -0.053 4.053 27 O -0.173 6.173 28 H 0.399 0.601 29 H 0.137 0.863 30 H -0.289 1.289 31 H -0.280 1.280 32 H 0.162 0.838 33 H 0.176 0.824 34 H 0.166 0.834 35 H 0.166 0.834 36 H 0.411 0.589 37 H 0.409 0.591 38 H 0.075 0.925 39 H 0.100 0.900 40 H 0.090 0.910 41 H 0.126 0.874 42 H 0.060 0.940 43 H 0.064 0.936 44 H 0.397 0.603 45 H 0.115 0.885 46 H 0.075 0.925 47 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.143 -0.345 -0.462 2.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.134 4.134 3 Si 0.669 3.331 4 C -0.107 4.107 5 C -0.201 4.201 6 C -0.207 4.207 7 C -0.028 4.028 8 C -0.042 4.042 9 C -0.061 4.061 10 C -0.163 4.163 11 C 0.120 3.880 12 O -0.307 6.307 13 C -0.184 4.184 14 C 0.348 3.652 15 O -0.433 6.433 16 N -0.372 5.372 17 C -0.009 4.009 18 C 0.059 3.941 19 F -0.177 7.177 20 C -0.170 4.170 21 C -0.131 4.131 22 H 0.105 0.895 23 C 0.006 3.994 24 O -0.408 6.408 25 C -0.182 4.182 26 C -0.072 4.072 27 O -0.071 6.071 28 H 0.250 0.750 29 H 0.154 0.846 30 H -0.215 1.215 31 H -0.206 1.206 32 H 0.180 0.820 33 H 0.193 0.807 34 H 0.184 0.816 35 H 0.184 0.816 36 H 0.272 0.728 37 H 0.246 0.754 38 H 0.094 0.906 39 H 0.118 0.882 40 H 0.109 0.891 41 H 0.144 0.856 42 H 0.078 0.922 43 H 0.082 0.918 44 H 0.247 0.753 45 H 0.133 0.867 46 H 0.093 0.907 47 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 2.086 0.231 -0.447 2.146 hybrid contribution 0.570 -0.482 -0.820 1.109 sum 2.656 -0.252 -1.267 2.954 Atomic orbital electron populations 1.86531 1.16018 1.82090 1.50326 1.24407 0.85345 1.10917 0.92772 0.93418 0.78451 0.75704 0.85523 1.23112 1.01150 0.94166 0.92257 1.21798 1.04002 0.95899 0.98373 1.22156 1.02015 0.99091 0.97440 1.20464 1.03557 0.87722 0.91017 1.17705 1.00426 0.94441 0.91611 1.21433 0.94160 0.99225 0.91332 1.21590 1.00297 0.96489 0.97973 1.18854 0.93536 0.91354 0.84276 1.84709 1.25143 1.92402 1.28452 1.20226 1.06674 0.94211 0.97262 1.18204 0.79370 0.84585 0.83059 1.90810 1.42005 1.84778 1.25710 1.45746 1.58049 1.08779 1.24607 1.21870 1.01145 0.80487 0.97369 1.22166 0.77522 0.98156 0.96234 1.92852 1.34669 1.97240 1.92955 1.23560 1.03538 0.93413 0.96462 1.22487 0.98421 0.95406 0.96829 0.89488 1.22233 0.96091 0.99812 0.81278 1.86443 1.47605 1.83313 1.23401 1.23743 1.00364 0.96968 0.97095 1.21387 0.93981 0.97215 0.94585 1.83908 1.58298 1.38155 1.26749 0.75041 0.84590 1.21507 1.20640 0.82024 0.80661 0.81609 0.81645 0.72808 0.75361 0.90649 0.88195 0.89119 0.85554 0.92208 0.91766 0.75315 0.86674 0.90650 0.83880 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.66 12.88 -148.98 -1.92 -1.26 16 2 C -0.02 0.03 2.98 71.24 0.21 0.24 16 3 Si 0.76 -0.69 32.11 68.60 2.20 1.51 16 4 C -0.06 -0.05 6.20 24.87 0.15 0.10 16 5 C -0.18 -0.10 10.78 22.13 0.24 0.14 16 6 C -0.19 0.14 10.26 22.40 0.23 0.37 16 7 C 0.02 0.02 7.03 24.27 0.17 0.19 16 8 C -0.04 0.01 5.87 -20.13 -0.12 -0.11 16 9 C -0.04 0.16 9.54 22.55 0.22 0.37 16 10 C -0.15 0.34 9.96 22.30 0.22 0.56 16 11 C 0.17 0.48 6.72 22.89 0.15 0.63 16 12 O -0.49 -2.30 11.55 -68.70 -0.79 -3.09 16 13 C -0.18 -0.66 5.88 -20.04 -0.12 -0.78 16 14 C 0.56 3.60 7.76 86.70 0.67 4.28 16 15 O -0.55 -7.11 15.14 17.00 0.26 -6.85 16 16 N -0.72 -1.02 5.42 -466.25 -2.53 -3.55 16 17 C 0.12 -0.08 5.37 86.38 0.46 0.39 16 18 C 0.08 -0.16 1.67 -10.27 -0.02 -0.18 16 19 F -0.20 -0.52 16.80 44.97 0.76 0.23 16 20 C -0.13 0.67 7.09 31.12 0.22 0.89 16 21 C -0.11 0.27 3.99 -10.27 -0.04 0.23 16 22 H 0.09 0.12 8.14 -2.38 -0.02 0.10 16 23 C 0.08 -0.33 6.88 71.98 0.50 0.16 16 24 O -0.60 -0.01 13.66 -148.98 -2.03 -2.05 16 25 C -0.14 0.42 7.08 31.12 0.22 0.64 16 26 C -0.05 -0.04 9.20 22.79 0.21 0.17 16 27 O -0.17 -0.34 8.80 -6.61 -0.06 -0.40 16 28 H 0.40 -3.43 8.70 -74.05 -0.64 -4.08 16 29 H 0.14 -0.29 7.96 -2.39 -0.02 -0.31 16 30 H -0.29 -1.49 7.11 99.48 0.71 -0.78 16 31 H -0.28 -1.32 7.11 99.48 0.71 -0.61 16 32 H 0.16 -0.27 8.06 -2.91 -0.02 -0.29 16 33 H 0.18 -1.07 7.24 -2.91 -0.02 -1.09 16 34 H 0.17 -1.52 6.96 -2.91 -0.02 -1.54 16 35 H 0.17 -1.11 8.06 -2.91 -0.02 -1.13 16 36 H 0.41 -1.14 9.06 -74.06 -0.67 -1.81 16 37 H 0.41 -0.57 6.21 -92.71 -0.58 -1.15 16 38 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 39 H 0.10 -0.24 7.94 -2.39 -0.02 -0.26 16 40 H 0.09 -0.42 8.14 -2.38 -0.02 -0.44 16 41 H 0.13 -1.16 8.06 -2.38 -0.02 -1.18 16 42 H 0.06 -0.36 8.14 -2.39 -0.02 -0.37 16 43 H 0.06 -0.45 7.84 -2.39 -0.02 -0.47 16 44 H 0.40 -3.29 9.12 -74.05 -0.68 -3.97 16 45 H 0.11 -0.64 7.72 -2.39 -0.02 -0.66 16 46 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 47 H 0.14 -0.28 6.24 -2.91 -0.02 -0.30 16 Total: 0.00 -25.52 404.71 -1.98 -27.50 By element: Atomic # 1 Polarization: -18.90 SS G_CDS: -1.45 Total: -20.35 kcal Atomic # 6 Polarization: 4.72 SS G_CDS: 3.59 Total: 8.31 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -2.53 Total: -3.55 kcal Atomic # 8 Polarization: -9.11 SS G_CDS: -4.55 Total: -13.66 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.76 Total: 0.23 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: 2.20 Total: 1.51 kcal Total: -25.52 -1.98 -27.50 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.190 kcal (2) G-P(sol) polarization free energy of solvation -25.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.710 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.980 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds