Wall clock time and date at job start Sun Mar 7 2021 08:58:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47530 * 2 1 4 4 C 1.50706 * 109.47147 * 239.99765 * 2 1 3 5 5 C 1.38581 * 120.32260 * 299.73222 * 4 2 1 6 6 C 1.38639 * 118.48345 * 179.71200 * 5 4 2 7 7 C 1.39267 * 119.06039 * 0.57477 * 6 5 4 8 8 C 1.48172 * 119.72109 * 179.70684 * 7 6 5 9 9 O 1.21513 * 119.99667 * 359.97436 * 8 7 6 10 10 N 1.34778 * 119.99969 * 179.97438 * 8 7 6 11 11 C 1.46491 * 119.99937 * 179.97438 * 10 8 7 12 12 C 1.52996 * 109.47232 * 179.97438 * 11 10 8 13 13 F 1.39894 * 112.85144 * 316.19930 * 12 11 10 14 14 C 1.53787 * 113.61290 * 87.50423 * 12 11 10 15 15 C 1.53778 * 87.08101 * 139.98447 * 14 12 11 16 16 H 1.08996 * 113.62023 * 89.11511 * 15 14 12 17 17 C 1.53001 * 113.61351 * 220.01828 * 15 14 12 18 18 O 1.42895 * 109.47358 * 272.49458 * 17 15 14 19 19 C 1.53782 * 87.08293 * 334.56572 * 15 14 12 20 20 N 1.32746 * 120.55427 * 359.68136 * 7 6 5 21 21 C 1.31488 * 121.64378 * 0.02733 * 20 7 6 22 22 H 0.96700 * 113.99916 * 299.99932 * 1 2 3 23 23 H 1.09001 * 109.46798 * 120.00155 * 2 1 3 24 24 H 1.48496 * 110.00167 * 178.67868 * 3 2 1 25 25 H 1.48501 * 110.00040 * 299.99994 * 3 2 1 26 26 H 1.08000 * 120.75999 * 359.96837 * 5 4 2 27 27 H 1.07997 * 120.46573 * 180.25705 * 6 5 4 28 28 H 0.97001 * 119.99508 * 359.97438 * 10 8 7 29 29 H 1.09008 * 109.47585 * 300.00041 * 11 10 8 30 30 H 1.08999 * 109.47541 * 59.99891 * 11 10 8 31 31 H 1.08999 * 113.61349 * 254.53136 * 14 12 11 32 32 H 1.08993 * 113.61469 * 25.43264 * 14 12 11 33 33 H 1.09002 * 109.47248 * 32.49566 * 17 15 14 34 34 H 1.09006 * 109.47203 * 152.49421 * 17 15 14 35 35 H 0.96702 * 114.00429 * 180.02562 * 18 17 15 36 36 H 1.08991 * 113.61581 * 270.88799 * 19 15 14 37 37 H 1.08999 * 113.69425 * 139.99071 * 19 15 14 38 38 H 1.08007 * 119.54720 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6052 -2.0388 -1.4536 6 6 2.0829 -2.6532 -2.6009 7 6 2.8795 -1.9217 -3.4784 8 6 3.4032 -2.5657 -4.7057 9 8 3.1376 -3.7275 -4.9429 10 7 4.1742 -1.8629 -5.5590 11 6 4.6925 -2.4998 -6.7722 12 6 5.5306 -1.4907 -7.5597 13 9 4.9305 -0.2294 -7.6377 14 6 7.0066 -1.4472 -7.1301 15 6 7.3554 -1.3147 -8.6219 16 1 7.3879 -0.2833 -8.9729 17 6 8.5850 -2.1245 -9.0381 18 8 9.7626 -1.3410 -8.8345 19 6 6.0227 -2.0236 -8.9158 20 7 3.1730 -0.6522 -3.2246 21 6 2.7286 -0.0434 -2.1472 22 1 -0.3933 0.4417 0.7651 23 1 1.7922 -0.5139 0.8900 24 1 3.5346 1.7701 0.0322 25 1 1.5616 2.4678 -1.2085 26 1 0.9895 -2.5818 -0.7518 27 1 1.8449 -3.6859 -2.8087 28 1 4.3859 -0.9353 -5.3698 29 1 5.3133 -3.3528 -6.4980 30 1 3.8600 -2.8395 -7.3883 31 1 7.2642 -0.5667 -6.5416 32 1 7.3579 -2.3758 -6.6803 33 1 8.6436 -3.0314 -8.4363 34 1 8.5043 -2.3921 -10.0917 35 1 10.5824 -1.7923 -9.0782 36 1 6.1051 -3.1097 -8.9541 37 1 5.4850 -1.6095 -9.7687 38 1 2.9880 0.9907 -1.9745 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:08 Heat of formation + Delta-G solvation = -95.549785 kcal Electronic energy + Delta-G solvation = -23450.369336 eV Core-core repulsion = 19596.009096 eV Total energy + Delta-G solvation = -3854.360240 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -48.83861 -41.84877 -40.36197 -39.75201 -37.93078 -37.26920 -35.67463 -33.95630 -33.06835 -30.47636 -28.19254 -27.18287 -26.74865 -25.06577 -23.68859 -22.30319 -21.79575 -20.78349 -19.42876 -18.70479 -18.38013 -18.17938 -17.39381 -17.02110 -16.82666 -16.63073 -16.46531 -16.23030 -16.01436 -15.62872 -15.44723 -15.13357 -14.85984 -14.79961 -14.34573 -14.14296 -14.01100 -13.95357 -13.76760 -13.53463 -13.27365 -12.58090 -12.44879 -12.15118 -11.98740 -11.63653 -11.40883 -11.38361 -11.08826 -10.95775 -10.78362 -10.56092 -10.29331 -10.10093 -5.13014 -0.58824 0.03743 1.08595 1.49219 1.61443 1.81370 1.89525 2.64456 2.84850 2.92451 3.02109 3.09134 3.15999 3.25217 3.42255 3.50237 3.64223 3.68034 3.73105 3.87056 4.14128 4.16608 4.21483 4.22166 4.34028 4.41132 4.44371 4.47829 4.50535 4.56232 4.73029 4.81239 4.84797 4.86577 4.93703 5.21171 5.30409 5.33441 6.25848 6.42375 6.58186 6.59999 7.07391 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.072 4.072 3 Si 0.684 3.316 4 C -0.104 4.104 5 C -0.050 4.050 6 C -0.105 4.105 7 C 0.078 3.922 8 C 0.576 3.424 9 O -0.528 6.528 10 N -0.709 5.709 11 C 0.111 3.889 12 C 0.080 3.920 13 F -0.182 7.182 14 C -0.146 4.146 15 C -0.108 4.108 16 H 0.105 0.895 17 C 0.086 3.914 18 O -0.573 6.573 19 C -0.142 4.142 20 N -0.451 5.451 21 C 0.099 3.901 22 H 0.387 0.613 23 H 0.083 0.917 24 H -0.250 1.250 25 H -0.245 1.245 26 H 0.150 0.850 27 H 0.155 0.845 28 H 0.416 0.584 29 H 0.092 0.908 30 H 0.084 0.916 31 H 0.085 0.915 32 H 0.102 0.898 33 H 0.050 0.950 34 H 0.051 0.949 35 H 0.382 0.618 36 H 0.106 0.894 37 H 0.090 0.910 38 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.985 0.304 3.743 3.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.183 4.183 3 Si 0.585 3.415 4 C -0.106 4.106 5 C -0.076 4.076 6 C -0.126 4.126 7 C -0.060 4.060 8 C 0.360 3.640 9 O -0.403 6.403 10 N -0.361 5.361 11 C -0.013 4.013 12 C 0.061 3.939 13 F -0.163 7.163 14 C -0.184 4.184 15 C -0.127 4.127 16 H 0.123 0.877 17 C 0.008 3.992 18 O -0.379 6.379 19 C -0.180 4.180 20 N -0.162 5.162 21 C -0.061 4.061 22 H 0.235 0.765 23 H 0.101 0.899 24 H -0.174 1.174 25 H -0.170 1.170 26 H 0.168 0.832 27 H 0.173 0.827 28 H 0.253 0.747 29 H 0.110 0.890 30 H 0.103 0.897 31 H 0.104 0.896 32 H 0.121 0.879 33 H 0.068 0.932 34 H 0.069 0.931 35 H 0.229 0.771 36 H 0.124 0.876 37 H 0.109 0.891 38 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 1.458 0.642 2.134 2.663 hybrid contribution -0.082 -0.806 0.340 0.878 sum 1.375 -0.164 2.474 2.835 Atomic orbital electron populations 1.86479 1.16669 1.81947 1.50012 1.24629 0.86203 1.10785 0.96685 0.94959 0.80975 0.77660 0.87936 1.20663 0.98094 0.95299 0.96524 1.21543 0.96062 0.93558 0.96421 1.22232 0.95032 1.02154 0.93143 1.21106 0.98221 0.90643 0.96009 1.17795 0.78405 0.85551 0.82206 1.90818 1.58522 1.15989 1.75017 1.45656 1.51260 1.16775 1.22422 1.21892 0.98642 0.95128 0.85620 1.22067 0.92854 0.80434 0.98514 1.92884 1.84852 1.41532 1.96995 1.23730 0.92561 1.04627 0.97465 1.22508 0.92805 1.01248 0.96107 0.87661 1.22140 0.84757 0.92897 0.99412 1.86491 1.16637 1.45115 1.89638 1.23560 0.95849 1.02238 0.96321 1.67499 1.20447 1.09216 1.19010 1.22421 0.95034 0.99258 0.89391 0.76468 0.89942 1.17412 1.16965 0.83190 0.82710 0.74698 0.88960 0.89741 0.89594 0.87946 0.93211 0.93126 0.77079 0.87564 0.89118 0.82760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.69 12.76 -35.23 -0.45 0.24 16 2 C -0.07 0.11 2.82 36.01 0.10 0.21 16 3 Si 0.68 -1.61 29.82 -169.99 -5.07 -6.67 16 4 C -0.10 -0.14 5.44 -104.36 -0.57 -0.70 16 5 C -0.05 -0.05 9.77 -39.31 -0.38 -0.44 16 6 C -0.10 -0.23 9.63 -39.05 -0.38 -0.61 16 7 C 0.08 0.29 6.75 -83.01 -0.56 -0.27 16 8 C 0.58 2.43 7.81 -12.18 -0.10 2.33 16 9 O -0.53 -3.39 16.32 5.35 0.09 -3.30 16 10 N -0.71 -1.63 5.44 -61.15 -0.33 -1.96 16 11 C 0.11 0.06 5.42 -4.05 -0.02 0.04 16 12 C 0.08 0.00 1.74 -89.80 -0.16 -0.16 16 13 F -0.18 -0.47 16.58 2.25 0.04 -0.43 16 14 C -0.15 0.08 7.08 -25.92 -0.18 -0.11 16 15 C -0.11 0.06 3.99 -89.81 -0.36 -0.30 16 16 H 0.11 0.10 8.14 -51.93 -0.42 -0.32 16 17 C 0.09 -0.10 6.88 37.16 0.26 0.15 16 18 O -0.57 -0.28 13.66 -35.23 -0.48 -0.76 16 19 C -0.14 0.23 7.10 -25.92 -0.18 0.05 16 20 N -0.45 -1.64 9.54 -9.80 -0.09 -1.73 16 21 C 0.10 0.24 9.84 -17.57 -0.17 0.07 16 22 H 0.39 -2.42 8.74 45.56 0.40 -2.03 16 23 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 24 H -0.25 0.01 7.11 56.52 0.40 0.41 16 25 H -0.25 -0.24 7.11 56.52 0.40 0.17 16 26 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 27 H 0.16 0.20 7.64 -52.49 -0.40 -0.20 16 28 H 0.42 0.85 7.36 -40.82 -0.30 0.55 16 29 H 0.09 -0.03 7.85 -51.92 -0.41 -0.44 16 30 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.10 -0.17 7.65 -51.93 -0.40 -0.57 16 33 H 0.05 -0.12 7.84 -51.93 -0.41 -0.53 16 34 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.38 -1.42 9.12 45.56 0.42 -1.01 16 36 H 0.11 -0.36 8.06 -51.93 -0.42 -0.78 16 37 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 38 H 0.16 0.20 4.89 -52.48 -0.26 -0.06 16 LS Contribution 328.48 15.07 4.95 4.95 Total: 0.00 -9.36 328.48 -7.97 -17.34 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -3.92 Total: -7.92 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: -2.70 Total: 0.26 kcal Atomic # 7 Polarization: -3.27 SS G_CDS: -0.43 Total: -3.69 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.84 Total: -3.83 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.07 Total: -6.67 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -9.36 -7.97 -17.34 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.213 kcal (2) G-P(sol) polarization free energy of solvation -9.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.576 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds