Wall clock time and date at job start Sun Mar 7 2021 08:58:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47530 * 2 1 4 4 C 1.50706 * 109.47147 * 239.99765 * 2 1 3 5 5 C 1.38581 * 120.32260 * 299.73222 * 4 2 1 6 6 C 1.38639 * 118.48345 * 179.71200 * 5 4 2 7 7 C 1.39267 * 119.06039 * 0.57477 * 6 5 4 8 8 C 1.48172 * 119.72109 * 179.70684 * 7 6 5 9 9 O 1.21513 * 119.99667 * 359.97436 * 8 7 6 10 10 N 1.34778 * 119.99969 * 179.97438 * 8 7 6 11 11 C 1.46491 * 119.99937 * 179.97438 * 10 8 7 12 12 C 1.52996 * 109.47232 * 179.97438 * 11 10 8 13 13 F 1.39894 * 112.85144 * 316.19930 * 12 11 10 14 14 C 1.53787 * 113.61290 * 87.50423 * 12 11 10 15 15 C 1.53778 * 87.08101 * 139.98447 * 14 12 11 16 16 H 1.08996 * 113.62023 * 89.11511 * 15 14 12 17 17 C 1.53001 * 113.61351 * 220.01828 * 15 14 12 18 18 O 1.42895 * 109.47358 * 272.49458 * 17 15 14 19 19 C 1.53782 * 87.08293 * 334.56572 * 15 14 12 20 20 N 1.32746 * 120.55427 * 359.68136 * 7 6 5 21 21 C 1.31488 * 121.64378 * 0.02733 * 20 7 6 22 22 H 0.96700 * 113.99916 * 299.99932 * 1 2 3 23 23 H 1.09001 * 109.46798 * 120.00155 * 2 1 3 24 24 H 1.48496 * 110.00167 * 178.67868 * 3 2 1 25 25 H 1.48501 * 110.00040 * 299.99994 * 3 2 1 26 26 H 1.08000 * 120.75999 * 359.96837 * 5 4 2 27 27 H 1.07997 * 120.46573 * 180.25705 * 6 5 4 28 28 H 0.97001 * 119.99508 * 359.97438 * 10 8 7 29 29 H 1.09008 * 109.47585 * 300.00041 * 11 10 8 30 30 H 1.08999 * 109.47541 * 59.99891 * 11 10 8 31 31 H 1.08999 * 113.61349 * 254.53136 * 14 12 11 32 32 H 1.08993 * 113.61469 * 25.43264 * 14 12 11 33 33 H 1.09002 * 109.47248 * 32.49566 * 17 15 14 34 34 H 1.09006 * 109.47203 * 152.49421 * 17 15 14 35 35 H 0.96702 * 114.00429 * 180.02562 * 18 17 15 36 36 H 1.08991 * 113.61581 * 270.88799 * 19 15 14 37 37 H 1.08999 * 113.69425 * 139.99071 * 19 15 14 38 38 H 1.08007 * 119.54720 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6052 -2.0388 -1.4536 6 6 2.0829 -2.6532 -2.6009 7 6 2.8795 -1.9217 -3.4784 8 6 3.4032 -2.5657 -4.7057 9 8 3.1376 -3.7275 -4.9429 10 7 4.1742 -1.8629 -5.5590 11 6 4.6925 -2.4998 -6.7722 12 6 5.5306 -1.4907 -7.5597 13 9 4.9305 -0.2294 -7.6377 14 6 7.0066 -1.4472 -7.1301 15 6 7.3554 -1.3147 -8.6219 16 1 7.3879 -0.2833 -8.9729 17 6 8.5850 -2.1245 -9.0381 18 8 9.7626 -1.3410 -8.8345 19 6 6.0227 -2.0236 -8.9158 20 7 3.1730 -0.6522 -3.2246 21 6 2.7286 -0.0434 -2.1472 22 1 -0.3933 0.4417 0.7651 23 1 1.7922 -0.5139 0.8900 24 1 3.5346 1.7701 0.0322 25 1 1.5616 2.4678 -1.2085 26 1 0.9895 -2.5818 -0.7518 27 1 1.8449 -3.6859 -2.8087 28 1 4.3859 -0.9353 -5.3698 29 1 5.3133 -3.3528 -6.4980 30 1 3.8600 -2.8395 -7.3883 31 1 7.2642 -0.5667 -6.5416 32 1 7.3579 -2.3758 -6.6803 33 1 8.6436 -3.0314 -8.4363 34 1 8.5043 -2.3921 -10.0917 35 1 10.5824 -1.7923 -9.0782 36 1 6.1051 -3.1097 -8.9541 37 1 5.4850 -1.6095 -9.7687 38 1 2.9880 0.9907 -1.9745 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:07 Heat of formation + Delta-G solvation = -100.212192 kcal Electronic energy + Delta-G solvation = -23450.571513 eV Core-core repulsion = 19596.009096 eV Total energy + Delta-G solvation = -3854.562417 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.96159 -42.01792 -40.51554 -39.79209 -37.81804 -37.24652 -35.86699 -34.03823 -33.20609 -30.52368 -28.20453 -27.12647 -26.72558 -25.20168 -23.74349 -22.31951 -21.98864 -20.76081 -19.59525 -18.65275 -18.32314 -18.21050 -17.45019 -17.10248 -16.91328 -16.70668 -16.55305 -16.34254 -16.12949 -15.69233 -15.41902 -15.17825 -14.90953 -14.88716 -14.41650 -14.23104 -14.04504 -13.97386 -13.83854 -13.45037 -13.26216 -12.56768 -12.43409 -12.13284 -11.97498 -11.77315 -11.46716 -11.40768 -11.19636 -10.94811 -10.84087 -10.65587 -10.38433 -10.16222 -4.97613 -0.74724 -0.09355 1.22926 1.37167 1.64107 1.73428 1.94080 2.48104 2.71881 2.98091 3.04726 3.09873 3.21487 3.28949 3.40608 3.48627 3.57762 3.70325 3.77291 3.83175 4.10955 4.18574 4.28882 4.31027 4.37821 4.46105 4.47344 4.55373 4.57927 4.66636 4.73078 4.79132 4.83529 4.86204 4.93033 5.07960 5.22862 5.31996 6.03412 6.38927 6.81704 6.86797 6.87034 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.074 4.074 3 Si 0.771 3.229 4 C -0.108 4.108 5 C -0.048 4.048 6 C -0.107 4.107 7 C 0.056 3.944 8 C 0.573 3.427 9 O -0.556 6.556 10 N -0.704 5.704 11 C 0.110 3.890 12 C 0.075 3.925 13 F -0.201 7.201 14 C -0.144 4.144 15 C -0.112 4.112 16 H 0.084 0.916 17 C 0.084 3.916 18 O -0.599 6.599 19 C -0.129 4.129 20 N -0.466 5.466 21 C 0.080 3.920 22 H 0.409 0.591 23 H 0.112 0.888 24 H -0.282 1.282 25 H -0.296 1.296 26 H 0.175 0.825 27 H 0.161 0.839 28 H 0.416 0.584 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.071 0.929 32 H 0.118 0.882 33 H 0.066 0.934 34 H 0.061 0.939 35 H 0.398 0.602 36 H 0.130 0.870 37 H 0.090 0.910 38 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.745 -0.500 4.735 4.819 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.184 4.184 3 Si 0.677 3.323 4 C -0.110 4.110 5 C -0.073 4.073 6 C -0.128 4.128 7 C -0.081 4.081 8 C 0.359 3.641 9 O -0.435 6.435 10 N -0.355 5.355 11 C -0.013 4.013 12 C 0.056 3.944 13 F -0.181 7.181 14 C -0.181 4.181 15 C -0.131 4.131 16 H 0.103 0.897 17 C 0.007 3.993 18 O -0.408 6.408 19 C -0.167 4.167 20 N -0.177 5.177 21 C -0.079 4.079 22 H 0.261 0.739 23 H 0.130 0.870 24 H -0.209 1.209 25 H -0.224 1.224 26 H 0.193 0.807 27 H 0.179 0.821 28 H 0.253 0.747 29 H 0.123 0.877 30 H 0.100 0.900 31 H 0.090 0.910 32 H 0.136 0.864 33 H 0.084 0.916 34 H 0.080 0.920 35 H 0.248 0.752 36 H 0.148 0.852 37 H 0.109 0.891 38 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 1.221 -0.154 3.145 3.377 hybrid contribution 0.001 -0.482 0.026 0.482 sum 1.223 -0.635 3.171 3.458 Atomic orbital electron populations 1.86427 1.16462 1.82520 1.51806 1.24711 0.86491 1.10940 0.96282 0.94066 0.77688 0.75333 0.85209 1.21046 0.97181 0.95637 0.97119 1.21844 0.95726 0.93529 0.96232 1.22400 0.94620 1.02429 0.93362 1.21148 0.99491 0.90991 0.96470 1.17951 0.78335 0.85303 0.82553 1.90786 1.59842 1.17010 1.75813 1.45717 1.50528 1.16694 1.22587 1.22032 0.98813 0.95554 0.84932 1.22239 0.92800 0.79555 0.99797 1.92844 1.85239 1.42898 1.97144 1.23756 0.92084 1.04760 0.97514 1.22472 0.94045 1.00558 0.96002 0.89742 1.22226 0.83787 0.92919 1.00386 1.86445 1.17953 1.46481 1.89945 1.23568 0.94596 1.03503 0.95068 1.67426 1.21077 1.09435 1.19780 1.22656 0.95858 0.99665 0.89755 0.73875 0.87026 1.20934 1.22365 0.80721 0.82121 0.74701 0.87657 0.89950 0.90998 0.86412 0.91581 0.92050 0.75237 0.85154 0.89136 0.82492 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.39 12.76 -148.98 -1.90 0.48 16 2 C -0.07 0.33 2.82 71.24 0.20 0.53 16 3 Si 0.77 -3.70 29.82 68.60 2.05 -1.66 16 4 C -0.11 -0.26 5.44 -19.69 -0.11 -0.36 16 5 C -0.05 -0.07 9.77 22.45 0.22 0.15 16 6 C -0.11 -0.54 9.63 22.61 0.22 -0.32 16 7 C 0.06 0.49 6.75 41.89 0.28 0.78 16 8 C 0.57 5.69 7.81 86.88 0.68 6.37 16 9 O -0.56 -7.87 16.32 -3.76 -0.06 -7.93 16 10 N -0.70 -4.25 5.44 -465.67 -2.53 -6.78 16 11 C 0.11 0.19 5.42 86.38 0.47 0.66 16 12 C 0.07 0.05 1.74 -10.27 -0.02 0.03 16 13 F -0.20 -1.37 16.58 44.97 0.75 -0.62 16 14 C -0.14 0.07 7.08 31.12 0.22 0.29 16 15 C -0.11 0.07 3.99 -10.27 -0.04 0.03 16 16 H 0.08 0.29 8.14 -2.39 -0.02 0.27 16 17 C 0.08 -0.25 6.88 71.98 0.50 0.25 16 18 O -0.60 -0.62 13.66 -148.98 -2.03 -2.66 16 19 C -0.13 0.46 7.10 31.12 0.22 0.68 16 20 N -0.47 -4.14 9.54 -184.91 -1.76 -5.91 16 21 C 0.08 0.49 9.84 84.83 0.83 1.32 16 22 H 0.41 -6.02 8.74 -74.06 -0.65 -6.66 16 23 H 0.11 -1.09 7.96 -2.39 -0.02 -1.11 16 24 H -0.28 -0.14 7.11 99.48 0.71 0.56 16 25 H -0.30 -1.04 7.11 99.48 0.71 -0.33 16 26 H 0.18 -0.69 8.06 -2.91 -0.02 -0.71 16 27 H 0.16 0.51 7.64 -2.91 -0.02 0.49 16 28 H 0.42 2.49 7.36 -92.71 -0.68 1.81 16 29 H 0.11 -0.09 7.85 -2.38 -0.02 -0.11 16 30 H 0.08 0.19 8.14 -2.39 -0.02 0.17 16 31 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 32 H 0.12 -0.44 7.65 -2.39 -0.02 -0.46 16 33 H 0.07 -0.41 7.84 -2.39 -0.02 -0.43 16 34 H 0.06 -0.32 8.14 -2.38 -0.02 -0.34 16 35 H 0.40 -3.02 9.12 -74.06 -0.68 -3.69 16 36 H 0.13 -1.09 8.06 -2.39 -0.02 -1.11 16 37 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 38 H 0.16 0.66 4.89 -2.91 -0.01 0.64 16 Total: 0.00 -23.16 328.48 -2.67 -25.84 By element: Atomic # 1 Polarization: -10.31 SS G_CDS: -0.84 Total: -11.16 kcal Atomic # 6 Polarization: 6.72 SS G_CDS: 3.67 Total: 10.40 kcal Atomic # 7 Polarization: -8.39 SS G_CDS: -4.30 Total: -12.69 kcal Atomic # 8 Polarization: -6.11 SS G_CDS: -4.00 Total: -10.11 kcal Atomic # 9 Polarization: -1.37 SS G_CDS: 0.75 Total: -0.62 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.05 Total: -1.66 kcal Total: -23.16 -2.67 -25.84 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.376 kcal (2) G-P(sol) polarization free energy of solvation -23.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.671 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds