Wall clock time and date at job start Sun Mar 7 2021 08:58:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38980 * 119.95774 * 2 1 4 4 O 1.35708 * 119.91146 * 359.97438 * 3 2 1 5 5 C 1.39016 * 120.17425 * 180.25535 * 3 2 1 6 6 C 1.50696 * 119.95690 * 179.72573 * 5 3 2 7 7 O 1.42903 * 109.47131 * 74.72305 * 6 5 3 8 8 Si 1.86292 * 109.47450 * 194.72641 * 6 5 3 9 9 C 1.37686 * 120.08940 * 359.45207 * 5 3 2 10 10 C 1.39753 * 119.91008 * 0.27564 * 9 5 3 11 11 C 1.47606 * 120.08704 * 179.97438 * 10 9 5 12 12 O 1.21582 * 119.99960 * 359.97438 * 11 10 9 13 13 N 1.34771 * 120.00066 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00165 * 180.02562 * 13 11 10 15 15 C 1.53003 * 109.47093 * 179.97438 * 14 13 11 16 16 F 1.39898 * 112.85182 * 48.80013 * 15 14 13 17 17 C 1.53784 * 113.61201 * 179.97438 * 15 14 13 18 18 C 1.53782 * 87.07755 * 139.97965 * 17 15 14 19 19 H 1.09000 * 113.61604 * 89.11886 * 18 17 15 20 20 C 1.53008 * 113.61141 * 219.93652 * 18 17 15 21 21 O 1.42902 * 109.46926 * 185.00388 * 20 18 17 22 22 C 1.53773 * 87.08264 * 334.56563 * 18 17 15 23 23 C 1.37728 * 119.95467 * 179.70832 * 2 1 3 24 24 H 1.09008 * 109.47068 * 270.29397 * 1 2 3 25 25 H 1.09004 * 109.47082 * 30.28808 * 1 2 3 26 26 H 1.08994 * 109.47458 * 150.29442 * 1 2 3 27 27 H 0.96703 * 113.99367 * 270.26825 * 4 3 2 28 28 H 1.09008 * 109.47144 * 314.73076 * 6 5 3 29 29 H 0.96700 * 114.00311 * 300.00591 * 7 6 5 30 30 H 1.48497 * 110.00081 * 298.68085 * 8 6 5 31 31 H 1.48500 * 110.00207 * 59.99993 * 8 6 5 32 32 H 1.07995 * 120.04284 * 180.24941 * 9 5 3 33 33 H 0.97002 * 120.00110 * 359.97438 * 13 11 10 34 34 H 1.09004 * 109.46487 * 299.99270 * 14 13 11 35 35 H 1.08997 * 109.47333 * 59.99079 * 14 13 11 36 36 H 1.08994 * 113.61326 * 254.52637 * 17 15 14 37 37 H 1.09002 * 113.61113 * 25.34991 * 17 15 14 38 38 H 1.09003 * 109.46981 * 304.99693 * 20 18 17 39 39 H 1.09000 * 109.47413 * 64.99758 * 20 18 17 40 40 H 0.96704 * 114.00014 * 180.02562 * 21 20 18 41 41 H 1.09004 * 113.62270 * 270.88434 * 22 18 17 42 42 H 1.09005 * 113.61474 * 139.98443 * 22 18 17 43 43 H 1.07999 * 120.04116 * 0.03931 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 -0.0054 6 6 4.3386 2.5178 -0.0116 7 8 4.2717 3.1109 1.2869 8 14 6.1199 2.2133 -0.4641 9 6 4.2859 0.0207 0.0007 10 6 3.5918 -1.1922 0.0064 11 6 4.3327 -2.4688 0.0124 12 8 5.5485 -2.4660 0.0118 13 7 3.6615 -3.6375 0.0174 14 6 4.3969 -4.9046 0.0238 15 6 3.4053 -6.0697 0.0292 16 9 2.4068 -5.9379 -0.9418 17 6 4.0791 -7.4521 0.0356 18 6 2.9876 -7.8924 1.0253 19 1 2.0942 -8.2883 0.5423 20 6 3.5055 -8.7943 2.1475 21 8 2.4067 -9.2434 2.9431 22 6 2.8661 -6.4133 1.4278 23 6 2.1947 -1.1933 0.0061 24 1 -0.3633 0.0053 1.0277 25 1 -0.3633 0.8874 -0.5183 26 1 -0.3634 -0.8925 -0.5092 27 1 1.3191 2.7157 -0.8841 28 1 3.8881 3.1903 -0.7417 29 1 3.3720 3.2976 1.5881 30 1 6.7544 1.3235 0.5412 31 1 6.2032 1.5968 -1.8125 32 1 5.3659 0.0257 0.0006 33 1 2.6915 -3.6397 0.0174 34 1 5.0242 -4.9650 -0.8656 35 1 5.0232 -4.9567 0.9144 36 1 4.0309 -7.9657 -0.9245 37 1 5.0818 -7.4470 0.4632 38 1 4.0167 -9.6547 1.7155 39 1 4.2014 -8.2341 2.7720 40 1 2.6616 -9.8209 3.6757 41 1 3.5366 -6.1244 2.2373 42 1 1.8386 -6.0883 1.5917 43 1 1.6546 -2.1285 0.0102 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:14 Heat of formation + Delta-G solvation = -159.171530 kcal Electronic energy + Delta-G solvation = -27858.218155 eV Core-core repulsion = 23592.305169 eV Total energy + Delta-G solvation = -4265.912986 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.93664 -41.80114 -40.57547 -39.88409 -37.79802 -37.60017 -37.30190 -35.75610 -34.09769 -32.24033 -30.18923 -28.21041 -27.52019 -27.18819 -26.76093 -24.53712 -22.47797 -22.15472 -21.55243 -20.80635 -19.70796 -18.99472 -18.42694 -18.21283 -17.82819 -17.25497 -16.96206 -16.93726 -16.57842 -16.42762 -16.09774 -15.90023 -15.56960 -15.33263 -15.17728 -15.06752 -14.72433 -14.52685 -14.28081 -13.94032 -13.87488 -13.70124 -13.64004 -13.47642 -13.35274 -13.06598 -12.86210 -12.52398 -12.30983 -12.07656 -12.04332 -11.66536 -11.48421 -11.24375 -11.11504 -11.01820 -10.94698 -10.33465 -10.05560 -9.78683 -4.80120 -0.49772 -0.01773 1.37132 1.56268 1.71061 1.84694 2.05036 2.50122 2.84288 2.87439 2.94534 2.99948 3.17348 3.32520 3.34137 3.45789 3.54384 3.62324 3.82927 3.91673 4.03032 4.07971 4.16668 4.19296 4.28628 4.29900 4.37029 4.38063 4.43545 4.46427 4.49726 4.53565 4.56633 4.66596 4.74682 4.80031 4.89581 4.97574 5.00754 5.12124 5.14544 5.22886 5.41452 6.25850 6.35566 6.55854 6.57982 7.02406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.111 4.111 3 C 0.145 3.855 4 O -0.489 6.489 5 C -0.142 4.142 6 C -0.073 4.073 7 O -0.532 6.532 8 Si 0.741 3.259 9 C -0.052 4.052 10 C -0.134 4.134 11 C 0.562 3.438 12 O -0.531 6.531 13 N -0.723 5.723 14 C 0.113 3.887 15 C 0.079 3.921 16 F -0.184 7.184 17 C -0.141 4.141 18 C -0.108 4.108 19 H 0.105 0.895 20 C 0.085 3.915 21 O -0.573 6.573 22 C -0.146 4.146 23 C -0.068 4.068 24 H 0.077 0.923 25 H 0.072 0.928 26 H 0.071 0.929 27 H 0.396 0.604 28 H 0.074 0.926 29 H 0.369 0.631 30 H -0.248 1.248 31 H -0.247 1.247 32 H 0.141 0.859 33 H 0.404 0.596 34 H 0.084 0.916 35 H 0.092 0.908 36 H 0.090 0.910 37 H 0.106 0.894 38 H 0.051 0.949 39 H 0.050 0.950 40 H 0.382 0.618 41 H 0.103 0.897 42 H 0.085 0.915 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.152 -0.587 -0.719 2.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.112 4.112 3 C 0.100 3.900 4 O -0.301 6.301 5 C -0.143 4.143 6 C -0.182 4.182 7 O -0.338 6.338 8 Si 0.639 3.361 9 C -0.070 4.070 10 C -0.138 4.138 11 C 0.350 3.650 12 O -0.408 6.408 13 N -0.376 5.376 14 C -0.011 4.011 15 C 0.060 3.940 16 F -0.164 7.164 17 C -0.180 4.180 18 C -0.126 4.126 19 H 0.124 0.876 20 C 0.008 3.992 21 O -0.379 6.379 22 C -0.184 4.184 23 C -0.086 4.086 24 H 0.096 0.904 25 H 0.091 0.909 26 H 0.090 0.910 27 H 0.254 0.746 28 H 0.092 0.908 29 H 0.218 0.782 30 H -0.172 1.172 31 H -0.172 1.172 32 H 0.158 0.842 33 H 0.240 0.760 34 H 0.102 0.898 35 H 0.110 0.890 36 H 0.109 0.891 37 H 0.125 0.875 38 H 0.069 0.931 39 H 0.068 0.932 40 H 0.230 0.770 41 H 0.121 0.879 42 H 0.104 0.896 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.367 -0.939 -0.827 1.304 hybrid contribution -2.011 -0.917 -0.022 2.211 sum -2.378 -1.856 -0.850 3.134 Atomic orbital electron populations 1.20710 0.89436 1.03292 1.03251 1.20203 0.97393 0.91966 1.01601 1.18306 0.88623 0.85354 0.97735 1.84744 1.75752 1.35714 1.33871 1.20679 0.93542 0.96408 1.03626 1.25171 1.13222 0.90860 0.88921 1.86734 1.32997 1.82222 1.31848 0.93243 0.76574 0.86763 0.79535 1.21003 1.00358 0.90437 0.95203 1.19801 0.93570 0.93259 1.07128 1.18114 0.87183 0.83490 0.76219 1.90821 1.13264 1.87493 1.49252 1.45710 1.10731 1.05210 1.75959 1.21846 0.93875 0.80866 1.04507 1.22084 0.87447 0.95938 0.88513 1.92880 1.62377 1.96773 1.64383 1.23551 0.99522 0.93510 1.01375 1.22506 0.99731 0.94529 0.95849 0.87648 1.22140 0.88440 0.96828 0.91840 1.86486 1.34576 1.70397 1.46440 1.23720 1.03550 0.96028 0.95090 1.21117 0.92463 0.98007 0.97046 0.90388 0.90899 0.91045 0.74593 0.90792 0.78247 1.17221 1.17178 0.84198 0.75974 0.89788 0.88975 0.89091 0.87543 0.93095 0.93200 0.77022 0.87893 0.89638 0.84839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.22 9.78 36.00 0.35 0.57 16 2 C -0.11 -0.01 5.89 -104.54 -0.62 -0.62 16 3 C 0.15 0.09 6.61 -39.02 -0.26 -0.17 16 4 O -0.49 0.69 11.39 -18.83 -0.21 0.48 16 5 C -0.14 -0.29 5.27 -104.54 -0.55 -0.84 16 6 C -0.07 -0.07 2.33 36.00 0.08 0.01 16 7 O -0.53 -1.11 12.65 -35.23 -0.45 -1.55 16 8 Si 0.74 0.79 30.40 -169.99 -5.17 -4.37 16 9 C -0.05 -0.19 8.20 -39.22 -0.32 -0.51 16 10 C -0.13 -0.37 5.87 -104.96 -0.62 -0.98 16 11 C 0.56 2.06 7.76 -12.44 -0.10 1.96 16 12 O -0.53 -3.83 16.34 5.29 0.09 -3.74 16 13 N -0.72 -0.47 5.42 -61.32 -0.33 -0.80 16 14 C 0.11 -0.03 5.37 -4.04 -0.02 -0.05 16 15 C 0.08 -0.09 1.67 -89.81 -0.15 -0.24 16 16 F -0.18 -0.19 16.80 2.25 0.04 -0.16 16 17 C -0.14 0.32 7.09 -25.92 -0.18 0.14 16 18 C -0.11 0.13 3.99 -89.81 -0.36 -0.22 16 19 H 0.11 0.01 8.14 -51.93 -0.42 -0.41 16 20 C 0.09 -0.14 6.89 37.16 0.26 0.11 16 21 O -0.57 0.00 13.66 -35.23 -0.48 -0.48 16 22 C -0.15 0.22 7.08 -25.92 -0.18 0.04 16 23 C -0.07 -0.02 9.18 -39.22 -0.36 -0.38 16 24 H 0.08 -0.14 8.14 -51.92 -0.42 -0.57 16 25 H 0.07 -0.19 7.53 -51.93 -0.39 -0.58 16 26 H 0.07 -0.21 8.08 -51.93 -0.42 -0.63 16 27 H 0.40 -2.18 9.06 45.56 0.41 -1.77 16 28 H 0.07 -0.09 7.83 -51.92 -0.41 -0.50 16 29 H 0.37 0.04 8.56 45.56 0.39 0.43 16 30 H -0.25 -1.09 6.81 56.52 0.38 -0.71 16 31 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 32 H 0.14 0.70 4.51 -52.49 -0.24 0.46 16 33 H 0.40 -0.50 6.21 -40.82 -0.25 -0.75 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 35 H 0.09 -0.06 7.94 -51.93 -0.41 -0.48 16 36 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.11 -0.40 8.06 -51.93 -0.42 -0.82 16 38 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.05 -0.14 7.85 -51.93 -0.41 -0.55 16 40 H 0.38 -1.57 9.12 45.56 0.42 -1.15 16 41 H 0.10 -0.24 7.72 -51.93 -0.40 -0.64 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.13 -0.31 6.39 -52.49 -0.34 -0.65 16 LS Contribution 361.26 15.07 5.44 5.44 Total: 0.00 -9.68 361.26 -8.31 -18.00 By element: Atomic # 1 Polarization: -7.41 SS G_CDS: -4.21 Total: -11.62 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -3.02 Total: -1.18 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -0.33 Total: -0.80 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -1.06 Total: -5.30 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.04 Total: -0.16 kcal Atomic # 14 Polarization: 0.79 SS G_CDS: -5.17 Total: -4.37 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.68 -8.31 -18.00 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.176 kcal (2) G-P(sol) polarization free energy of solvation -9.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -159.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds