Wall clock time and date at job start Sun Mar 7 2021 08:58:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38980 * 119.95774 * 2 1 4 4 O 1.35708 * 119.91146 * 359.97438 * 3 2 1 5 5 C 1.39016 * 120.17425 * 180.25535 * 3 2 1 6 6 C 1.50696 * 119.95690 * 179.72573 * 5 3 2 7 7 O 1.42903 * 109.47131 * 74.72305 * 6 5 3 8 8 Si 1.86292 * 109.47450 * 194.72641 * 6 5 3 9 9 C 1.37686 * 120.08940 * 359.45207 * 5 3 2 10 10 C 1.39753 * 119.91008 * 0.27564 * 9 5 3 11 11 C 1.47606 * 120.08704 * 179.97438 * 10 9 5 12 12 O 1.21582 * 119.99960 * 359.97438 * 11 10 9 13 13 N 1.34771 * 120.00066 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00165 * 180.02562 * 13 11 10 15 15 C 1.53003 * 109.47093 * 179.97438 * 14 13 11 16 16 F 1.39898 * 112.85182 * 48.80013 * 15 14 13 17 17 C 1.53784 * 113.61201 * 179.97438 * 15 14 13 18 18 C 1.53782 * 87.07755 * 139.97965 * 17 15 14 19 19 H 1.09000 * 113.61604 * 89.11886 * 18 17 15 20 20 C 1.53008 * 113.61141 * 219.93652 * 18 17 15 21 21 O 1.42902 * 109.46926 * 185.00388 * 20 18 17 22 22 C 1.53773 * 87.08264 * 334.56563 * 18 17 15 23 23 C 1.37728 * 119.95467 * 179.70832 * 2 1 3 24 24 H 1.09008 * 109.47068 * 270.29397 * 1 2 3 25 25 H 1.09004 * 109.47082 * 30.28808 * 1 2 3 26 26 H 1.08994 * 109.47458 * 150.29442 * 1 2 3 27 27 H 0.96703 * 113.99367 * 270.26825 * 4 3 2 28 28 H 1.09008 * 109.47144 * 314.73076 * 6 5 3 29 29 H 0.96700 * 114.00311 * 300.00591 * 7 6 5 30 30 H 1.48497 * 110.00081 * 298.68085 * 8 6 5 31 31 H 1.48500 * 110.00207 * 59.99993 * 8 6 5 32 32 H 1.07995 * 120.04284 * 180.24941 * 9 5 3 33 33 H 0.97002 * 120.00110 * 359.97438 * 13 11 10 34 34 H 1.09004 * 109.46487 * 299.99270 * 14 13 11 35 35 H 1.08997 * 109.47333 * 59.99079 * 14 13 11 36 36 H 1.08994 * 113.61326 * 254.52637 * 17 15 14 37 37 H 1.09002 * 113.61113 * 25.34991 * 17 15 14 38 38 H 1.09003 * 109.46981 * 304.99693 * 20 18 17 39 39 H 1.09000 * 109.47413 * 64.99758 * 20 18 17 40 40 H 0.96704 * 114.00014 * 180.02562 * 21 20 18 41 41 H 1.09004 * 113.62270 * 270.88434 * 22 18 17 42 42 H 1.09005 * 113.61474 * 139.98443 * 22 18 17 43 43 H 1.07999 * 120.04116 * 0.03931 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 -0.0054 6 6 4.3386 2.5178 -0.0116 7 8 4.2717 3.1109 1.2869 8 14 6.1199 2.2133 -0.4641 9 6 4.2859 0.0207 0.0007 10 6 3.5918 -1.1922 0.0064 11 6 4.3327 -2.4688 0.0124 12 8 5.5485 -2.4660 0.0118 13 7 3.6615 -3.6375 0.0174 14 6 4.3969 -4.9046 0.0238 15 6 3.4053 -6.0697 0.0292 16 9 2.4068 -5.9379 -0.9418 17 6 4.0791 -7.4521 0.0356 18 6 2.9876 -7.8924 1.0253 19 1 2.0942 -8.2883 0.5423 20 6 3.5055 -8.7943 2.1475 21 8 2.4067 -9.2434 2.9431 22 6 2.8661 -6.4133 1.4278 23 6 2.1947 -1.1933 0.0061 24 1 -0.3633 0.0053 1.0277 25 1 -0.3633 0.8874 -0.5183 26 1 -0.3634 -0.8925 -0.5092 27 1 1.3191 2.7157 -0.8841 28 1 3.8881 3.1903 -0.7417 29 1 3.3720 3.2976 1.5881 30 1 6.7544 1.3235 0.5412 31 1 6.2032 1.5968 -1.8125 32 1 5.3659 0.0257 0.0006 33 1 2.6915 -3.6397 0.0174 34 1 5.0242 -4.9650 -0.8656 35 1 5.0232 -4.9567 0.9144 36 1 4.0309 -7.9657 -0.9245 37 1 5.0818 -7.4470 0.4632 38 1 4.0167 -9.6547 1.7155 39 1 4.2014 -8.2341 2.7720 40 1 2.6616 -9.8209 3.6757 41 1 3.5366 -6.1244 2.2373 42 1 1.8386 -6.0883 1.5917 43 1 1.6546 -2.1285 0.0102 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:12 Heat of formation + Delta-G solvation = -164.396546 kcal Electronic energy + Delta-G solvation = -27858.444729 eV Core-core repulsion = 23592.305169 eV Total energy + Delta-G solvation = -4266.139560 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -48.95390 -41.89935 -40.68487 -39.83446 -37.79347 -37.68020 -37.24513 -35.91160 -34.12197 -32.30539 -30.17312 -28.14475 -27.48724 -27.06740 -26.79951 -24.62456 -22.47675 -22.16137 -21.67273 -20.72491 -19.68375 -19.09653 -18.36235 -18.24538 -17.93879 -17.22604 -16.99655 -16.91095 -16.61061 -16.44825 -16.20471 -15.97966 -15.57700 -15.44334 -15.24725 -15.01486 -14.80441 -14.48549 -14.24393 -13.99174 -13.87362 -13.77835 -13.48882 -13.44929 -13.26352 -12.98087 -12.92162 -12.44334 -12.40318 -12.30627 -11.95085 -11.65844 -11.40823 -11.36404 -11.19847 -11.09989 -10.85248 -10.50642 -10.11846 -9.83175 -4.95214 -0.59225 -0.10368 1.24362 1.40460 1.54432 1.74275 1.90418 2.37833 2.92078 2.96891 3.04035 3.06299 3.27296 3.29063 3.38962 3.45057 3.49272 3.75429 3.77779 3.89705 3.96937 4.15860 4.25957 4.28976 4.30805 4.38959 4.45036 4.49115 4.54833 4.57631 4.58448 4.66358 4.74461 4.78613 4.83449 4.85652 4.92393 4.92972 5.04487 5.09485 5.17046 5.32049 5.45962 6.14322 6.58022 6.61124 6.83285 6.85671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.112 4.112 3 C 0.157 3.843 4 O -0.488 6.488 5 C -0.154 4.154 6 C -0.072 4.072 7 O -0.546 6.546 8 Si 0.801 3.199 9 C -0.078 4.078 10 C -0.152 4.152 11 C 0.559 3.441 12 O -0.578 6.578 13 N -0.709 5.709 14 C 0.111 3.889 15 C 0.080 3.920 16 F -0.197 7.197 17 C -0.134 4.134 18 C -0.111 4.111 19 H 0.088 0.912 20 C 0.083 3.917 21 O -0.598 6.598 22 C -0.142 4.142 23 C -0.059 4.059 24 H 0.079 0.921 25 H 0.083 0.917 26 H 0.084 0.916 27 H 0.417 0.583 28 H 0.105 0.895 29 H 0.379 0.621 30 H -0.305 1.305 31 H -0.271 1.271 32 H 0.115 0.885 33 H 0.414 0.586 34 H 0.076 0.924 35 H 0.099 0.901 36 H 0.090 0.910 37 H 0.125 0.875 38 H 0.059 0.941 39 H 0.063 0.937 40 H 0.397 0.603 41 H 0.114 0.886 42 H 0.080 0.920 43 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.018 -0.272 -0.713 4.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.113 4.113 3 C 0.111 3.889 4 O -0.303 6.303 5 C -0.155 4.155 6 C -0.182 4.182 7 O -0.353 6.353 8 Si 0.706 3.294 9 C -0.097 4.097 10 C -0.156 4.156 11 C 0.348 3.652 12 O -0.459 6.459 13 N -0.362 5.362 14 C -0.012 4.012 15 C 0.061 3.939 16 F -0.177 7.177 17 C -0.171 4.171 18 C -0.130 4.130 19 H 0.106 0.894 20 C 0.006 3.994 21 O -0.407 6.407 22 C -0.180 4.180 23 C -0.078 4.078 24 H 0.098 0.902 25 H 0.102 0.898 26 H 0.103 0.897 27 H 0.279 0.721 28 H 0.123 0.877 29 H 0.228 0.772 30 H -0.233 1.233 31 H -0.197 1.197 32 H 0.132 0.868 33 H 0.252 0.748 34 H 0.094 0.906 35 H 0.117 0.883 36 H 0.109 0.891 37 H 0.143 0.857 38 H 0.078 0.922 39 H 0.081 0.919 40 H 0.247 0.753 41 H 0.132 0.868 42 H 0.099 0.901 43 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -2.279 -0.618 -0.837 2.505 hybrid contribution -1.466 -1.063 -0.004 1.811 sum -3.745 -1.681 -0.841 4.190 Atomic orbital electron populations 1.20777 0.87534 1.04549 1.03668 1.20511 0.98665 0.91522 1.00597 1.18300 0.88000 0.86327 0.96306 1.84700 1.75147 1.34793 1.35665 1.20781 0.94504 0.95994 1.04218 1.25129 1.12518 0.91168 0.89372 1.86700 1.33986 1.82259 1.32378 0.92770 0.75740 0.84924 0.76014 1.20985 0.99458 0.91982 0.97297 1.19810 0.94696 0.92377 1.08668 1.18366 0.86731 0.84519 0.75619 1.90789 1.15200 1.88146 1.51801 1.45647 1.11247 1.04808 1.74454 1.21936 0.94153 0.80672 1.04481 1.22144 0.87117 0.96096 0.88549 1.92852 1.62972 1.96859 1.65014 1.23571 1.00100 0.92188 1.01285 1.22472 0.99473 0.94732 0.96312 0.89357 1.22225 0.88219 0.97233 0.91759 1.86439 1.35829 1.71027 1.47385 1.23732 1.03487 0.95826 0.94938 1.21367 0.91286 0.99469 0.95641 0.90226 0.89843 0.89709 0.72133 0.87673 0.77158 1.23322 1.19748 0.86794 0.74772 0.90566 0.88333 0.89098 0.85693 0.92237 0.91864 0.75259 0.86819 0.90139 0.82302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.69 9.78 71.23 0.70 1.39 16 2 C -0.11 0.14 5.89 -19.81 -0.12 0.02 16 3 C 0.16 0.02 6.61 22.63 0.15 0.17 16 4 O -0.49 2.46 11.39 -90.29 -1.03 1.44 16 5 C -0.15 -0.71 5.27 -19.81 -0.10 -0.82 16 6 C -0.07 -0.15 2.33 71.23 0.17 0.02 16 7 O -0.55 -2.23 12.65 -148.98 -1.89 -4.12 16 8 Si 0.80 3.46 30.40 68.60 2.09 5.55 16 9 C -0.08 -0.76 8.20 22.51 0.18 -0.58 16 10 C -0.15 -1.05 5.87 -20.08 -0.12 -1.17 16 11 C 0.56 5.19 7.76 86.72 0.67 5.86 16 12 O -0.58 -10.21 16.34 -3.98 -0.06 -10.27 16 13 N -0.71 -1.48 5.42 -466.20 -2.53 -4.01 16 14 C 0.11 0.02 5.37 86.38 0.46 0.49 16 15 C 0.08 -0.17 1.67 -10.27 -0.02 -0.18 16 16 F -0.20 -0.46 16.80 44.97 0.76 0.30 16 17 C -0.13 0.65 7.09 31.12 0.22 0.87 16 18 C -0.11 0.28 3.99 -10.27 -0.04 0.24 16 19 H 0.09 0.08 8.14 -2.39 -0.02 0.06 16 20 C 0.08 -0.33 6.89 71.98 0.50 0.17 16 21 O -0.60 0.11 13.66 -148.98 -2.04 -1.92 16 22 C -0.14 0.46 7.08 31.12 0.22 0.68 16 23 C -0.06 0.00 9.18 22.51 0.21 0.20 16 24 H 0.08 -0.47 8.14 -2.38 -0.02 -0.49 16 25 H 0.08 -0.67 7.53 -2.38 -0.02 -0.69 16 26 H 0.08 -0.73 8.08 -2.39 -0.02 -0.75 16 27 H 0.42 -5.76 9.06 -74.06 -0.67 -6.43 16 28 H 0.11 -0.44 7.83 -2.38 -0.02 -0.45 16 29 H 0.38 -0.22 8.56 -74.06 -0.63 -0.85 16 30 H -0.30 -4.15 6.81 99.48 0.68 -3.48 16 31 H -0.27 -2.11 7.11 99.48 0.71 -1.41 16 32 H 0.11 1.63 4.51 -2.91 -0.01 1.62 16 33 H 0.41 -1.04 6.21 -92.71 -0.58 -1.62 16 34 H 0.08 0.16 8.14 -2.38 -0.02 0.14 16 35 H 0.10 -0.08 7.94 -2.39 -0.02 -0.10 16 36 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 37 H 0.12 -1.07 8.06 -2.39 -0.02 -1.09 16 38 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 39 H 0.06 -0.42 7.85 -2.39 -0.02 -0.44 16 40 H 0.40 -3.36 9.12 -74.05 -0.68 -4.04 16 41 H 0.11 -0.61 7.72 -2.38 -0.02 -0.63 16 42 H 0.08 -0.16 8.14 -2.38 -0.02 -0.18 16 43 H 0.16 -0.96 6.39 -2.91 -0.02 -0.98 16 Total: 0.00 -25.21 361.26 -3.07 -28.28 By element: Atomic # 1 Polarization: -21.16 SS G_CDS: -1.45 Total: -22.61 kcal Atomic # 6 Polarization: 4.29 SS G_CDS: 3.08 Total: 7.37 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -2.53 Total: -4.01 kcal Atomic # 8 Polarization: -9.87 SS G_CDS: -5.01 Total: -14.88 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.76 Total: 0.30 kcal Atomic # 14 Polarization: 3.46 SS G_CDS: 2.09 Total: 5.55 kcal Total: -25.21 -3.07 -28.28 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.115 kcal (2) G-P(sol) polarization free energy of solvation -25.212 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.282 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds