Wall clock time and date at job start Sun Mar 7 2021 08:58:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86293 * 109.47000 * 2 1 4 4 C 1.50699 * 109.46732 * 119.99873 * 2 1 3 5 5 C 1.34856 * 125.89827 * 218.37466 * 4 2 1 6 6 C 1.40942 * 107.46740 * 180.24060 * 5 4 2 7 7 C 1.34849 * 107.46416 * 359.75405 * 6 5 4 8 8 N 1.36566 * 125.90106 * 38.19671 * 4 2 1 9 9 C 1.40197 * 125.67069 * 0.02562 * 8 4 2 10 10 C 1.38826 * 120.06650 * 235.78707 * 9 8 4 11 11 C 1.38114 * 119.93611 * 179.97438 * 10 9 8 12 12 C 1.38272 * 120.06650 * 0.02562 * 11 10 9 13 13 C 1.50698 * 119.93821 * 179.97438 * 12 11 10 14 14 C 1.50697 * 109.47296 * 89.99967 * 13 12 11 15 15 O 1.21279 * 119.99948 * 0.02562 * 14 13 12 16 16 N 1.34777 * 120.00178 * 180.02562 * 14 13 12 17 17 C 1.46503 * 119.99881 * 179.97438 * 16 14 13 18 18 C 1.53000 * 109.47083 * 179.97438 * 17 16 14 19 19 F 1.39902 * 112.85109 * 48.80438 * 18 17 16 20 20 C 1.53774 * 113.61500 * 180.02562 * 18 17 16 21 21 C 1.53779 * 87.08379 * 140.06599 * 20 18 17 22 22 H 1.09004 * 113.61346 * 89.19587 * 21 20 18 23 23 C 1.52995 * 113.61832 * 220.01882 * 21 20 18 24 24 O 1.42901 * 109.47524 * 183.47161 * 23 21 20 25 25 C 1.53784 * 87.17323 * 334.61012 * 21 20 18 26 26 C 1.38283 * 120.13191 * 0.27573 * 12 11 10 27 27 C 1.38124 * 120.06199 * 359.44901 * 26 12 11 28 28 H 0.96700 * 114.00312 * 305.21794 * 1 2 3 29 29 H 1.09000 * 109.47059 * 240.00084 * 2 1 3 30 30 H 1.48506 * 110.00097 * 299.99480 * 3 2 1 31 31 H 1.48504 * 110.00253 * 61.31759 * 3 2 1 32 32 H 1.08000 * 126.26528 * 359.97438 * 5 4 2 33 33 H 1.07997 * 126.26229 * 179.75229 * 6 5 4 34 34 H 1.08003 * 125.89516 * 180.02562 * 7 6 5 35 35 H 1.08003 * 120.02789 * 359.97438 * 10 9 8 36 36 H 1.08002 * 119.97286 * 180.02562 * 11 10 9 37 37 H 1.09001 * 109.47416 * 330.00016 * 13 12 11 38 38 H 1.09003 * 109.47801 * 209.99954 * 13 12 11 39 39 H 0.97001 * 120.00218 * 359.97438 * 16 14 13 40 40 H 1.09006 * 109.47047 * 60.00206 * 17 16 14 41 41 H 1.08991 * 109.47279 * 300.00080 * 17 16 14 42 42 H 1.09000 * 113.61781 * 25.51475 * 20 18 17 43 43 H 1.09005 * 113.69332 * 254.62495 * 20 18 17 44 44 H 1.09001 * 109.47319 * 63.47089 * 23 21 20 45 45 H 1.09003 * 109.47222 * 303.47239 * 23 21 20 46 46 H 0.96696 * 114.00300 * 180.02562 * 24 23 21 47 47 H 1.09001 * 113.61565 * 139.93752 * 25 21 20 48 48 H 1.08997 * 113.61112 * 270.84053 * 25 21 20 49 49 H 1.08000 * 119.96912 * 179.70848 * 26 12 11 50 50 H 1.07998 * 120.03271 * 180.28025 * 27 26 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 3.0022 -0.3531 1.9680 6 6 3.1217 -1.2845 3.0191 7 6 2.1162 -2.1734 2.8884 8 7 1.3784 -1.8252 1.7933 9 6 0.2455 -2.5030 1.3216 10 6 -0.8409 -2.7098 2.1608 11 6 -1.9559 -3.3774 1.6932 12 6 -1.9906 -3.8402 0.3907 13 6 -3.2083 -4.5688 -0.1164 14 6 -4.1764 -3.5775 -0.7090 15 8 -3.9041 -2.3957 -0.7190 16 7 -5.3448 -4.0042 -1.2278 17 6 -6.2862 -3.0403 -1.8033 18 6 -7.5225 -3.7801 -2.3182 19 9 -8.0487 -4.6763 -1.3817 20 6 -8.5777 -2.8540 -2.9456 21 6 -8.7790 -3.9388 -4.0167 22 1 -9.5337 -4.6793 -3.7518 23 6 -8.9656 -3.3792 -5.4284 24 8 -9.2247 -4.4522 -6.3359 25 6 -7.3400 -4.3922 -3.7191 26 6 -0.9075 -3.6412 -0.4458 27 6 0.2080 -2.9693 0.0145 28 1 -0.3934 0.5094 0.7217 29 1 1.7923 -0.5138 -0.8900 30 1 1.5615 2.4678 -1.2086 31 1 1.5878 2.4586 1.2242 32 1 3.6521 0.4896 1.7842 33 1 3.8799 -1.2858 3.7883 34 1 1.9269 -3.0153 3.5380 35 1 -0.8142 -2.3489 3.1784 36 1 -2.8015 -3.5383 2.3454 37 1 -3.6871 -5.0950 0.7095 38 1 -2.9104 -5.2868 -0.8805 39 1 -5.5626 -4.9494 -1.2201 40 1 -5.8078 -2.5142 -2.6294 41 1 -6.5839 -2.3225 -1.0391 42 1 -8.1651 -1.9244 -3.3376 43 1 -9.4523 -2.6958 -2.3146 44 1 -8.0599 -2.8554 -5.7343 45 1 -9.8065 -2.6857 -5.4361 46 1 -9.3533 -4.1703 -7.2519 47 1 -7.2163 -5.4752 -3.7107 48 1 -6.5883 -3.8840 -4.3231 49 1 -0.9356 -4.0079 -1.4612 50 1 1.0517 -2.8102 -0.6406 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:16 Heat of formation + Delta-G solvation = -54.413918 kcal Electronic energy + Delta-G solvation = -33550.853625 eV Core-core repulsion = 28846.985892 eV Total energy + Delta-G solvation = -4703.867733 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.168 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -48.90047 -42.68169 -41.09175 -39.98004 -39.52602 -37.87445 -37.21590 -35.62036 -34.87662 -32.18943 -32.05372 -31.07097 -30.28154 -28.12076 -27.10203 -26.58805 -26.06254 -23.99463 -23.40789 -22.23277 -21.60156 -21.40875 -20.69630 -20.62144 -19.32036 -18.40423 -18.30697 -17.72115 -17.50533 -17.19086 -16.94031 -16.72417 -16.41020 -16.30044 -16.16197 -15.90237 -15.82114 -15.52607 -15.29382 -14.99622 -14.81870 -14.63537 -14.55272 -14.41670 -14.27799 -14.16041 -13.90771 -13.80271 -13.47518 -13.37627 -13.24291 -13.20865 -12.94730 -12.66179 -12.40033 -12.35385 -12.13737 -11.91722 -11.89312 -11.54397 -11.35774 -11.07624 -10.94032 -10.84169 -10.25155 -10.23810 -10.03138 -9.24446 -9.08118 -4.93701 -0.02031 0.31161 1.05120 1.35699 1.56623 1.63571 1.81470 1.99684 2.01541 2.10362 2.65895 3.01383 3.09784 3.13982 3.24224 3.32044 3.50492 3.57708 3.67180 3.72727 3.80369 3.85226 3.96851 4.13829 4.18609 4.22869 4.28753 4.31867 4.42287 4.44979 4.50783 4.51182 4.54056 4.57362 4.60018 4.60146 4.63096 4.67997 4.81278 4.82442 4.89343 4.92997 4.95513 5.17123 5.19300 5.25338 5.26676 5.35372 5.36033 5.46336 5.76021 5.93586 6.18593 6.34781 6.40889 6.49677 6.85855 7.15400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.806 3.194 4 C -0.027 4.027 5 C -0.193 4.193 6 C -0.200 4.200 7 C -0.019 4.019 8 N -0.399 5.399 9 C 0.117 3.883 10 C -0.126 4.126 11 C -0.098 4.098 12 C -0.067 4.067 13 C -0.098 4.098 14 C 0.515 3.485 15 O -0.574 6.574 16 N -0.721 5.721 17 C 0.115 3.885 18 C 0.081 3.919 19 F -0.198 7.198 20 C -0.136 4.136 21 C -0.114 4.114 22 H 0.086 0.914 23 C 0.083 3.917 24 O -0.598 6.598 25 C -0.139 4.139 26 C -0.097 4.097 27 C -0.107 4.107 28 H 0.377 0.623 29 H 0.119 0.881 30 H -0.295 1.295 31 H -0.290 1.290 32 H 0.169 0.831 33 H 0.158 0.842 34 H 0.176 0.824 35 H 0.130 0.870 36 H 0.143 0.857 37 H 0.132 0.868 38 H 0.134 0.866 39 H 0.415 0.585 40 H 0.092 0.908 41 H 0.068 0.932 42 H 0.123 0.877 43 H 0.088 0.912 44 H 0.064 0.936 45 H 0.058 0.942 46 H 0.397 0.603 47 H 0.080 0.920 48 H 0.113 0.887 49 H 0.141 0.859 50 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.102 -2.163 -2.339 3.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.173 4.173 3 Si 0.708 3.292 4 C -0.136 4.136 5 C -0.217 4.217 6 C -0.224 4.224 7 C -0.147 4.147 8 N -0.072 5.072 9 C 0.028 3.972 10 C -0.145 4.145 11 C -0.116 4.116 12 C -0.068 4.068 13 C -0.137 4.137 14 C 0.302 3.698 15 O -0.453 6.453 16 N -0.374 5.374 17 C -0.009 4.009 18 C 0.062 3.938 19 F -0.178 7.178 20 C -0.174 4.174 21 C -0.132 4.132 22 H 0.105 0.895 23 C 0.006 3.994 24 O -0.407 6.407 25 C -0.177 4.177 26 C -0.115 4.115 27 C -0.126 4.126 28 H 0.224 0.776 29 H 0.137 0.863 30 H -0.223 1.223 31 H -0.217 1.217 32 H 0.186 0.814 33 H 0.175 0.825 34 H 0.193 0.807 35 H 0.148 0.852 36 H 0.161 0.839 37 H 0.150 0.850 38 H 0.152 0.848 39 H 0.252 0.748 40 H 0.110 0.890 41 H 0.087 0.913 42 H 0.141 0.859 43 H 0.107 0.893 44 H 0.082 0.918 45 H 0.076 0.924 46 H 0.247 0.753 47 H 0.098 0.902 48 H 0.131 0.869 49 H 0.159 0.841 50 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.268 -1.399 -2.412 2.801 hybrid contribution -1.452 -0.297 0.264 1.506 sum -1.720 -1.697 -2.148 3.233 Atomic orbital electron populations 1.86643 1.18393 1.74982 1.54614 1.25078 0.83481 1.12371 0.96387 0.93535 0.89827 0.69565 0.76234 1.21255 0.99416 0.92245 1.00708 1.21046 0.99535 1.03546 0.97581 1.21230 1.01468 0.97434 1.02243 1.22365 0.95671 1.03727 0.92934 1.41572 1.21265 1.21461 1.22944 1.17757 0.86989 0.98063 0.94409 1.21128 0.92393 1.00738 1.00213 1.21079 0.97614 0.97061 0.95862 1.19549 0.94900 0.98599 0.93746 1.20756 0.91904 0.96927 1.04132 1.20989 0.82079 0.89501 0.77206 1.90770 1.76810 1.19637 1.58066 1.45812 1.18372 1.11905 1.61346 1.21747 0.87835 0.91827 0.99499 1.22165 0.93848 0.90404 0.87353 1.92851 1.87851 1.69684 1.67444 1.23566 0.98733 0.98323 0.96798 1.22490 0.97741 0.98681 0.94336 0.89521 1.22220 1.00404 0.88620 0.88172 1.86437 1.94791 1.36249 1.23188 1.23721 0.97846 1.02681 0.93434 1.21071 0.92338 0.98047 1.00069 1.21000 0.99417 0.97828 0.94361 0.77561 0.86309 1.22306 1.21652 0.81387 0.82459 0.80652 0.85177 0.83932 0.85028 0.84843 0.74782 0.88996 0.91340 0.85895 0.89345 0.91828 0.92405 0.75275 0.90171 0.86853 0.84087 0.86058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -4.51 10.98 -148.98 -1.64 -6.15 16 2 C -0.07 -0.26 2.48 71.24 0.18 -0.09 16 3 Si 0.81 0.66 30.79 68.60 2.11 2.77 16 4 C -0.03 -0.15 6.12 41.04 0.25 0.10 16 5 C -0.19 -0.69 9.39 22.15 0.21 -0.48 16 6 C -0.20 -0.77 10.86 22.15 0.24 -0.53 16 7 C -0.02 -0.10 11.21 83.18 0.93 0.84 16 8 N -0.40 -2.76 2.84 -333.41 -0.95 -3.70 16 9 C 0.12 0.82 4.69 38.08 0.18 0.99 16 10 C -0.13 -0.64 9.77 22.38 0.22 -0.43 16 11 C -0.10 -0.29 9.69 22.25 0.22 -0.07 16 12 C -0.07 -0.14 4.37 -19.85 -0.09 -0.23 16 13 C -0.10 0.40 5.83 29.10 0.17 0.57 16 14 C 0.51 1.08 7.82 87.66 0.69 1.76 16 15 O -0.57 -6.92 16.03 -3.03 -0.05 -6.97 16 16 N -0.72 1.57 5.47 -463.06 -2.53 -0.97 16 17 C 0.12 -0.17 5.37 86.38 0.46 0.29 16 18 C 0.08 -0.22 1.67 -10.21 -0.02 -0.24 16 19 F -0.20 -0.39 16.79 44.97 0.76 0.37 16 20 C -0.14 0.65 7.10 31.12 0.22 0.87 16 21 C -0.11 0.29 3.98 -10.27 -0.04 0.25 16 22 H 0.09 0.10 8.14 -2.38 -0.02 0.08 16 23 C 0.08 -0.33 6.87 71.98 0.49 0.17 16 24 O -0.60 0.14 13.66 -148.98 -2.04 -1.89 16 25 C -0.14 0.53 7.09 31.18 0.22 0.75 16 26 C -0.10 -0.35 9.69 22.25 0.22 -0.14 16 27 C -0.11 -0.67 8.56 22.38 0.19 -0.48 16 28 H 0.38 2.00 8.60 -74.06 -0.64 1.37 16 29 H 0.12 0.29 7.96 -2.39 -0.02 0.28 16 30 H -0.30 -2.13 7.11 99.48 0.71 -1.42 16 31 H -0.29 -1.80 7.11 99.48 0.71 -1.09 16 32 H 0.17 -0.35 6.59 -2.91 -0.02 -0.37 16 33 H 0.16 -0.03 8.06 -2.91 -0.02 -0.05 16 34 H 0.18 0.15 8.06 -2.91 -0.02 0.12 16 35 H 0.13 0.44 8.06 -2.91 -0.02 0.42 16 36 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 37 H 0.13 -1.17 8.08 -2.39 -0.02 -1.19 16 38 H 0.13 -1.25 8.08 -2.39 -0.02 -1.27 16 39 H 0.42 -2.69 8.19 -92.71 -0.76 -3.45 16 40 H 0.09 -0.17 7.96 -2.38 -0.02 -0.19 16 41 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 42 H 0.12 -1.02 8.06 -2.39 -0.02 -1.04 16 43 H 0.09 -0.37 8.14 -2.38 -0.02 -0.39 16 44 H 0.06 -0.43 7.87 -2.39 -0.02 -0.45 16 45 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 46 H 0.40 -3.39 9.12 -74.06 -0.68 -4.07 16 47 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 48 H 0.11 -0.69 7.75 -2.39 -0.02 -0.71 16 49 H 0.14 -0.04 8.06 -2.91 -0.02 -0.06 16 50 H 0.12 0.71 8.06 -2.91 -0.02 0.69 16 Total: 0.00 -25.64 420.67 -0.44 -26.07 By element: Atomic # 1 Polarization: -12.41 SS G_CDS: -1.05 Total: -13.45 kcal Atomic # 6 Polarization: -1.02 SS G_CDS: 4.94 Total: 3.92 kcal Atomic # 7 Polarization: -1.19 SS G_CDS: -3.48 Total: -4.67 kcal Atomic # 8 Polarization: -11.29 SS G_CDS: -3.72 Total: -15.01 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.76 Total: 0.37 kcal Atomic # 14 Polarization: 0.66 SS G_CDS: 2.11 Total: 2.77 kcal Total: -25.64 -0.44 -26.07 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.341 kcal (2) G-P(sol) polarization free energy of solvation -25.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.073 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds