Wall clock time and date at job start Sun Mar 7 2021 08:58:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.38312 * 120.34781 * 245.00084 * 4 2 1 6 6 N 1.31957 * 121.08205 * 179.97438 * 5 4 2 7 7 C 1.31668 * 121.88089 * 359.97438 * 6 5 4 8 8 C 1.39554 * 120.56379 * 359.97438 * 7 6 5 9 9 C 1.47838 * 120.55996 * 180.02562 * 8 7 6 10 10 O 1.21548 * 120.00336 * 180.02562 * 9 8 7 11 11 N 1.34777 * 120.00173 * 359.97438 * 9 8 7 12 12 C 1.46496 * 120.00262 * 179.97438 * 11 9 8 13 13 C 1.53001 * 109.46935 * 179.97438 * 12 11 9 14 14 F 1.39901 * 112.85101 * 48.80988 * 13 12 11 15 15 C 1.53785 * 113.61022 * 180.02562 * 13 12 11 16 16 C 1.53785 * 87.07828 * 139.98390 * 15 13 12 17 17 H 1.08999 * 113.61300 * 89.11892 * 16 15 13 18 18 C 1.53001 * 113.61443 * 219.93170 * 16 15 13 19 19 O 1.42894 * 109.47281 * 184.99946 * 18 16 15 20 20 C 1.53775 * 87.08294 * 334.56696 * 16 15 13 21 21 C 1.38391 * 120.35001 * 64.72480 * 4 2 1 22 22 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 23 23 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 24 24 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 25 25 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 26 26 H 1.08004 * 119.46059 * 0.02562 * 5 4 2 27 27 H 1.07996 * 119.71586 * 179.97438 * 7 6 5 28 28 H 0.97000 * 119.99502 * 0.02562 * 11 9 8 29 29 H 1.08996 * 109.47475 * 300.00245 * 12 11 9 30 30 H 1.09006 * 109.47046 * 60.00532 * 12 11 9 31 31 H 1.09004 * 113.61472 * 254.52896 * 15 13 12 32 32 H 1.08996 * 113.61622 * 25.43569 * 15 13 12 33 33 H 1.09002 * 109.47219 * 305.00245 * 18 16 15 34 34 H 1.09002 * 109.47039 * 64.99938 * 18 16 15 35 35 H 0.96700 * 114.00204 * 180.02562 * 19 18 16 36 36 H 1.09004 * 113.61548 * 270.88958 * 20 16 15 37 37 H 1.08994 * 113.61946 * 139.98072 * 20 16 15 38 38 H 1.08005 * 120.85730 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6397 -0.0187 2.1964 6 7 3.0857 -0.6261 3.2797 7 6 2.8795 -1.9090 3.4924 8 6 2.1724 -2.6772 2.5665 9 6 1.9404 -4.1175 2.8057 10 8 1.3236 -4.7772 1.9922 11 7 2.4136 -4.6995 3.9255 12 6 2.1832 -6.1266 4.1629 13 6 2.8194 -6.5313 5.4941 14 9 2.4836 -5.6671 6.5418 15 6 2.6339 -8.0186 5.8385 16 6 4.0822 -7.9987 6.3550 17 1 4.1669 -7.7268 7.4071 18 6 4.8765 -9.2575 6.0010 19 8 6.1637 -9.1980 6.6186 20 6 4.3259 -6.8236 5.3935 21 6 1.6835 -2.0601 1.4089 22 1 -0.3934 0.4417 0.7649 23 1 1.7924 -0.5139 -0.8899 24 1 3.5346 1.7703 0.0322 25 1 1.5616 2.4678 -1.2086 26 1 2.8303 1.0358 2.0622 27 1 3.2607 -2.3706 4.3913 28 1 2.9061 -4.1731 4.5745 29 1 1.1112 -6.3207 4.1981 30 1 2.6310 -6.7062 3.3555 31 1 1.8944 -8.1971 6.6192 32 1 2.4905 -8.6545 4.9649 33 1 4.3419 -10.1373 6.3594 34 1 4.9951 -9.3201 4.9193 35 1 6.7233 -9.9654 6.4365 36 1 4.6450 -7.1328 4.3981 37 1 4.9522 -6.0373 5.8147 38 1 1.1295 -2.6236 0.6726 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13287814.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:20 Heat of formation + Delta-G solvation = -97.225773 kcal Electronic energy + Delta-G solvation = -23498.430228 eV Core-core repulsion = 19643.997312 eV Total energy + Delta-G solvation = -3854.432916 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.92606 -41.92057 -40.46197 -39.81513 -37.99372 -37.32079 -35.78731 -33.79193 -33.28576 -30.37960 -27.64213 -27.32609 -27.19336 -25.28721 -23.88132 -22.38809 -21.72120 -20.82200 -19.39097 -18.44706 -18.28727 -18.10783 -17.74825 -17.26350 -16.98431 -16.64192 -16.47332 -16.36607 -16.11006 -15.83131 -15.57400 -15.08850 -14.82421 -14.77553 -14.39471 -14.25323 -14.20140 -13.84386 -13.62296 -13.56966 -13.33864 -12.77668 -12.52591 -12.16690 -12.04167 -11.69565 -11.48379 -11.34953 -11.07457 -10.99335 -10.65274 -10.59820 -10.42889 -10.25138 -5.16920 -0.61387 -0.05272 1.10827 1.50786 1.66634 1.78112 1.88020 2.59771 2.84438 2.93617 2.95434 3.04286 3.18165 3.28035 3.33500 3.37625 3.57329 3.61971 3.66763 3.71039 4.06113 4.07346 4.15584 4.17019 4.29014 4.36427 4.38083 4.39566 4.46465 4.50324 4.66847 4.75074 4.80114 4.80362 4.87456 5.08465 5.22356 5.27581 6.20189 6.41506 6.56255 6.59523 6.96688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.180 4.180 5 C 0.130 3.870 6 N -0.477 5.477 7 C 0.141 3.859 8 C -0.189 4.189 9 C 0.567 3.433 10 O -0.527 6.527 11 N -0.723 5.723 12 C 0.114 3.886 13 C 0.079 3.921 14 F -0.183 7.183 15 C -0.142 4.142 16 C -0.108 4.108 17 H 0.106 0.894 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.147 4.147 21 C 0.013 3.987 22 H 0.381 0.619 23 H 0.120 0.880 24 H -0.253 1.253 25 H -0.248 1.248 26 H 0.164 0.836 27 H 0.161 0.839 28 H 0.404 0.596 29 H 0.085 0.915 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.106 0.894 33 H 0.051 0.949 34 H 0.050 0.950 35 H 0.382 0.618 36 H 0.102 0.898 37 H 0.086 0.914 38 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.158 -0.910 1.824 2.345 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.182 4.182 5 C -0.026 4.026 6 N -0.184 5.184 7 C -0.017 4.017 8 C -0.194 4.194 9 C 0.354 3.646 10 O -0.404 6.404 11 N -0.376 5.376 12 C -0.010 4.010 13 C 0.060 3.940 14 F -0.163 7.163 15 C -0.180 4.180 16 C -0.127 4.127 17 H 0.124 0.876 18 C 0.007 3.993 19 O -0.379 6.379 20 C -0.184 4.184 21 C -0.014 4.014 22 H 0.228 0.772 23 H 0.137 0.863 24 H -0.177 1.177 25 H -0.173 1.173 26 H 0.180 0.820 27 H 0.179 0.821 28 H 0.240 0.760 29 H 0.103 0.897 30 H 0.111 0.889 31 H 0.109 0.891 32 H 0.124 0.876 33 H 0.069 0.931 34 H 0.068 0.932 35 H 0.230 0.770 36 H 0.121 0.879 37 H 0.104 0.896 38 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 1.501 -0.039 1.125 1.876 hybrid contribution 0.037 -1.399 -0.486 1.481 sum 1.538 -1.438 0.639 2.200 Atomic orbital electron populations 1.86549 1.16617 1.81652 1.49284 1.25031 0.85593 1.10330 0.96599 0.94853 0.81203 0.77177 0.88000 1.21436 1.02036 0.95455 0.99285 1.22887 0.91437 0.99871 0.88393 1.67730 1.19422 1.10465 1.20801 1.23055 0.91986 0.89517 0.97180 1.20984 1.05033 0.94870 0.98496 1.17982 0.78854 0.86491 0.81314 1.90827 1.40138 1.64477 1.44949 1.45711 1.58127 1.10725 1.22999 1.21849 1.02264 0.81643 0.95263 1.22079 0.97465 0.89960 0.84475 1.92888 1.93422 1.71151 1.58868 1.23553 0.97525 0.93712 1.03178 1.22510 0.94143 0.94927 1.01089 0.87623 1.22138 0.84036 0.96903 0.96174 1.86486 1.27277 1.48167 1.75962 1.23723 0.93879 0.99392 1.01429 1.21633 0.91650 0.93265 0.94814 0.77185 0.86289 1.17720 1.17266 0.81973 0.82146 0.75957 0.89707 0.88948 0.89071 0.87560 0.93110 0.93226 0.77033 0.87922 0.89561 0.82992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.24 12.84 -35.23 -0.45 -0.22 16 2 C -0.06 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.69 -1.49 29.83 -169.99 -5.07 -6.56 16 4 C -0.18 0.07 5.35 -104.54 -0.56 -0.49 16 5 C 0.13 -0.07 9.84 -17.47 -0.17 -0.24 16 6 N -0.48 -0.41 10.35 -12.91 -0.13 -0.54 16 7 C 0.14 -0.03 10.71 -17.13 -0.18 -0.21 16 8 C -0.19 -0.16 5.89 -104.82 -0.62 -0.78 16 9 C 0.57 1.07 7.78 -12.33 -0.10 0.97 16 10 O -0.53 -2.84 16.42 5.32 0.09 -2.75 16 11 N -0.72 0.47 5.42 -61.25 -0.33 0.13 16 12 C 0.11 -0.14 5.37 -4.04 -0.02 -0.16 16 13 C 0.08 -0.14 1.67 -89.80 -0.15 -0.29 16 14 F -0.18 -0.09 16.80 2.25 0.04 -0.06 16 15 C -0.14 0.39 7.10 -25.91 -0.18 0.21 16 16 C -0.11 0.17 3.98 -89.81 -0.36 -0.18 16 17 H 0.11 -0.02 8.14 -51.93 -0.42 -0.44 16 18 C 0.09 -0.17 6.89 37.16 0.26 0.09 16 19 O -0.57 0.12 13.66 -35.23 -0.48 -0.36 16 20 C -0.15 0.30 7.08 -25.92 -0.18 0.12 16 21 C 0.01 0.01 9.38 -38.87 -0.36 -0.35 16 22 H 0.38 -1.66 8.70 45.56 0.40 -1.27 16 23 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 24 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 25 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 26 H 0.16 -0.48 4.91 -52.48 -0.26 -0.74 16 27 H 0.16 -0.47 6.42 -52.49 -0.34 -0.81 16 28 H 0.40 -0.98 6.25 -40.82 -0.26 -1.23 16 29 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.09 -0.16 7.94 -51.93 -0.41 -0.57 16 31 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.11 -0.46 8.06 -51.93 -0.42 -0.88 16 33 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.05 -0.16 7.85 -51.93 -0.41 -0.56 16 35 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 36 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 37 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.15 0.25 7.74 -52.48 -0.41 -0.16 16 LS Contribution 326.76 15.07 4.92 4.92 Total: 0.00 -9.66 326.76 -7.76 -17.42 By element: Atomic # 1 Polarization: -7.04 SS G_CDS: -3.81 Total: -10.85 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -2.53 Total: -1.15 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -0.47 Total: -0.41 kcal Atomic # 8 Polarization: -2.47 SS G_CDS: -0.85 Total: -3.32 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.04 Total: -0.06 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.07 Total: -6.56 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -9.66 -7.76 -17.42 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287814.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.803 kcal (2) G-P(sol) polarization free energy of solvation -9.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.422 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.226 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds