Wall clock time and date at job start Sun Mar 7 2021 08:58:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.38312 * 120.34781 * 245.00084 * 4 2 1 6 6 N 1.31957 * 121.08205 * 179.97438 * 5 4 2 7 7 C 1.31668 * 121.88089 * 359.97438 * 6 5 4 8 8 C 1.39554 * 120.56379 * 359.97438 * 7 6 5 9 9 C 1.47838 * 120.55996 * 180.02562 * 8 7 6 10 10 O 1.21548 * 120.00336 * 180.02562 * 9 8 7 11 11 N 1.34777 * 120.00173 * 359.97438 * 9 8 7 12 12 C 1.46496 * 120.00262 * 179.97438 * 11 9 8 13 13 C 1.53001 * 109.46935 * 179.97438 * 12 11 9 14 14 F 1.39901 * 112.85101 * 48.80988 * 13 12 11 15 15 C 1.53785 * 113.61022 * 180.02562 * 13 12 11 16 16 C 1.53785 * 87.07828 * 139.98390 * 15 13 12 17 17 H 1.08999 * 113.61300 * 89.11892 * 16 15 13 18 18 C 1.53001 * 113.61443 * 219.93170 * 16 15 13 19 19 O 1.42894 * 109.47281 * 184.99946 * 18 16 15 20 20 C 1.53775 * 87.08294 * 334.56696 * 16 15 13 21 21 C 1.38391 * 120.35001 * 64.72480 * 4 2 1 22 22 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 23 23 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 24 24 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 25 25 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 26 26 H 1.08004 * 119.46059 * 0.02562 * 5 4 2 27 27 H 1.07996 * 119.71586 * 179.97438 * 7 6 5 28 28 H 0.97000 * 119.99502 * 0.02562 * 11 9 8 29 29 H 1.08996 * 109.47475 * 300.00245 * 12 11 9 30 30 H 1.09006 * 109.47046 * 60.00532 * 12 11 9 31 31 H 1.09004 * 113.61472 * 254.52896 * 15 13 12 32 32 H 1.08996 * 113.61622 * 25.43569 * 15 13 12 33 33 H 1.09002 * 109.47219 * 305.00245 * 18 16 15 34 34 H 1.09002 * 109.47039 * 64.99938 * 18 16 15 35 35 H 0.96700 * 114.00204 * 180.02562 * 19 18 16 36 36 H 1.09004 * 113.61548 * 270.88958 * 20 16 15 37 37 H 1.08994 * 113.61946 * 139.98072 * 20 16 15 38 38 H 1.08005 * 120.85730 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6397 -0.0187 2.1964 6 7 3.0857 -0.6261 3.2797 7 6 2.8795 -1.9090 3.4924 8 6 2.1724 -2.6772 2.5665 9 6 1.9404 -4.1175 2.8057 10 8 1.3236 -4.7772 1.9922 11 7 2.4136 -4.6995 3.9255 12 6 2.1832 -6.1266 4.1629 13 6 2.8194 -6.5313 5.4941 14 9 2.4836 -5.6671 6.5418 15 6 2.6339 -8.0186 5.8385 16 6 4.0822 -7.9987 6.3550 17 1 4.1669 -7.7268 7.4071 18 6 4.8765 -9.2575 6.0010 19 8 6.1637 -9.1980 6.6186 20 6 4.3259 -6.8236 5.3935 21 6 1.6835 -2.0601 1.4089 22 1 -0.3934 0.4417 0.7649 23 1 1.7924 -0.5139 -0.8899 24 1 3.5346 1.7703 0.0322 25 1 1.5616 2.4678 -1.2086 26 1 2.8303 1.0358 2.0622 27 1 3.2607 -2.3706 4.3913 28 1 2.9061 -4.1731 4.5745 29 1 1.1112 -6.3207 4.1981 30 1 2.6310 -6.7062 3.3555 31 1 1.8944 -8.1971 6.6192 32 1 2.4905 -8.6545 4.9649 33 1 4.3419 -10.1373 6.3594 34 1 4.9951 -9.3201 4.9193 35 1 6.7233 -9.9654 6.4365 36 1 4.6450 -7.1328 4.3981 37 1 4.9522 -6.0373 5.8147 38 1 1.1295 -2.6236 0.6726 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13287814.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:20 Heat of formation + Delta-G solvation = -102.042646 kcal Electronic energy + Delta-G solvation = -23498.639104 eV Core-core repulsion = 19643.997312 eV Total energy + Delta-G solvation = -3854.641791 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.121 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -48.89153 -41.94764 -40.48348 -39.74164 -37.94170 -37.22029 -35.84254 -33.80902 -33.27575 -30.30375 -27.54577 -27.27919 -27.01410 -25.27183 -23.88075 -22.28496 -21.76209 -20.68786 -19.39443 -18.36571 -18.21266 -18.07301 -17.73543 -17.17650 -16.95236 -16.60009 -16.44077 -16.30136 -16.12271 -15.82253 -15.49893 -15.00056 -14.79251 -14.78031 -14.39423 -14.26246 -14.19161 -13.78196 -13.52374 -13.42862 -13.21205 -12.73752 -12.39764 -12.19544 -11.91959 -11.67419 -11.36452 -11.33809 -11.12395 -10.82587 -10.63952 -10.60741 -10.44147 -10.23118 -5.02673 -0.62166 -0.07044 1.21969 1.57666 1.62271 1.79219 1.96621 2.58347 3.00836 3.03738 3.09904 3.16317 3.33373 3.35425 3.43444 3.51326 3.62344 3.70349 3.71654 3.81317 4.07188 4.20013 4.24406 4.34715 4.43182 4.45569 4.53573 4.59463 4.62527 4.70890 4.79048 4.83185 4.87281 4.90454 4.97396 5.11018 5.28952 5.36735 6.19567 6.60468 6.69840 6.88049 6.89706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.073 4.073 3 Si 0.783 3.217 4 C -0.176 4.176 5 C 0.132 3.868 6 N -0.493 5.493 7 C 0.146 3.854 8 C -0.198 4.198 9 C 0.567 3.433 10 O -0.569 6.569 11 N -0.711 5.711 12 C 0.113 3.887 13 C 0.079 3.921 14 F -0.197 7.197 15 C -0.134 4.134 16 C -0.114 4.114 17 H 0.086 0.914 18 C 0.083 3.917 19 O -0.599 6.599 20 C -0.143 4.143 21 C 0.000 4.000 22 H 0.397 0.603 23 H 0.112 0.888 24 H -0.277 1.277 25 H -0.294 1.294 26 H 0.187 0.813 27 H 0.185 0.815 28 H 0.414 0.586 29 H 0.078 0.922 30 H 0.101 0.899 31 H 0.089 0.911 32 H 0.126 0.874 33 H 0.058 0.942 34 H 0.064 0.936 35 H 0.397 0.603 36 H 0.115 0.885 37 H 0.079 0.921 38 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.591 -0.742 2.241 2.847 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.183 4.183 3 Si 0.687 3.313 4 C -0.178 4.178 5 C -0.024 4.024 6 N -0.201 5.201 7 C -0.012 4.012 8 C -0.203 4.203 9 C 0.355 3.645 10 O -0.449 6.449 11 N -0.363 5.363 12 C -0.011 4.011 13 C 0.061 3.939 14 F -0.178 7.178 15 C -0.171 4.171 16 C -0.132 4.132 17 H 0.104 0.896 18 C 0.005 3.995 19 O -0.408 6.408 20 C -0.180 4.180 21 C -0.027 4.027 22 H 0.247 0.753 23 H 0.130 0.870 24 H -0.204 1.204 25 H -0.222 1.222 26 H 0.203 0.797 27 H 0.202 0.798 28 H 0.251 0.749 29 H 0.096 0.904 30 H 0.119 0.881 31 H 0.108 0.892 32 H 0.144 0.856 33 H 0.077 0.923 34 H 0.082 0.918 35 H 0.247 0.753 36 H 0.133 0.867 37 H 0.098 0.902 38 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.942 0.105 1.598 2.517 hybrid contribution -0.095 -1.459 -0.632 1.593 sum 1.847 -1.354 0.966 2.485 Atomic orbital electron populations 1.86512 1.16941 1.82182 1.50540 1.25241 0.85513 1.11456 0.96043 0.93760 0.78041 0.73951 0.85548 1.21465 1.01913 0.94844 0.99590 1.23252 0.90509 1.00873 0.87753 1.67803 1.20031 1.10838 1.21414 1.23379 0.91126 0.89234 0.97496 1.20955 1.05889 0.94474 0.98952 1.18148 0.78304 0.86776 0.81303 1.90801 1.42275 1.65406 1.46462 1.45669 1.57175 1.11160 1.22322 1.21919 1.02035 0.81294 0.95809 1.22148 0.97770 0.90337 0.83686 1.92858 1.93577 1.71752 1.59569 1.23573 0.96700 0.93043 1.03831 1.22486 0.95133 0.95494 1.00119 0.89557 1.22233 0.83443 0.96819 0.96957 1.86440 1.28250 1.49524 1.76538 1.23736 0.93326 0.99015 1.01927 1.21660 0.92077 0.94010 0.94910 0.75277 0.87032 1.20381 1.22197 0.79670 0.79811 0.74865 0.90391 0.88106 0.89219 0.85578 0.92330 0.91756 0.75297 0.86655 0.90238 0.84320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.33 12.84 -148.98 -1.91 -1.58 16 2 C -0.07 0.14 2.82 71.24 0.20 0.34 16 3 Si 0.78 -3.69 29.83 68.60 2.05 -1.65 16 4 C -0.18 0.11 5.35 -19.81 -0.11 0.00 16 5 C 0.13 -0.23 9.84 84.69 0.83 0.60 16 6 N -0.49 -0.48 10.35 -194.76 -2.01 -2.49 16 7 C 0.15 -0.12 10.71 85.03 0.91 0.79 16 8 C -0.20 -0.46 5.89 -19.99 -0.12 -0.57 16 9 C 0.57 2.62 7.78 86.78 0.68 3.30 16 10 O -0.57 -7.01 16.42 -3.87 -0.06 -7.07 16 11 N -0.71 0.78 5.42 -465.99 -2.53 -1.75 16 12 C 0.11 -0.27 5.37 86.38 0.46 0.19 16 13 C 0.08 -0.28 1.67 -10.27 -0.02 -0.30 16 14 F -0.20 -0.26 16.80 44.97 0.76 0.49 16 15 C -0.13 0.80 7.10 31.12 0.22 1.02 16 16 C -0.11 0.37 3.98 -10.27 -0.04 0.33 16 17 H 0.09 0.05 8.14 -2.39 -0.02 0.04 16 18 C 0.08 -0.38 6.89 71.98 0.50 0.12 16 19 O -0.60 0.32 13.66 -148.98 -2.03 -1.72 16 20 C -0.14 0.63 7.08 31.12 0.22 0.85 16 21 C 0.00 0.00 9.38 22.73 0.21 0.21 16 22 H 0.40 -3.56 8.70 -74.06 -0.64 -4.20 16 23 H 0.11 -0.08 7.96 -2.39 -0.02 -0.10 16 24 H -0.28 0.14 7.11 99.48 0.71 0.85 16 25 H -0.29 -0.90 7.11 99.48 0.71 -0.20 16 26 H 0.19 -1.38 4.91 -2.91 -0.01 -1.39 16 27 H 0.19 -1.25 6.42 -2.91 -0.02 -1.27 16 28 H 0.41 -2.09 6.25 -92.71 -0.58 -2.67 16 29 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.10 -0.38 7.94 -2.38 -0.02 -0.40 16 31 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 32 H 0.13 -1.25 8.06 -2.39 -0.02 -1.27 16 33 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 34 H 0.06 -0.49 7.85 -2.39 -0.02 -0.51 16 35 H 0.40 -3.49 9.12 -74.06 -0.68 -4.16 16 36 H 0.12 -0.80 7.72 -2.38 -0.02 -0.82 16 37 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.14 0.76 7.74 -2.91 -0.02 0.74 16 Total: 0.00 -22.92 326.76 -2.53 -25.45 By element: Atomic # 1 Polarization: -15.84 SS G_CDS: -0.73 Total: -16.57 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: 3.95 Total: 6.88 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -4.54 Total: -4.24 kcal Atomic # 8 Polarization: -6.36 SS G_CDS: -4.01 Total: -10.37 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.76 Total: 0.49 kcal Atomic # 14 Polarization: -3.69 SS G_CDS: 2.05 Total: -1.65 kcal Total: -22.92 -2.53 -25.45 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13287814.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.596 kcal (2) G-P(sol) polarization free energy of solvation -22.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds