Wall clock time and date at job start Sun Mar 7 2021 08:58:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50691 * 1 3 3 C 1.36420 * 125.80334 * 2 1 4 4 C 1.47372 * 127.19077 * 359.97438 * 3 2 1 5 5 O 1.21610 * 120.00164 * 0.02562 * 4 3 2 6 6 N 1.34784 * 120.00059 * 180.02562 * 4 3 2 7 7 C 1.46493 * 119.99864 * 179.72884 * 6 4 3 8 8 C 1.53001 * 109.47084 * 180.02562 * 7 6 4 9 9 F 1.39902 * 112.84699 * 316.18946 * 8 7 6 10 10 C 1.53783 * 113.61829 * 87.49795 * 8 7 6 11 11 C 1.53776 * 87.07920 * 139.98322 * 10 8 7 12 12 H 1.09000 * 113.61991 * 89.12253 * 11 10 8 13 13 C 1.53003 * 113.69056 * 220.01149 * 11 10 8 14 14 O 1.42900 * 109.46937 * 272.53757 * 13 11 10 15 15 C 1.53779 * 87.08750 * 334.56748 * 11 10 8 16 16 C 1.47023 * 105.61489 * 180.26165 * 3 2 1 17 17 C 1.34176 * 105.95524 * 359.56595 * 16 3 2 18 18 C 1.50702 * 125.44051 * 180.14357 * 17 16 3 19 19 O 1.42900 * 109.46986 * 65.31561 * 18 17 16 20 20 Si 1.86291 * 109.47232 * 185.31519 * 18 17 16 21 21 O 1.33653 * 125.80227 * 179.97438 * 2 1 3 22 22 H 1.09005 * 109.46981 * 89.99935 * 1 2 3 23 23 H 1.09004 * 109.47310 * 209.99964 * 1 2 3 24 24 H 1.09001 * 109.47149 * 330.00174 * 1 2 3 25 25 H 0.97000 * 119.99339 * 0.02562 * 6 4 3 26 26 H 1.09007 * 109.47196 * 299.99538 * 7 6 4 27 27 H 1.09006 * 109.47678 * 59.99732 * 7 6 4 28 28 H 1.08999 * 113.61235 * 254.53045 * 10 8 7 29 29 H 1.08997 * 113.60961 * 25.43823 * 10 8 7 30 30 H 1.08998 * 109.46889 * 32.53244 * 13 11 10 31 31 H 1.08990 * 109.47433 * 152.53871 * 13 11 10 32 32 H 0.96699 * 114.00427 * 179.97438 * 14 13 11 33 33 H 1.09001 * 113.61793 * 270.88820 * 15 11 10 34 34 H 1.08994 * 113.69516 * 139.98802 * 15 11 10 35 35 H 1.08005 * 127.02043 * 179.73667 * 16 3 2 36 36 H 1.09002 * 109.46951 * 305.31817 * 18 17 16 37 37 H 0.96698 * 114.00149 * 179.97438 * 19 18 17 38 38 H 1.48500 * 110.00496 * 300.00058 * 20 18 17 39 39 H 1.48500 * 110.00302 * 61.32402 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 -0.0005 5 8 0.6890 2.7892 -0.0006 6 7 2.7931 3.5015 -0.0010 7 6 2.3646 4.9024 -0.0075 8 6 3.5948 5.8120 -0.0073 9 9 4.5821 5.3902 0.8898 10 6 4.1310 6.1236 -1.4145 11 6 4.3702 7.5598 -0.9198 12 1 5.3524 7.7094 -0.4715 13 6 4.0192 8.6324 -1.9530 14 8 5.1523 8.8778 -2.7884 15 6 3.2553 7.3074 0.1089 16 6 3.6849 0.5990 -0.0065 17 6 3.5859 -0.7391 0.0001 18 6 4.7458 -1.7011 0.0001 19 8 5.4763 -1.5665 1.2209 20 14 4.1068 -3.4444 -0.1521 21 8 2.2888 -1.0840 0.0005 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3633 0.8900 0.5138 25 1 3.7382 3.2833 -0.0013 26 1 1.7700 5.0964 -0.9003 27 1 1.7639 5.1029 0.8797 28 1 5.0480 5.5882 -1.6608 29 1 3.3744 6.0512 -2.1958 30 1 3.1848 8.2887 -2.5643 31 1 3.7394 9.5527 -1.4406 32 1 5.0016 9.5483 -3.4687 33 1 2.2594 7.5587 -0.2559 34 1 3.4640 7.7274 1.0928 35 1 4.5928 1.1840 -0.0122 36 1 5.4016 -1.4797 -0.8420 37 1 6.2387 -2.1573 1.2903 38 1 3.2114 -3.7588 0.9901 39 1 3.3724 -3.6062 -1.4326 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13308374.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:23 Heat of formation + Delta-G solvation = -122.492938 kcal Electronic energy + Delta-G solvation = -24434.090887 eV Core-core repulsion = 20453.532164 eV Total energy + Delta-G solvation = -3980.558723 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.125 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -48.86649 -43.73960 -40.53490 -39.79260 -37.99814 -37.27714 -35.60007 -34.12530 -33.21272 -30.55103 -29.38357 -27.46099 -27.13198 -25.57445 -24.02139 -22.49884 -21.90127 -20.96953 -20.52309 -18.81358 -18.45790 -18.37954 -17.51161 -17.30360 -17.13688 -16.89709 -16.53174 -16.35901 -15.86491 -15.81464 -15.75303 -15.34674 -14.99913 -14.64528 -14.24985 -14.19501 -14.09589 -14.07475 -13.86359 -13.78993 -13.54488 -13.29304 -13.11355 -12.56900 -12.46141 -12.09523 -11.99538 -11.59533 -11.42373 -11.02426 -10.93772 -10.86982 -10.54240 -10.16545 -9.54738 -5.13521 0.29301 0.83182 1.09892 1.49190 1.63405 1.98979 2.05919 2.35032 2.89570 3.00300 3.06996 3.18920 3.23976 3.41748 3.52013 3.65807 3.73049 3.77734 4.10203 4.13887 4.17678 4.21366 4.33333 4.39502 4.42604 4.43336 4.51498 4.53272 4.54741 4.65168 4.71826 4.78462 4.82767 4.85666 5.09098 5.21883 5.23073 5.35094 5.93027 6.41668 6.43965 6.58642 7.19145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.095 3.905 3 C -0.252 4.252 4 C 0.596 3.404 5 O -0.539 6.539 6 N -0.722 5.722 7 C 0.115 3.885 8 C 0.080 3.920 9 F -0.183 7.183 10 C -0.146 4.146 11 C -0.108 4.108 12 H 0.105 0.895 13 C 0.086 3.914 14 O -0.573 6.573 15 C -0.142 4.142 16 C -0.142 4.142 17 C -0.014 4.014 18 C -0.035 4.035 19 O -0.543 6.543 20 Si 0.709 3.291 21 O -0.175 6.175 22 H 0.093 0.907 23 H 0.080 0.920 24 H 0.113 0.887 25 H 0.405 0.595 26 H 0.090 0.910 27 H 0.083 0.917 28 H 0.085 0.915 29 H 0.102 0.898 30 H 0.050 0.950 31 H 0.051 0.949 32 H 0.382 0.618 33 H 0.106 0.894 34 H 0.090 0.910 35 H 0.160 0.840 36 H 0.096 0.904 37 H 0.391 0.609 38 H -0.249 1.249 39 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.705 -0.255 -2.636 3.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.042 3.958 3 C -0.256 4.256 4 C 0.385 3.615 5 O -0.418 6.418 6 N -0.374 5.374 7 C -0.009 4.009 8 C 0.061 3.939 9 F -0.164 7.164 10 C -0.183 4.183 11 C -0.127 4.127 12 H 0.123 0.877 13 C 0.008 3.992 14 O -0.379 6.379 15 C -0.180 4.180 16 C -0.161 4.161 17 C -0.061 4.061 18 C -0.145 4.145 19 O -0.351 6.351 20 Si 0.608 3.392 21 O -0.073 6.073 22 H 0.111 0.889 23 H 0.099 0.901 24 H 0.131 0.869 25 H 0.241 0.759 26 H 0.108 0.892 27 H 0.101 0.899 28 H 0.103 0.897 29 H 0.121 0.879 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.229 0.771 33 H 0.124 0.876 34 H 0.109 0.891 35 H 0.178 0.822 36 H 0.113 0.887 37 H 0.240 0.760 38 H -0.173 1.173 39 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 0.892 -0.871 -2.183 2.514 hybrid contribution 0.459 1.109 -0.283 1.233 sum 1.351 0.237 -2.466 2.821 Atomic orbital electron populations 1.20712 0.83234 1.05489 1.04780 1.22936 0.94073 0.82760 0.96010 1.21058 0.93230 0.93639 1.17692 1.17095 0.85241 0.83612 0.75538 1.90776 1.16429 1.83991 1.50579 1.45581 1.10293 1.05424 1.76084 1.21817 0.95129 0.79687 1.04284 1.22082 0.86664 0.94947 0.90200 1.92879 1.63182 1.91116 1.69196 1.23724 1.02965 0.96661 0.94991 1.22507 1.00245 0.94096 0.95821 0.87679 1.22139 0.88038 0.97394 0.91654 1.86488 1.38317 1.63734 1.49352 1.23559 1.00362 0.92871 1.01214 1.22563 0.96498 0.93250 1.03780 1.21054 0.82081 0.94186 1.08822 1.23803 0.91708 1.08340 0.90640 1.86470 1.45966 1.66204 1.36426 0.95264 0.85162 0.77418 0.81323 1.83695 1.16506 1.35334 1.71747 0.88894 0.90077 0.86893 0.75929 0.89162 0.89914 0.89656 0.87944 0.93215 0.93122 0.77065 0.87583 0.89136 0.82213 0.88678 0.76009 1.17311 1.17706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.13 9.89 36.00 0.36 0.23 16 2 C 0.10 0.36 7.37 -34.97 -0.26 0.11 16 3 C -0.25 -0.96 6.31 -103.28 -0.65 -1.61 16 4 C 0.60 2.39 7.81 -12.54 -0.10 2.29 16 5 O -0.54 -3.36 14.84 5.27 0.08 -3.28 16 6 N -0.72 -1.08 5.45 -61.40 -0.33 -1.42 16 7 C 0.11 0.02 5.42 -4.04 -0.02 0.00 16 8 C 0.08 -0.04 1.74 -89.80 -0.16 -0.20 16 9 F -0.18 -0.34 16.59 2.25 0.04 -0.30 16 10 C -0.15 0.16 7.08 -25.92 -0.18 -0.02 16 11 C -0.11 0.10 3.98 -89.81 -0.36 -0.26 16 12 H 0.11 0.05 8.14 -51.93 -0.42 -0.37 16 13 C 0.09 -0.13 6.89 37.16 0.26 0.13 16 14 O -0.57 -0.10 13.66 -35.23 -0.48 -0.58 16 15 C -0.14 0.27 7.10 -25.92 -0.18 0.09 16 16 C -0.14 -0.36 10.48 -37.45 -0.39 -0.75 16 17 C -0.01 -0.04 6.22 -35.74 -0.22 -0.26 16 18 C -0.04 0.01 2.96 36.01 0.11 0.12 16 19 O -0.54 0.24 12.86 -35.23 -0.45 -0.21 16 20 Si 0.71 -0.70 32.09 -169.99 -5.46 -6.15 16 21 O -0.18 -0.76 8.90 7.64 0.07 -0.69 16 22 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 23 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 24 H 0.11 0.27 6.49 -51.93 -0.34 -0.07 16 25 H 0.41 0.12 7.20 -40.82 -0.29 -0.18 16 26 H 0.09 -0.04 7.84 -51.93 -0.41 -0.45 16 27 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 28 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.10 -0.21 7.65 -51.93 -0.40 -0.61 16 30 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 31 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 33 H 0.11 -0.38 8.06 -51.93 -0.42 -0.79 16 34 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.16 0.03 7.74 -52.48 -0.41 -0.37 16 36 H 0.10 -0.28 7.96 -51.93 -0.41 -0.70 16 37 H 0.39 -2.33 8.74 45.56 0.40 -1.93 16 38 H -0.25 -0.75 7.11 56.52 0.40 -0.34 16 39 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 LS Contribution 337.50 15.07 5.09 5.09 Total: 0.00 -10.32 337.50 -7.69 -18.00 By element: Atomic # 1 Polarization: -5.87 SS G_CDS: -4.42 Total: -10.29 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.81 Total: -0.15 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: -0.33 Total: -1.42 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.79 Total: -4.77 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.46 Total: -6.15 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -10.32 -7.69 -18.00 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13308374.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.492 kcal (2) G-P(sol) polarization free energy of solvation -10.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.685 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.001 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds