Wall clock time and date at job start Sun Mar 7 2021 08:58:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50691 * 1 3 3 C 1.36420 * 125.80334 * 2 1 4 4 C 1.47372 * 127.19077 * 359.97438 * 3 2 1 5 5 O 1.21610 * 120.00164 * 0.02562 * 4 3 2 6 6 N 1.34784 * 120.00059 * 180.02562 * 4 3 2 7 7 C 1.46493 * 119.99864 * 179.72884 * 6 4 3 8 8 C 1.53001 * 109.47084 * 180.02562 * 7 6 4 9 9 F 1.39902 * 112.84699 * 316.18946 * 8 7 6 10 10 C 1.53783 * 113.61829 * 87.49795 * 8 7 6 11 11 C 1.53776 * 87.07920 * 139.98322 * 10 8 7 12 12 H 1.09000 * 113.61991 * 89.12253 * 11 10 8 13 13 C 1.53003 * 113.69056 * 220.01149 * 11 10 8 14 14 O 1.42900 * 109.46937 * 272.53757 * 13 11 10 15 15 C 1.53779 * 87.08750 * 334.56748 * 11 10 8 16 16 C 1.47023 * 105.61489 * 180.26165 * 3 2 1 17 17 C 1.34176 * 105.95524 * 359.56595 * 16 3 2 18 18 C 1.50702 * 125.44051 * 180.14357 * 17 16 3 19 19 O 1.42900 * 109.46986 * 65.31561 * 18 17 16 20 20 Si 1.86291 * 109.47232 * 185.31519 * 18 17 16 21 21 O 1.33653 * 125.80227 * 179.97438 * 2 1 3 22 22 H 1.09005 * 109.46981 * 89.99935 * 1 2 3 23 23 H 1.09004 * 109.47310 * 209.99964 * 1 2 3 24 24 H 1.09001 * 109.47149 * 330.00174 * 1 2 3 25 25 H 0.97000 * 119.99339 * 0.02562 * 6 4 3 26 26 H 1.09007 * 109.47196 * 299.99538 * 7 6 4 27 27 H 1.09006 * 109.47678 * 59.99732 * 7 6 4 28 28 H 1.08999 * 113.61235 * 254.53045 * 10 8 7 29 29 H 1.08997 * 113.60961 * 25.43823 * 10 8 7 30 30 H 1.08998 * 109.46889 * 32.53244 * 13 11 10 31 31 H 1.08990 * 109.47433 * 152.53871 * 13 11 10 32 32 H 0.96699 * 114.00427 * 179.97438 * 14 13 11 33 33 H 1.09001 * 113.61793 * 270.88820 * 15 11 10 34 34 H 1.08994 * 113.69516 * 139.98802 * 15 11 10 35 35 H 1.08005 * 127.02043 * 179.73667 * 16 3 2 36 36 H 1.09002 * 109.46951 * 305.31817 * 18 17 16 37 37 H 0.96698 * 114.00149 * 179.97438 * 19 18 17 38 38 H 1.48500 * 110.00496 * 300.00058 * 20 18 17 39 39 H 1.48500 * 110.00302 * 61.32402 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 -0.0005 5 8 0.6890 2.7892 -0.0006 6 7 2.7931 3.5015 -0.0010 7 6 2.3646 4.9024 -0.0075 8 6 3.5948 5.8120 -0.0073 9 9 4.5821 5.3902 0.8898 10 6 4.1310 6.1236 -1.4145 11 6 4.3702 7.5598 -0.9198 12 1 5.3524 7.7094 -0.4715 13 6 4.0192 8.6324 -1.9530 14 8 5.1523 8.8778 -2.7884 15 6 3.2553 7.3074 0.1089 16 6 3.6849 0.5990 -0.0065 17 6 3.5859 -0.7391 0.0001 18 6 4.7458 -1.7011 0.0001 19 8 5.4763 -1.5665 1.2209 20 14 4.1068 -3.4444 -0.1521 21 8 2.2888 -1.0840 0.0005 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3633 0.8900 0.5138 25 1 3.7382 3.2833 -0.0013 26 1 1.7700 5.0964 -0.9003 27 1 1.7639 5.1029 0.8797 28 1 5.0480 5.5882 -1.6608 29 1 3.3744 6.0512 -2.1958 30 1 3.1848 8.2887 -2.5643 31 1 3.7394 9.5527 -1.4406 32 1 5.0016 9.5483 -3.4687 33 1 2.2594 7.5587 -0.2559 34 1 3.4640 7.7274 1.0928 35 1 4.5928 1.1840 -0.0122 36 1 5.4016 -1.4797 -0.8420 37 1 6.2387 -2.1573 1.2903 38 1 3.2114 -3.7588 0.9901 39 1 3.3724 -3.6062 -1.4326 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13308374.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:22 Heat of formation + Delta-G solvation = -126.755049 kcal Electronic energy + Delta-G solvation = -24434.275706 eV Core-core repulsion = 20453.532164 eV Total energy + Delta-G solvation = -3980.743542 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.125 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -48.92486 -43.94444 -40.72951 -39.78099 -37.92003 -37.21650 -35.76774 -34.33967 -33.33856 -30.58595 -29.42783 -27.43603 -27.02301 -25.65107 -24.18655 -22.54914 -22.03987 -21.00931 -20.58418 -18.80732 -18.56333 -18.28567 -17.57477 -17.46862 -17.26011 -16.94897 -16.52744 -16.40280 -15.96443 -15.89849 -15.81449 -15.36846 -14.97509 -14.74511 -14.36057 -14.28898 -14.23935 -14.18272 -13.96475 -13.81037 -13.42635 -13.23220 -13.18850 -12.64134 -12.39787 -12.22384 -11.91530 -11.57936 -11.37233 -11.22604 -11.09532 -10.82930 -10.49153 -10.32311 -9.72283 -5.09603 0.05039 0.67181 1.14758 1.37117 1.62755 1.92997 2.00049 2.09192 3.00624 3.07799 3.10500 3.13353 3.31827 3.49703 3.57741 3.61294 3.64399 3.80280 4.00758 4.21905 4.22208 4.33205 4.33647 4.41813 4.44246 4.49220 4.54286 4.58047 4.60800 4.65000 4.69459 4.81887 4.87387 4.95252 4.98169 5.07188 5.18517 5.35293 5.73117 6.26465 6.82416 6.88073 6.95990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C 0.079 3.921 3 C -0.267 4.267 4 C 0.593 3.407 5 O -0.567 6.567 6 N -0.713 5.713 7 C 0.115 3.885 8 C 0.078 3.922 9 F -0.199 7.199 10 C -0.142 4.142 11 C -0.112 4.112 12 H 0.085 0.915 13 C 0.084 3.916 14 O -0.599 6.599 15 C -0.133 4.133 16 C -0.143 4.143 17 C -0.035 4.035 18 C -0.038 4.038 19 O -0.561 6.561 20 Si 0.809 3.191 21 O -0.191 6.191 22 H 0.103 0.897 23 H 0.093 0.907 24 H 0.103 0.897 25 H 0.411 0.589 26 H 0.101 0.899 27 H 0.077 0.923 28 H 0.076 0.924 29 H 0.116 0.884 30 H 0.065 0.935 31 H 0.060 0.940 32 H 0.397 0.603 33 H 0.127 0.873 34 H 0.089 0.911 35 H 0.181 0.819 36 H 0.129 0.871 37 H 0.414 0.586 38 H -0.308 1.308 39 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.446 0.156 -3.203 4.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.026 3.974 3 C -0.271 4.271 4 C 0.382 3.618 5 O -0.448 6.448 6 N -0.364 5.364 7 C -0.009 4.009 8 C 0.059 3.941 9 F -0.180 7.180 10 C -0.179 4.179 11 C -0.131 4.131 12 H 0.104 0.896 13 C 0.006 3.994 14 O -0.407 6.407 15 C -0.171 4.171 16 C -0.162 4.162 17 C -0.082 4.082 18 C -0.147 4.147 19 O -0.373 6.373 20 Si 0.715 3.285 21 O -0.090 6.090 22 H 0.121 0.879 23 H 0.111 0.889 24 H 0.121 0.879 25 H 0.248 0.752 26 H 0.119 0.881 27 H 0.095 0.905 28 H 0.095 0.905 29 H 0.134 0.866 30 H 0.083 0.917 31 H 0.078 0.922 32 H 0.247 0.753 33 H 0.145 0.855 34 H 0.107 0.893 35 H 0.198 0.802 36 H 0.147 0.853 37 H 0.268 0.732 38 H -0.237 1.237 39 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges 1.704 -0.442 -2.758 3.272 hybrid contribution 0.218 0.972 -0.086 0.999 sum 1.922 0.530 -2.844 3.474 Atomic orbital electron populations 1.20739 0.82209 1.05552 1.05461 1.23355 0.94991 0.82889 0.96172 1.21241 0.94135 0.93642 1.18080 1.17194 0.85133 0.84066 0.75367 1.90753 1.17509 1.84406 1.52182 1.45562 1.10295 1.05672 1.74884 1.21923 0.95537 0.78930 1.04520 1.22195 0.86003 0.95577 0.90324 1.92846 1.63887 1.91376 1.69850 1.23740 1.02921 0.96380 0.94883 1.22473 0.99695 0.94551 0.96378 0.89617 1.22223 0.87960 0.97581 0.91610 1.86441 1.39456 1.64636 1.50211 1.23575 1.01101 0.91370 1.01006 1.22831 0.96609 0.93366 1.03374 1.21843 0.82340 0.95402 1.08614 1.24005 0.91424 1.07404 0.91916 1.86416 1.47171 1.67316 1.36355 0.94308 0.82829 0.75487 0.75912 1.83704 1.17390 1.35820 1.72050 0.87860 0.88863 0.87852 0.75227 0.88125 0.90468 0.90540 0.86580 0.91688 0.92225 0.75263 0.85453 0.89254 0.80154 0.85326 0.73238 1.23666 1.22063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.36 9.89 71.23 0.70 0.35 16 2 C 0.08 0.71 7.37 25.26 0.19 0.89 16 3 C -0.27 -2.28 6.31 -18.99 -0.12 -2.40 16 4 C 0.59 5.26 7.81 86.65 0.68 5.94 16 5 O -0.57 -7.73 14.84 -4.06 -0.06 -7.79 16 6 N -0.71 -2.36 5.45 -466.41 -2.54 -4.90 16 7 C 0.11 0.03 5.42 86.38 0.47 0.50 16 8 C 0.08 -0.10 1.74 -10.26 -0.02 -0.11 16 9 F -0.20 -0.82 16.59 44.97 0.75 -0.07 16 10 C -0.14 0.36 7.08 31.12 0.22 0.58 16 11 C -0.11 0.22 3.98 -10.27 -0.04 0.18 16 12 H 0.09 0.16 8.14 -2.39 -0.02 0.14 16 13 C 0.08 -0.32 6.89 71.98 0.50 0.18 16 14 O -0.60 -0.02 13.66 -148.98 -2.03 -2.05 16 15 C -0.13 0.59 7.10 31.12 0.22 0.82 16 16 C -0.14 -0.74 10.48 23.65 0.25 -0.49 16 17 C -0.03 -0.22 6.22 24.76 0.15 -0.06 16 18 C -0.04 0.07 2.96 71.24 0.21 0.28 16 19 O -0.56 1.18 12.86 -148.98 -1.92 -0.74 16 20 Si 0.81 -1.43 32.09 68.60 2.20 0.77 16 21 O -0.19 -1.89 8.90 4.44 0.04 -1.85 16 22 H 0.10 0.18 8.14 -2.38 -0.02 0.16 16 23 H 0.09 0.11 8.14 -2.38 -0.02 0.09 16 24 H 0.10 0.66 6.49 -2.39 -0.02 0.64 16 25 H 0.41 0.30 7.20 -92.71 -0.67 -0.37 16 26 H 0.10 -0.16 7.84 -2.38 -0.02 -0.18 16 27 H 0.08 0.13 8.14 -2.38 -0.02 0.11 16 28 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 29 H 0.12 -0.61 7.65 -2.39 -0.02 -0.63 16 30 H 0.06 -0.45 7.85 -2.39 -0.02 -0.47 16 31 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 32 H 0.40 -3.34 9.12 -74.06 -0.68 -4.01 16 33 H 0.13 -1.11 8.06 -2.39 -0.02 -1.13 16 34 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 35 H 0.18 -0.05 7.74 -2.91 -0.02 -0.07 16 36 H 0.13 -1.07 7.96 -2.39 -0.02 -1.09 16 37 H 0.41 -5.69 8.74 -74.06 -0.65 -6.33 16 38 H -0.31 -2.48 7.11 99.48 0.71 -1.77 16 39 H -0.29 -1.40 7.11 99.48 0.71 -0.69 16 Total: 0.00 -25.39 337.50 -1.00 -26.39 By element: Atomic # 1 Polarization: -15.55 SS G_CDS: -0.84 Total: -16.40 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: 3.41 Total: 6.64 kcal Atomic # 7 Polarization: -2.36 SS G_CDS: -2.54 Total: -4.90 kcal Atomic # 8 Polarization: -8.46 SS G_CDS: -3.97 Total: -12.43 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.75 Total: -0.07 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: 2.20 Total: 0.77 kcal Total: -25.39 -1.00 -26.39 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13308374.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.366 kcal (2) G-P(sol) polarization free energy of solvation -25.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.389 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds