Wall clock time and date at job start Sun Mar 7 2021 08:58:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86292 * 109.47395 * 2 1 4 4 C 1.50703 * 109.46881 * 240.00250 * 2 1 3 5 5 C 1.33743 * 125.11698 * 299.99907 * 4 2 1 6 6 C 1.37800 * 115.07927 * 179.78748 * 5 4 2 7 7 C 1.34983 * 114.70078 * 0.43120 * 6 5 4 8 8 C 1.47565 * 125.27450 * 179.85333 * 7 6 5 9 9 C 1.39818 * 119.99384 * 179.72010 * 8 7 6 10 10 C 1.36565 * 119.99749 * 179.97438 * 9 8 7 11 11 C 1.39826 * 119.99906 * 0.02562 * 10 9 8 12 12 C 1.47565 * 119.99887 * 179.97438 * 11 10 9 13 13 O 1.21592 * 120.00139 * 0.02562 * 12 11 10 14 14 N 1.34780 * 119.99485 * 179.97438 * 12 11 10 15 15 C 1.46505 * 119.99707 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.47103 * 180.02562 * 15 14 12 17 17 F 1.39900 * 112.85260 * 316.20015 * 16 15 14 18 18 C 1.53786 * 113.61123 * 87.50710 * 16 15 14 19 19 C 1.53787 * 87.07815 * 139.98040 * 18 16 15 20 20 H 1.08999 * 113.61436 * 89.11855 * 19 18 16 21 21 C 1.52995 * 113.68512 * 220.00590 * 19 18 16 22 22 O 1.42898 * 109.47181 * 272.53576 * 21 19 18 23 23 C 1.53780 * 87.08057 * 334.56445 * 19 18 16 24 24 C 1.39832 * 120.00187 * 0.02562 * 11 10 9 25 25 C 1.36564 * 119.99487 * 359.97438 * 24 11 10 26 26 S 1.75856 * 125.11926 * 120.02403 * 4 2 1 27 27 H 0.96698 * 114.00261 * 59.99295 * 1 2 3 28 28 H 1.09003 * 109.47705 * 120.00519 * 2 1 3 29 29 H 1.48496 * 110.00196 * 298.68704 * 3 2 1 30 30 H 1.48503 * 109.99760 * 60.00335 * 3 2 1 31 31 H 1.07999 * 122.46362 * 0.04265 * 5 4 2 32 32 H 1.08006 * 122.65223 * 180.26004 * 6 5 4 33 33 H 1.08000 * 120.00627 * 0.02562 * 9 8 7 34 34 H 1.08004 * 119.99588 * 179.75299 * 10 9 8 35 35 H 0.96998 * 120.00626 * 0.02562 * 14 12 11 36 36 H 1.08993 * 109.47419 * 300.00734 * 15 14 12 37 37 H 1.09003 * 109.46610 * 60.00279 * 15 14 12 38 38 H 1.08998 * 113.61215 * 254.52872 * 18 16 15 39 39 H 1.08994 * 113.61377 * 25.43044 * 18 16 15 40 40 H 1.08996 * 109.47528 * 32.53798 * 21 19 18 41 41 H 1.09007 * 109.46683 * 152.53856 * 21 19 18 42 42 H 0.96706 * 113.99871 * 180.02562 * 22 21 19 43 43 H 1.08998 * 113.61979 * 270.88232 * 23 19 18 44 44 H 1.09005 * 113.68845 * 139.99471 * 23 19 18 45 45 H 1.08000 * 120.00454 * 180.02562 * 24 11 10 46 46 H 1.07996 * 120.00178 * 179.97438 * 25 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6720 -1.9847 -1.5429 6 6 2.2337 -2.4228 -2.7225 7 6 2.9676 -1.4972 -3.3758 8 6 3.6726 -1.7154 -4.6536 9 6 4.3989 -0.6733 -5.2379 10 6 5.0519 -0.8752 -6.4203 11 6 4.9937 -2.1240 -7.0466 12 6 5.6988 -2.3420 -8.3245 13 8 6.3308 -1.4359 -8.8324 14 7 5.6430 -3.5459 -8.9279 15 6 6.3425 -3.7622 -10.1969 16 6 6.1190 -5.2021 -10.6634 17 9 6.2491 -6.1348 -9.6289 18 6 4.8449 -5.3862 -11.5047 19 6 5.6639 -6.3372 -12.3935 20 1 5.6396 -7.3749 -12.0610 21 6 5.3728 -6.1852 -13.8878 22 8 4.2704 -7.0210 -14.2458 23 6 6.9127 -5.5701 -11.9281 24 6 4.2664 -3.1658 -6.4628 25 6 3.6135 -2.9638 -5.2805 26 16 2.9471 0.0113 -2.4715 27 1 -0.3933 0.4418 -0.7650 28 1 1.7925 -0.5139 0.8899 29 1 1.5879 2.4585 -1.2241 30 1 1.5616 2.4677 1.2086 31 1 1.0635 -2.6223 -0.9188 32 1 2.0997 -3.4282 -3.0936 33 1 4.4443 0.2911 -4.7540 34 1 5.6096 -0.0691 -6.8736 35 1 5.1391 -4.2688 -8.5225 36 1 5.9553 -3.0732 -10.9474 37 1 7.4093 -3.5863 -10.0582 38 1 4.0347 -5.8796 -10.9679 39 1 4.5243 -4.4785 -12.0159 40 1 5.1267 -5.1461 -14.1063 41 1 6.2524 -6.4785 -14.4610 42 1 4.0299 -6.9756 -15.1814 43 1 7.1575 -4.7126 -12.5550 44 1 7.7728 -6.2108 -11.7328 45 1 4.2217 -4.1305 -6.9464 46 1 3.0514 -3.7683 -4.8297 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13308390.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:26 Heat of formation + Delta-G solvation = -77.284391 kcal Electronic energy + Delta-G solvation = -30255.708183 eV Core-core repulsion = 25732.738347 eV Total energy + Delta-G solvation = -4522.969835 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.113 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -48.91292 -41.34145 -40.15880 -39.72958 -39.04326 -37.50736 -37.28479 -35.69509 -33.60151 -32.36850 -30.89156 -30.02159 -27.75436 -27.20749 -26.68485 -24.66918 -23.95319 -23.41786 -22.33114 -21.67606 -20.79894 -20.31993 -19.41174 -18.70700 -18.40061 -17.79865 -17.43162 -17.00782 -16.88572 -16.63100 -16.50221 -16.33666 -16.20775 -16.06672 -15.97568 -15.52398 -15.39880 -15.05156 -14.90068 -14.60999 -14.51513 -14.24262 -14.22484 -13.85415 -13.81381 -13.65196 -13.60364 -13.35433 -13.23495 -13.12421 -12.56623 -12.49044 -12.35697 -12.13840 -12.01965 -11.63085 -11.55118 -11.45550 -11.03466 -10.94578 -10.88333 -10.66136 -10.23093 -10.22287 -9.58311 -9.05765 -5.12594 -0.91001 0.23527 0.30618 0.35533 0.72276 1.16226 1.51287 1.55009 1.84824 1.94206 1.98438 2.82114 2.86947 2.97131 3.03206 3.20305 3.21649 3.37077 3.40298 3.59791 3.62302 3.67051 3.71790 3.78050 4.11481 4.14002 4.19179 4.25361 4.31205 4.33142 4.38697 4.41051 4.44259 4.47286 4.51087 4.52422 4.58118 4.69294 4.77854 4.82318 4.85794 4.95297 5.06165 5.16293 5.20471 5.24196 5.26991 5.28069 5.42834 5.69141 6.24984 6.34532 6.57102 7.11068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.033 4.033 3 Si 0.649 3.351 4 C -0.217 4.217 5 C -0.104 4.104 6 C -0.119 4.119 7 C -0.148 4.148 8 C 0.014 3.986 9 C -0.120 4.120 10 C -0.048 4.048 11 C -0.137 4.137 12 C 0.561 3.439 13 O -0.533 6.533 14 N -0.725 5.725 15 C 0.113 3.887 16 C 0.080 3.920 17 F -0.184 7.184 18 C -0.146 4.146 19 C -0.109 4.109 20 H 0.105 0.895 21 C 0.085 3.915 22 O -0.573 6.573 23 C -0.142 4.142 24 C -0.077 4.077 25 C -0.109 4.109 26 S 0.134 5.866 27 H 0.378 0.622 28 H 0.128 0.872 29 H -0.240 1.240 30 H -0.234 1.234 31 H 0.146 0.854 32 H 0.145 0.855 33 H 0.131 0.869 34 H 0.142 0.858 35 H 0.404 0.596 36 H 0.091 0.909 37 H 0.083 0.917 38 H 0.085 0.915 39 H 0.103 0.897 40 H 0.050 0.950 41 H 0.051 0.949 42 H 0.382 0.618 43 H 0.106 0.894 44 H 0.090 0.910 45 H 0.130 0.870 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.450 -1.300 -2.083 2.497 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.145 4.145 3 Si 0.547 3.453 4 C -0.335 4.335 5 C -0.134 4.134 6 C -0.150 4.150 7 C -0.265 4.265 8 C 0.012 3.988 9 C -0.139 4.139 10 C -0.067 4.067 11 C -0.140 4.140 12 C 0.349 3.651 13 O -0.410 6.410 14 N -0.378 5.378 15 C -0.011 4.011 16 C 0.061 3.939 17 F -0.164 7.164 18 C -0.184 4.184 19 C -0.127 4.127 20 H 0.123 0.877 21 C 0.008 3.992 22 O -0.379 6.379 23 C -0.180 4.180 24 C -0.096 4.096 25 C -0.129 4.129 26 S 0.401 5.599 27 H 0.226 0.774 28 H 0.146 0.854 29 H -0.164 1.164 30 H -0.157 1.157 31 H 0.164 0.836 32 H 0.163 0.837 33 H 0.149 0.851 34 H 0.160 0.840 35 H 0.241 0.759 36 H 0.109 0.891 37 H 0.102 0.898 38 H 0.104 0.896 39 H 0.121 0.879 40 H 0.068 0.932 41 H 0.069 0.931 42 H 0.230 0.770 43 H 0.124 0.876 44 H 0.109 0.891 45 H 0.148 0.852 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.446 1.189 -1.421 2.350 hybrid contribution -1.857 -2.011 -0.621 2.807 sum -0.411 -0.823 -2.043 2.240 Atomic orbital electron populations 1.86628 1.17177 1.79907 1.49283 1.24376 0.83834 1.10053 0.96255 0.95216 0.91863 0.75172 0.83035 1.25040 1.07110 0.99048 1.02282 1.20004 1.01202 0.94854 0.97354 1.20400 0.98631 1.00581 0.95339 1.23090 1.05909 0.98038 0.99478 1.18300 0.95229 0.94087 0.91214 1.20974 0.98019 0.98738 0.96180 1.20939 0.95961 0.96210 0.93573 1.19959 1.02198 0.95661 0.96186 1.18199 0.80399 0.82099 0.84360 1.90814 1.42283 1.42275 1.65668 1.45740 1.54044 1.13872 1.24148 1.21834 0.98952 0.93866 0.86413 1.22086 1.00020 0.86460 0.85360 1.92874 1.96668 1.66889 1.59977 1.23732 0.96347 1.00987 0.97300 1.22513 0.95522 1.00487 0.94199 0.87669 1.22139 0.89012 0.93592 0.94501 1.86488 1.51883 1.67918 1.31620 1.23559 0.97901 1.01665 0.94885 1.20980 0.95246 0.98144 0.95215 1.20873 1.00239 0.96385 0.95422 1.84160 1.48627 1.12442 1.14636 0.77402 0.85428 1.16395 1.15708 0.83649 0.83739 0.85100 0.84020 0.75934 0.89079 0.89836 0.89634 0.87902 0.93194 0.93115 0.77048 0.87559 0.89116 0.85206 0.84764 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.35 12.86 -35.23 -0.45 -0.81 16 2 C -0.03 0.02 2.96 36.01 0.11 0.13 16 3 Si 0.65 -0.59 30.96 -169.99 -5.26 -5.85 16 4 C -0.22 0.02 5.73 -35.88 -0.21 -0.18 16 5 C -0.10 0.00 10.00 -41.32 -0.41 -0.41 16 6 C -0.12 0.03 9.64 -40.90 -0.39 -0.37 16 7 C -0.15 -0.06 6.37 -36.94 -0.24 -0.30 16 8 C 0.01 0.01 5.88 -104.91 -0.62 -0.61 16 9 C -0.12 -0.07 9.54 -39.59 -0.38 -0.45 16 10 C -0.05 -0.06 9.53 -39.59 -0.38 -0.44 16 11 C -0.14 -0.17 5.88 -104.90 -0.62 -0.79 16 12 C 0.56 1.40 7.76 -12.45 -0.10 1.31 16 13 O -0.53 -3.13 16.33 5.28 0.09 -3.04 16 14 N -0.72 -0.02 5.40 -61.34 -0.33 -0.36 16 15 C 0.11 -0.08 5.42 -4.04 -0.02 -0.10 16 16 C 0.08 -0.11 1.74 -89.81 -0.16 -0.27 16 17 F -0.18 -0.14 16.58 2.25 0.04 -0.11 16 18 C -0.15 0.26 7.08 -25.91 -0.18 0.07 16 19 C -0.11 0.15 3.99 -89.81 -0.36 -0.21 16 20 H 0.11 0.00 8.14 -51.93 -0.42 -0.42 16 21 C 0.09 -0.16 6.89 37.16 0.26 0.10 16 22 O -0.57 0.06 13.66 -35.23 -0.48 -0.42 16 23 C -0.14 0.35 7.10 -25.92 -0.18 0.17 16 24 C -0.08 0.05 9.48 -39.59 -0.38 -0.32 16 25 C -0.11 0.07 9.48 -39.59 -0.38 -0.31 16 26 S 0.13 -0.02 19.46 -107.50 -2.09 -2.11 16 27 H 0.38 -0.77 8.70 45.56 0.40 -0.37 16 28 H 0.13 -0.19 7.96 -51.93 -0.41 -0.61 16 29 H -0.24 -0.22 7.11 56.52 0.40 0.18 16 30 H -0.23 -0.41 7.11 56.52 0.40 0.00 16 31 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 32 H 0.15 -0.30 6.88 -52.48 -0.36 -0.66 16 33 H 0.13 -0.09 7.26 -52.49 -0.38 -0.47 16 34 H 0.14 0.18 7.64 -52.48 -0.40 -0.23 16 35 H 0.40 -0.67 6.04 -40.82 -0.25 -0.92 16 36 H 0.09 -0.11 7.84 -51.93 -0.41 -0.51 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.10 -0.27 7.65 -51.93 -0.40 -0.67 16 40 H 0.05 -0.15 7.85 -51.93 -0.41 -0.56 16 41 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 43 H 0.11 -0.43 8.06 -51.93 -0.42 -0.85 16 44 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 45 H 0.13 -0.40 6.38 -52.49 -0.34 -0.74 16 46 H 0.13 -0.36 6.74 -52.49 -0.35 -0.71 16 LS Contribution 400.81 15.07 6.04 6.04 Total: 0.00 -8.93 400.81 -12.13 -21.05 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -5.04 Total: -11.43 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -4.63 Total: -2.97 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: -0.33 Total: -0.36 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.85 Total: -4.27 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.04 Total: -0.11 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.26 Total: -5.85 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.09 Total: -2.11 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -8.93 -12.13 -21.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13308390.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.230 kcal (2) G-P(sol) polarization free energy of solvation -8.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.054 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds