Wall clock time and date at job start Sun Mar 7 2021 08:58:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86292 * 109.47395 * 2 1 4 4 C 1.50703 * 109.46881 * 240.00250 * 2 1 3 5 5 C 1.33743 * 125.11698 * 299.99907 * 4 2 1 6 6 C 1.37800 * 115.07927 * 179.78748 * 5 4 2 7 7 C 1.34983 * 114.70078 * 0.43120 * 6 5 4 8 8 C 1.47565 * 125.27450 * 179.85333 * 7 6 5 9 9 C 1.39818 * 119.99384 * 179.72010 * 8 7 6 10 10 C 1.36565 * 119.99749 * 179.97438 * 9 8 7 11 11 C 1.39826 * 119.99906 * 0.02562 * 10 9 8 12 12 C 1.47565 * 119.99887 * 179.97438 * 11 10 9 13 13 O 1.21592 * 120.00139 * 0.02562 * 12 11 10 14 14 N 1.34780 * 119.99485 * 179.97438 * 12 11 10 15 15 C 1.46505 * 119.99707 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.47103 * 180.02562 * 15 14 12 17 17 F 1.39900 * 112.85260 * 316.20015 * 16 15 14 18 18 C 1.53786 * 113.61123 * 87.50710 * 16 15 14 19 19 C 1.53787 * 87.07815 * 139.98040 * 18 16 15 20 20 H 1.08999 * 113.61436 * 89.11855 * 19 18 16 21 21 C 1.52995 * 113.68512 * 220.00590 * 19 18 16 22 22 O 1.42898 * 109.47181 * 272.53576 * 21 19 18 23 23 C 1.53780 * 87.08057 * 334.56445 * 19 18 16 24 24 C 1.39832 * 120.00187 * 0.02562 * 11 10 9 25 25 C 1.36564 * 119.99487 * 359.97438 * 24 11 10 26 26 S 1.75856 * 125.11926 * 120.02403 * 4 2 1 27 27 H 0.96698 * 114.00261 * 59.99295 * 1 2 3 28 28 H 1.09003 * 109.47705 * 120.00519 * 2 1 3 29 29 H 1.48496 * 110.00196 * 298.68704 * 3 2 1 30 30 H 1.48503 * 109.99760 * 60.00335 * 3 2 1 31 31 H 1.07999 * 122.46362 * 0.04265 * 5 4 2 32 32 H 1.08006 * 122.65223 * 180.26004 * 6 5 4 33 33 H 1.08000 * 120.00627 * 0.02562 * 9 8 7 34 34 H 1.08004 * 119.99588 * 179.75299 * 10 9 8 35 35 H 0.96998 * 120.00626 * 0.02562 * 14 12 11 36 36 H 1.08993 * 109.47419 * 300.00734 * 15 14 12 37 37 H 1.09003 * 109.46610 * 60.00279 * 15 14 12 38 38 H 1.08998 * 113.61215 * 254.52872 * 18 16 15 39 39 H 1.08994 * 113.61377 * 25.43044 * 18 16 15 40 40 H 1.08996 * 109.47528 * 32.53798 * 21 19 18 41 41 H 1.09007 * 109.46683 * 152.53856 * 21 19 18 42 42 H 0.96706 * 113.99871 * 180.02562 * 22 21 19 43 43 H 1.08998 * 113.61979 * 270.88232 * 23 19 18 44 44 H 1.09005 * 113.68845 * 139.99471 * 23 19 18 45 45 H 1.08000 * 120.00454 * 180.02562 * 24 11 10 46 46 H 1.07996 * 120.00178 * 179.97438 * 25 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6720 -1.9847 -1.5429 6 6 2.2337 -2.4228 -2.7225 7 6 2.9676 -1.4972 -3.3758 8 6 3.6726 -1.7154 -4.6536 9 6 4.3989 -0.6733 -5.2379 10 6 5.0519 -0.8752 -6.4203 11 6 4.9937 -2.1240 -7.0466 12 6 5.6988 -2.3420 -8.3245 13 8 6.3308 -1.4359 -8.8324 14 7 5.6430 -3.5459 -8.9279 15 6 6.3425 -3.7622 -10.1969 16 6 6.1190 -5.2021 -10.6634 17 9 6.2491 -6.1348 -9.6289 18 6 4.8449 -5.3862 -11.5047 19 6 5.6639 -6.3372 -12.3935 20 1 5.6396 -7.3749 -12.0610 21 6 5.3728 -6.1852 -13.8878 22 8 4.2704 -7.0210 -14.2458 23 6 6.9127 -5.5701 -11.9281 24 6 4.2664 -3.1658 -6.4628 25 6 3.6135 -2.9638 -5.2805 26 16 2.9471 0.0113 -2.4715 27 1 -0.3933 0.4418 -0.7650 28 1 1.7925 -0.5139 0.8899 29 1 1.5879 2.4585 -1.2241 30 1 1.5616 2.4677 1.2086 31 1 1.0635 -2.6223 -0.9188 32 1 2.0997 -3.4282 -3.0936 33 1 4.4443 0.2911 -4.7540 34 1 5.6096 -0.0691 -6.8736 35 1 5.1391 -4.2688 -8.5225 36 1 5.9553 -3.0732 -10.9474 37 1 7.4093 -3.5863 -10.0582 38 1 4.0347 -5.8796 -10.9679 39 1 4.5243 -4.4785 -12.0159 40 1 5.1267 -5.1461 -14.1063 41 1 6.2524 -6.4785 -14.4610 42 1 4.0299 -6.9756 -15.1814 43 1 7.1575 -4.7126 -12.5550 44 1 7.7728 -6.2108 -11.7328 45 1 4.2217 -4.1305 -6.9464 46 1 3.0514 -3.7683 -4.8297 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13308390.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:25 Heat of formation + Delta-G solvation = -76.369409 kcal Electronic energy + Delta-G solvation = -30255.668506 eV Core-core repulsion = 25732.738347 eV Total energy + Delta-G solvation = -4522.930159 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.113 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -48.89702 -41.41516 -40.09775 -39.69627 -39.04375 -37.49203 -37.19798 -35.78599 -33.59898 -32.34804 -30.87360 -29.96645 -27.69651 -27.05153 -26.61960 -24.64007 -23.94221 -23.39087 -22.24985 -21.74107 -20.68223 -20.28997 -19.41321 -18.70624 -18.28044 -17.80078 -17.41496 -16.98844 -16.86001 -16.57341 -16.46560 -16.30794 -16.18749 -16.08847 -15.96906 -15.53539 -15.34744 -15.00682 -14.88060 -14.57801 -14.47395 -14.28678 -14.21710 -13.81891 -13.79051 -13.63275 -13.43014 -13.28390 -13.20210 -13.10549 -12.55668 -12.42328 -12.37782 -12.10182 -11.89784 -11.55878 -11.52972 -11.34761 -11.14247 -10.88704 -10.81633 -10.66936 -10.29278 -10.20859 -9.55144 -9.04490 -5.08591 -0.90949 0.23367 0.31968 0.38579 0.75899 1.20080 1.52279 1.53808 1.84447 1.91630 1.93325 2.80322 3.02570 3.10332 3.13618 3.30150 3.33558 3.40504 3.52157 3.64575 3.69285 3.73182 3.81983 3.83035 4.18033 4.24245 4.29593 4.35261 4.40527 4.44062 4.51297 4.52626 4.56211 4.59816 4.61778 4.63486 4.71207 4.83856 4.90011 4.90622 4.97602 5.00510 5.09281 5.17284 5.21641 5.27505 5.30606 5.37493 5.47288 5.71009 6.30699 6.37131 6.88281 7.00447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.034 4.034 3 Si 0.710 3.290 4 C -0.218 4.218 5 C -0.111 4.111 6 C -0.117 4.117 7 C -0.161 4.161 8 C 0.008 3.992 9 C -0.127 4.127 10 C -0.060 4.060 11 C -0.152 4.152 12 C 0.560 3.440 13 O -0.575 6.575 14 N -0.714 5.714 15 C 0.113 3.887 16 C 0.080 3.920 17 F -0.197 7.197 18 C -0.142 4.142 19 C -0.114 4.114 20 H 0.086 0.914 21 C 0.083 3.917 22 O -0.599 6.599 23 C -0.134 4.134 24 C -0.070 4.070 25 C -0.109 4.109 26 S 0.127 5.873 27 H 0.388 0.612 28 H 0.140 0.860 29 H -0.266 1.266 30 H -0.272 1.272 31 H 0.154 0.846 32 H 0.165 0.835 33 H 0.137 0.863 34 H 0.133 0.867 35 H 0.413 0.587 36 H 0.098 0.902 37 H 0.077 0.923 38 H 0.078 0.922 39 H 0.115 0.885 40 H 0.064 0.936 41 H 0.059 0.941 42 H 0.397 0.603 43 H 0.126 0.874 44 H 0.089 0.911 45 H 0.155 0.845 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.022 -2.385 -2.234 3.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.146 4.146 3 Si 0.612 3.388 4 C -0.336 4.336 5 C -0.141 4.141 6 C -0.147 4.147 7 C -0.278 4.278 8 C 0.006 3.994 9 C -0.146 4.146 10 C -0.079 4.079 11 C -0.155 4.155 12 C 0.349 3.651 13 O -0.456 6.456 14 N -0.367 5.367 15 C -0.011 4.011 16 C 0.061 3.939 17 F -0.178 7.178 18 C -0.180 4.180 19 C -0.132 4.132 20 H 0.105 0.895 21 C 0.006 3.994 22 O -0.408 6.408 23 C -0.172 4.172 24 C -0.088 4.088 25 C -0.129 4.129 26 S 0.394 5.606 27 H 0.237 0.763 28 H 0.157 0.843 29 H -0.191 1.191 30 H -0.197 1.197 31 H 0.172 0.828 32 H 0.182 0.818 33 H 0.155 0.845 34 H 0.151 0.849 35 H 0.251 0.749 36 H 0.116 0.884 37 H 0.095 0.905 38 H 0.097 0.903 39 H 0.133 0.867 40 H 0.083 0.917 41 H 0.077 0.923 42 H 0.247 0.753 43 H 0.144 0.856 44 H 0.108 0.892 45 H 0.172 0.828 46 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.014 0.064 -1.594 1.890 hybrid contribution -1.776 -1.676 -0.557 2.505 sum -0.762 -1.612 -2.151 2.794 Atomic orbital electron populations 1.86599 1.17811 1.80199 1.50131 1.24470 0.83367 1.10147 0.96647 0.94460 0.91012 0.73809 0.79510 1.25110 1.07028 0.99198 1.02243 1.20180 1.01334 0.94944 0.97631 1.20640 0.97775 1.01315 0.94976 1.23171 1.06605 0.98301 0.99712 1.18459 0.95058 0.94520 0.91347 1.21054 0.98182 0.99340 0.96034 1.20957 0.96495 0.96381 0.94105 1.19989 1.03149 0.96327 0.96053 1.18428 0.79927 0.82151 0.84635 1.90784 1.44308 1.43659 1.66859 1.45701 1.53445 1.13364 1.24181 1.21906 0.98544 0.94457 0.86228 1.22153 1.00845 0.85612 0.85288 1.92845 1.96786 1.67394 1.60734 1.23744 0.95837 1.01329 0.97040 1.22489 0.96323 0.99610 0.94826 0.89533 1.22231 0.88962 0.94184 0.94059 1.86441 1.52530 1.68538 1.33244 1.23578 0.97299 1.02110 0.94207 1.21219 0.94065 0.98501 0.95063 1.21170 0.99983 0.96542 0.95206 1.84179 1.48806 1.12733 1.14869 0.76276 0.84296 1.19140 1.19704 0.82840 0.81789 0.84530 0.84903 0.74893 0.88362 0.90514 0.90313 0.86669 0.91733 0.92301 0.75296 0.85617 0.89232 0.82768 0.82369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.58 12.86 -148.98 -1.92 -2.50 16 2 C -0.03 0.05 2.96 71.24 0.21 0.26 16 3 Si 0.71 -0.94 30.96 68.60 2.12 1.18 16 4 C -0.22 0.16 5.73 24.67 0.14 0.30 16 5 C -0.11 0.12 10.00 21.14 0.21 0.34 16 6 C -0.12 0.21 9.64 21.42 0.21 0.41 16 7 C -0.16 -0.05 6.37 23.98 0.15 0.10 16 8 C 0.01 0.01 5.88 -20.05 -0.12 -0.11 16 9 C -0.13 -0.24 9.54 22.26 0.21 -0.03 16 10 C -0.06 -0.24 9.53 22.26 0.21 -0.03 16 11 C -0.15 -0.47 5.88 -20.05 -0.12 -0.58 16 12 C 0.56 3.28 7.76 86.70 0.67 3.96 16 13 O -0.58 -7.71 16.33 -4.01 -0.07 -7.78 16 14 N -0.71 -0.12 5.40 -466.23 -2.52 -2.64 16 15 C 0.11 -0.16 5.42 86.38 0.47 0.31 16 16 C 0.08 -0.23 1.74 -10.27 -0.02 -0.25 16 17 F -0.20 -0.32 16.58 44.97 0.75 0.42 16 18 C -0.14 0.55 7.08 31.12 0.22 0.77 16 19 C -0.11 0.33 3.99 -10.27 -0.04 0.29 16 20 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 21 C 0.08 -0.36 6.89 71.98 0.50 0.13 16 22 O -0.60 0.26 13.66 -148.98 -2.03 -1.78 16 23 C -0.13 0.74 7.10 31.12 0.22 0.96 16 24 C -0.07 0.15 9.48 22.26 0.21 0.37 16 25 C -0.11 0.27 9.48 22.26 0.21 0.48 16 26 S 0.13 -0.03 19.46 -56.49 -1.10 -1.13 16 27 H 0.39 -1.59 8.70 -74.06 -0.64 -2.23 16 28 H 0.14 -0.54 7.96 -2.39 -0.02 -0.55 16 29 H -0.27 -0.73 7.11 99.48 0.71 -0.03 16 30 H -0.27 -1.30 7.11 99.48 0.71 -0.59 16 31 H 0.15 -0.45 8.06 -2.91 -0.02 -0.48 16 32 H 0.16 -1.05 6.88 -2.91 -0.02 -1.07 16 33 H 0.14 -0.04 7.26 -2.91 -0.02 -0.06 16 34 H 0.13 0.66 7.64 -2.91 -0.02 0.64 16 35 H 0.41 -1.56 6.04 -92.71 -0.56 -2.12 16 36 H 0.10 -0.25 7.84 -2.39 -0.02 -0.27 16 37 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 38 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 39 H 0.12 -0.73 7.65 -2.39 -0.02 -0.75 16 40 H 0.06 -0.47 7.85 -2.39 -0.02 -0.49 16 41 H 0.06 -0.36 8.14 -2.38 -0.02 -0.38 16 42 H 0.40 -3.46 9.12 -74.05 -0.68 -4.13 16 43 H 0.13 -1.18 8.06 -2.39 -0.02 -1.20 16 44 H 0.09 -0.44 8.14 -2.38 -0.02 -0.46 16 45 H 0.15 -1.21 6.38 -2.91 -0.02 -1.23 16 46 H 0.16 -1.22 6.74 -2.91 -0.02 -1.24 16 Total: 0.00 -21.36 400.81 -1.99 -23.35 By element: Atomic # 1 Polarization: -16.03 SS G_CDS: -0.78 Total: -16.81 kcal Atomic # 6 Polarization: 4.13 SS G_CDS: 3.55 Total: 7.68 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -2.52 Total: -2.64 kcal Atomic # 8 Polarization: -8.04 SS G_CDS: -4.02 Total: -12.05 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.75 Total: 0.42 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: 2.12 Total: 1.18 kcal Atomic # 16 Polarization: -0.03 SS G_CDS: -1.10 Total: -1.13 kcal Total: -21.36 -1.99 -23.35 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13308390.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.020 kcal (2) G-P(sol) polarization free energy of solvation -21.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.991 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.350 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds