Wall clock time and date at job start Sun Mar 7 2021 08:58:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.46931 * 2 1 4 4 C 1.50699 * 109.47087 * 119.99932 * 2 1 3 5 5 C 1.38502 * 119.80849 * 245.02280 * 4 2 1 6 6 C 1.37825 * 120.30302 * 179.71944 * 5 4 2 7 7 C 1.39662 * 119.90683 * 0.51482 * 6 5 4 8 8 C 1.47541 * 120.19316 * 179.76987 * 7 6 5 9 9 O 1.21590 * 119.99972 * 179.71962 * 8 7 6 10 10 N 1.34777 * 119.99951 * 359.71115 * 8 7 6 11 11 C 1.46502 * 120.00161 * 180.02562 * 10 8 7 12 12 C 1.52994 * 109.47057 * 180.02562 * 11 10 8 13 13 F 1.39901 * 112.90952 * 316.25170 * 12 11 10 14 14 C 1.53779 * 113.61529 * 87.50494 * 12 11 10 15 15 C 1.53779 * 87.08402 * 139.98073 * 14 12 11 16 16 H 1.09000 * 113.61527 * 89.11480 * 15 14 12 17 17 C 1.53000 * 113.61731 * 220.02348 * 15 14 12 18 18 O 1.42904 * 109.46797 * 272.49576 * 17 15 14 19 19 C 1.53784 * 113.61233 * 185.00081 * 12 11 10 20 20 C 1.40177 * 119.61943 * 359.48709 * 7 6 5 21 21 O 1.35650 * 120.15148 * 180.23475 * 20 7 6 22 22 C 1.38097 * 119.80316 * 64.99934 * 4 2 1 23 23 H 0.96700 * 113.99760 * 59.99409 * 1 2 3 24 24 H 1.08997 * 109.47041 * 240.00294 * 2 1 3 25 25 H 1.48501 * 110.00193 * 60.00440 * 3 2 1 26 26 H 1.48507 * 109.99486 * 181.31853 * 3 2 1 27 27 H 1.08003 * 119.84681 * 359.97438 * 5 4 2 28 28 H 1.08007 * 120.04897 * 180.25066 * 6 5 4 29 29 H 0.97005 * 119.99592 * 0.02562 * 10 8 7 30 30 H 1.08994 * 109.46583 * 60.00367 * 11 10 8 31 31 H 1.09001 * 109.46856 * 300.00825 * 11 10 8 32 32 H 1.09006 * 113.61307 * 25.43275 * 14 12 11 33 33 H 1.09007 * 113.61642 * 254.53032 * 14 12 11 34 34 H 1.09003 * 109.47303 * 32.48927 * 17 15 14 35 35 H 1.08993 * 109.47406 * 152.49206 * 17 15 14 36 36 H 0.96703 * 114.00131 * 179.97438 * 18 17 15 37 37 H 1.09004 * 113.61451 * 105.47254 * 19 12 11 38 38 H 1.08994 * 113.61477 * 334.56556 * 19 12 11 39 39 H 0.96703 * 113.99991 * 90.00301 * 21 20 7 40 40 H 1.08001 * 119.95981 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6393 -0.0069 2.1908 6 6 3.0984 -0.6452 3.3228 7 6 2.8587 -2.0098 3.4985 8 6 3.3517 -2.7005 4.7054 9 8 3.1366 -3.8875 4.8572 10 7 4.0407 -2.0156 5.6396 11 6 4.5308 -2.7015 6.8379 12 6 5.2736 -1.7038 7.7286 13 9 6.1293 -0.8630 7.0087 14 6 4.3582 -0.9553 8.7118 15 6 5.4782 -1.1147 9.7535 16 1 6.2007 -0.2987 9.7462 17 6 4.9670 -1.4451 11.1573 18 8 4.6776 -0.2328 11.8563 19 6 5.9348 -2.3491 8.9580 20 6 2.1418 -2.7183 2.5243 21 8 1.8987 -4.0430 2.6862 22 6 1.6827 -2.0589 1.3941 23 1 -0.3933 0.4418 -0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 1.5616 2.4679 1.2085 26 1 3.5347 1.7702 -0.0321 27 1 2.8288 1.0475 2.0539 28 1 3.6466 -0.0917 4.0710 29 1 4.2121 -1.0685 5.5186 30 1 5.2088 -3.5032 6.5457 31 1 3.6876 -3.1207 7.3869 32 1 3.4481 -1.5004 8.9623 33 1 4.1685 0.0804 8.4297 34 1 4.0608 -2.0462 11.0819 35 1 5.7297 -2.0040 11.6995 36 1 4.3478 -0.3663 12.7555 37 1 7.0180 -2.4386 8.8747 38 1 5.4557 -3.2751 9.2758 39 1 1.0732 -4.2375 3.1508 40 1 1.1300 -2.6007 0.6408 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13422076.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:29 Heat of formation + Delta-G solvation = -145.888906 kcal Electronic energy + Delta-G solvation = -25709.447634 eV Core-core repulsion = 21599.648245 eV Total energy + Delta-G solvation = -4109.799389 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.125 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -48.91373 -41.61011 -40.21654 -39.63096 -38.36862 -37.28187 -37.23052 -35.55405 -33.10932 -31.15675 -30.33741 -27.96005 -27.21728 -26.65546 -23.94466 -23.38129 -22.31778 -21.59889 -20.80134 -19.47382 -18.75261 -18.54025 -18.40081 -17.75774 -17.20781 -17.02048 -16.73141 -16.47531 -16.35561 -16.09129 -15.94554 -15.59354 -15.39581 -15.22158 -15.01937 -14.49572 -14.28281 -14.16913 -14.01625 -13.83307 -13.60089 -13.37407 -13.26301 -12.93569 -12.52501 -12.47616 -12.11980 -12.02147 -11.77773 -11.61267 -11.45405 -10.99405 -10.80666 -10.50013 -10.25145 -10.05936 -9.81305 -5.06715 -0.43258 0.07801 1.14724 1.53920 1.73503 1.85766 1.93441 2.52677 2.86591 2.96898 3.02738 3.09837 3.18870 3.21460 3.37704 3.53910 3.61835 3.67048 3.69164 3.99788 4.11445 4.16727 4.18975 4.19529 4.31105 4.38522 4.40789 4.48231 4.52108 4.55163 4.67244 4.69112 4.77530 4.82324 4.91638 5.07944 5.17707 5.18144 5.28691 5.49013 6.35120 6.48447 6.57033 6.69007 7.14605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.030 4.030 5 C -0.142 4.142 6 C -0.062 4.062 7 C -0.165 4.165 8 C 0.562 3.438 9 O -0.516 6.516 10 N -0.727 5.727 11 C 0.115 3.885 12 C 0.079 3.921 13 F -0.184 7.184 14 C -0.146 4.146 15 C -0.108 4.108 16 H 0.105 0.895 17 C 0.085 3.915 18 O -0.573 6.573 19 C -0.142 4.142 20 C 0.176 3.824 21 O -0.475 6.475 22 C -0.126 4.126 23 H 0.385 0.615 24 H 0.080 0.920 25 H -0.248 1.248 26 H -0.252 1.252 27 H 0.128 0.872 28 H 0.134 0.866 29 H 0.403 0.597 30 H 0.083 0.917 31 H 0.091 0.909 32 H 0.102 0.898 33 H 0.085 0.915 34 H 0.050 0.950 35 H 0.051 0.949 36 H 0.382 0.618 37 H 0.090 0.910 38 H 0.106 0.894 39 H 0.399 0.601 40 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.891 2.936 -0.222 3.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.189 4.189 3 Si 0.588 3.412 4 C -0.030 4.030 5 C -0.159 4.159 6 C -0.081 4.081 7 C -0.169 4.169 8 C 0.349 3.651 9 O -0.392 6.392 10 N -0.381 5.381 11 C -0.009 4.009 12 C 0.060 3.940 13 F -0.164 7.164 14 C -0.184 4.184 15 C -0.127 4.127 16 H 0.123 0.877 17 C 0.008 3.992 18 O -0.379 6.379 19 C -0.180 4.180 20 C 0.129 3.871 21 O -0.286 6.286 22 C -0.144 4.144 23 H 0.233 0.767 24 H 0.098 0.902 25 H -0.173 1.173 26 H -0.177 1.177 27 H 0.145 0.855 28 H 0.152 0.848 29 H 0.239 0.761 30 H 0.101 0.899 31 H 0.109 0.891 32 H 0.121 0.879 33 H 0.103 0.897 34 H 0.068 0.932 35 H 0.069 0.931 36 H 0.230 0.770 37 H 0.109 0.891 38 H 0.125 0.875 39 H 0.257 0.743 40 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.714 2.540 0.015 2.638 hybrid contribution -0.290 -0.220 0.805 0.884 sum -1.004 2.320 0.820 2.658 Atomic orbital electron populations 1.86483 1.16766 1.81927 1.49882 1.24779 0.86109 1.10805 0.97198 0.95118 0.80928 0.77725 0.87476 1.19428 0.95705 0.93503 0.94405 1.20827 1.00976 0.99549 0.94589 1.21107 0.97200 0.92710 0.97063 1.20354 1.05837 0.94223 0.96453 1.17990 0.78175 0.86575 0.82336 1.90837 1.56484 1.14390 1.77535 1.45747 1.57337 1.13698 1.21327 1.21814 0.98910 0.94591 0.85596 1.22092 0.90827 0.90731 0.90302 1.92873 1.71674 1.72537 1.79363 1.23735 0.97758 1.02317 0.94573 1.22511 0.98505 0.98887 0.92768 0.87676 1.22139 0.98719 0.86452 0.91920 1.86489 1.88429 1.31451 1.31533 1.23560 1.02763 0.98578 0.93081 1.18462 0.93558 0.83489 0.91605 1.84752 1.46231 1.17804 1.79846 1.21326 1.00683 0.93780 0.98629 0.76661 0.90207 1.17302 1.17709 0.85481 0.84842 0.76125 0.89879 0.89109 0.87912 0.89677 0.93198 0.93106 0.77044 0.89119 0.87541 0.74261 0.83953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.38 12.81 -35.23 -0.45 -0.07 16 2 C -0.08 0.06 2.78 36.01 0.10 0.16 16 3 Si 0.69 -1.31 29.83 -169.99 -5.07 -6.38 16 4 C -0.03 -0.05 5.39 -104.58 -0.56 -0.61 16 5 C -0.14 -0.21 8.64 -39.64 -0.34 -0.55 16 6 C -0.06 -0.07 9.54 -39.20 -0.37 -0.44 16 7 C -0.16 -0.47 5.89 -104.84 -0.62 -1.09 16 8 C 0.56 2.06 7.76 -12.47 -0.10 1.97 16 9 O -0.52 -3.46 15.16 -16.59 -0.25 -3.72 16 10 N -0.73 -0.73 5.40 -61.35 -0.33 -1.06 16 11 C 0.11 0.00 5.43 -4.04 -0.02 -0.02 16 12 C 0.08 -0.06 1.74 -89.81 -0.16 -0.22 16 13 F -0.18 -0.27 16.58 2.25 0.04 -0.24 16 14 C -0.15 0.18 7.08 -25.92 -0.18 0.00 16 15 C -0.11 0.11 3.99 -89.81 -0.36 -0.25 16 16 H 0.11 0.04 8.14 -51.93 -0.42 -0.38 16 17 C 0.09 -0.13 6.88 37.16 0.26 0.12 16 18 O -0.57 -0.09 13.66 -35.23 -0.48 -0.57 16 19 C -0.14 0.29 7.10 -25.91 -0.18 0.10 16 20 C 0.18 0.57 6.72 -38.69 -0.26 0.31 16 21 O -0.47 -1.68 11.58 -40.52 -0.47 -2.15 16 22 C -0.13 -0.27 9.60 -39.47 -0.38 -0.65 16 23 H 0.39 -2.20 8.74 45.56 0.40 -1.80 16 24 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 25 H -0.25 -0.24 7.04 56.52 0.40 0.16 16 26 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 27 H 0.13 0.06 4.83 -52.48 -0.25 -0.19 16 28 H 0.13 -0.21 6.40 -52.48 -0.34 -0.54 16 29 H 0.40 -0.23 6.06 -40.82 -0.25 -0.48 16 30 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.09 -0.06 7.84 -51.93 -0.41 -0.46 16 32 H 0.10 -0.23 7.65 -51.93 -0.40 -0.63 16 33 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.05 -0.13 7.84 -51.93 -0.41 -0.54 16 35 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.38 -1.53 9.12 45.56 0.42 -1.11 16 37 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.11 -0.38 8.06 -51.93 -0.42 -0.80 16 39 H 0.40 -0.11 9.06 45.56 0.41 0.30 16 40 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 LS Contribution 340.04 15.07 5.12 5.12 Total: 0.00 -10.83 340.04 -8.47 -19.29 By element: Atomic # 1 Polarization: -5.68 SS G_CDS: -3.39 Total: -9.07 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -3.18 Total: -1.17 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.33 Total: -1.06 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -1.65 Total: -6.50 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.07 Total: -6.38 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -10.83 -8.47 -19.29 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13422076.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.596 kcal (2) G-P(sol) polarization free energy of solvation -10.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.293 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.889 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds