Wall clock time and date at job start Sun Mar 7 2021 08:58:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39206 * 119.92937 * 239.73104 * 4 2 1 6 6 C 1.50693 * 119.96798 * 359.97310 * 5 4 2 7 7 O 1.42906 * 109.46958 * 75.00154 * 6 5 4 8 8 Si 1.86295 * 109.47443 * 195.00119 * 6 5 4 9 9 C 1.37634 * 120.06756 * 179.72322 * 5 4 2 10 10 C 1.39785 * 119.92582 * 0.54888 * 9 5 4 11 11 C 1.47520 * 120.06381 * 179.70489 * 10 9 5 12 12 O 1.21594 * 120.00407 * 0.02562 * 11 10 9 13 13 N 1.34774 * 119.99765 * 180.02562 * 11 10 9 14 14 C 1.46499 * 120.00180 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47291 * 180.02562 * 14 13 11 16 16 F 1.39900 * 112.84964 * 314.66648 * 15 14 13 17 17 C 1.53782 * 113.61298 * 85.86962 * 15 14 13 18 18 C 1.53949 * 87.02010 * 139.95202 * 17 15 14 19 19 H 1.08999 * 113.61974 * 89.19837 * 18 17 15 20 20 C 1.53002 * 113.66455 * 220.06604 * 18 17 15 21 21 O 1.42898 * 109.47168 * 272.55479 * 20 18 17 22 22 C 1.53781 * 113.61145 * 183.47208 * 15 14 13 23 23 C 1.39809 * 119.86329 * 359.71902 * 10 9 5 24 24 C 1.37582 * 119.93561 * 0.02562 * 23 10 9 25 25 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 26 26 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 27 27 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 28 28 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 29 29 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 31 31 H 1.09001 * 109.47417 * 315.00615 * 6 5 4 32 32 H 0.96703 * 113.99755 * 179.97438 * 7 6 5 33 33 H 1.48499 * 110.00252 * 178.68068 * 8 6 5 34 34 H 1.48493 * 110.00296 * 300.00318 * 8 6 5 35 35 H 1.08000 * 120.03634 * 180.27094 * 9 5 4 36 36 H 0.97001 * 120.00096 * 0.02562 * 13 11 10 37 37 H 1.09000 * 109.47555 * 300.00585 * 14 13 11 38 38 H 1.09006 * 109.46682 * 60.00093 * 14 13 11 39 39 H 1.09001 * 113.61091 * 254.52652 * 17 15 14 40 40 H 1.08998 * 113.61676 * 25.42647 * 17 15 14 41 41 H 1.08993 * 109.47383 * 32.55744 * 20 18 17 42 42 H 1.09001 * 109.47042 * 152.55862 * 20 18 17 43 43 H 0.96703 * 114.00288 * 179.97438 * 21 20 18 44 44 H 1.08997 * 113.62014 * 334.56690 * 22 15 14 45 45 H 1.09007 * 113.61423 * 105.38953 * 22 15 14 46 46 H 1.08006 * 120.03034 * 179.97438 * 23 10 9 47 47 H 1.08001 * 119.96959 * 179.97438 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7839 -1.8297 -0.8520 6 6 3.1270 -2.2377 0.5575 7 8 1.9957 -2.8708 1.1589 8 14 4.5611 -3.4265 0.5282 9 6 3.2740 -2.5528 -1.9156 10 6 2.9603 -2.1699 -3.2228 11 6 3.4893 -2.9389 -4.3652 12 8 4.1985 -3.9071 -4.1703 13 7 3.1864 -2.5682 -5.6251 14 6 3.7121 -3.3314 -6.7597 15 6 3.2225 -2.7047 -8.0667 16 9 1.8597 -2.3894 -8.0409 17 6 4.1115 -1.5552 -8.5697 18 6 3.9016 -2.1197 -9.9865 19 1 3.0262 -1.7134 -10.4932 20 6 5.1607 -2.0834 -10.8548 21 8 5.2455 -0.8208 -11.5185 22 6 3.6509 -3.4835 -9.3216 23 6 2.1444 -1.0565 -3.4454 24 6 1.6533 -0.3409 -2.3778 25 1 -0.3634 -1.0252 0.0708 26 1 -0.3633 0.4513 -0.9233 27 1 -0.3633 0.5740 0.8525 28 1 1.6461 1.8947 0.8901 29 1 3.0851 1.3422 0.0005 30 1 1.6460 1.8948 -0.8900 31 1 3.3990 -1.3545 1.1355 32 1 2.1451 -3.1607 2.0693 33 1 4.9298 -3.8119 1.9141 34 1 4.2030 -4.6351 -0.2567 35 1 3.9039 -3.4124 -1.7405 36 1 2.6209 -1.7956 -5.7807 37 1 4.8017 -3.3150 -6.7351 38 1 3.3629 -4.3621 -6.6972 39 1 3.6734 -0.5680 -8.4227 40 1 5.1431 -1.6173 -8.2233 41 1 6.0399 -2.2231 -10.2260 42 1 5.1139 -2.8811 -11.5962 43 1 6.0216 -0.7268 -12.0876 44 1 4.5563 -4.0739 -9.1813 45 1 2.8417 -4.0521 -9.7801 46 1 1.9007 -0.7580 -4.4543 47 1 1.0233 0.5194 -2.5491 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:35 Heat of formation + Delta-G solvation = -92.177514 kcal Electronic energy + Delta-G solvation = -29740.546397 eV Core-core repulsion = 25419.719533 eV Total energy + Delta-G solvation = -4320.826864 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.168 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -48.89736 -41.70379 -40.52176 -39.75226 -37.85213 -37.35038 -37.16246 -35.78373 -33.07170 -31.59242 -30.11261 -28.52139 -27.47189 -27.00639 -26.92262 -25.65063 -23.29397 -22.81672 -22.23862 -21.23483 -20.62011 -19.11419 -18.50061 -18.27221 -17.86942 -17.68588 -17.07589 -16.83926 -16.61150 -16.35322 -16.22838 -16.06559 -15.91734 -15.71163 -15.40433 -15.09597 -14.99733 -14.79206 -14.56698 -14.34297 -14.06632 -13.83424 -13.79319 -13.60496 -13.40127 -13.32496 -13.20315 -13.01502 -12.72663 -12.62865 -12.37788 -12.13512 -11.93252 -11.88878 -11.55642 -11.34741 -11.15893 -10.80656 -10.41177 -10.36927 -10.14108 -9.81676 -9.50917 -4.99057 -0.41476 0.12110 1.26175 1.51936 1.59185 1.88132 1.90873 2.56904 2.79256 3.03297 3.10671 3.13738 3.33391 3.38230 3.51102 3.61297 3.72616 3.77259 3.83154 4.03203 4.12229 4.22347 4.24720 4.35863 4.38204 4.43447 4.45419 4.47302 4.54865 4.60619 4.62062 4.63915 4.66270 4.71372 4.78127 4.84501 4.90682 4.96804 4.97999 5.00229 5.03665 5.10523 5.17025 5.23822 5.37847 5.53080 5.86392 6.26059 6.29662 6.64543 6.89572 6.98793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.520 5.520 3 C 0.024 3.976 4 C 0.140 3.860 5 C -0.075 4.075 6 C -0.051 4.051 7 O -0.546 6.546 8 Si 0.733 3.267 9 C -0.065 4.065 10 C -0.150 4.150 11 C 0.561 3.439 12 O -0.574 6.574 13 N -0.713 5.713 14 C 0.112 3.888 15 C 0.079 3.921 16 F -0.198 7.198 17 C -0.141 4.141 18 C -0.113 4.113 19 H 0.085 0.915 20 C 0.083 3.917 21 O -0.599 6.599 22 C -0.134 4.134 23 C -0.057 4.057 24 C -0.156 4.156 25 H 0.057 0.943 26 H 0.041 0.959 27 H 0.085 0.915 28 H 0.085 0.915 29 H 0.074 0.926 30 H 0.041 0.959 31 H 0.097 0.903 32 H 0.392 0.608 33 H -0.275 1.275 34 H -0.308 1.308 35 H 0.129 0.871 36 H 0.413 0.587 37 H 0.102 0.898 38 H 0.074 0.926 39 H 0.079 0.921 40 H 0.117 0.883 41 H 0.065 0.935 42 H 0.058 0.942 43 H 0.397 0.603 44 H 0.126 0.874 45 H 0.088 0.912 46 H 0.155 0.845 47 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.322 5.386 -2.154 6.248 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 N -0.241 5.241 3 C -0.122 4.122 4 C 0.046 3.954 5 C -0.076 4.076 6 C -0.161 4.161 7 O -0.356 6.356 8 Si 0.640 3.360 9 C -0.084 4.084 10 C -0.153 4.153 11 C 0.350 3.650 12 O -0.455 6.455 13 N -0.365 5.365 14 C -0.012 4.012 15 C 0.060 3.940 16 F -0.179 7.179 17 C -0.178 4.178 18 C -0.131 4.131 19 H 0.104 0.896 20 C 0.006 3.994 21 O -0.407 6.407 22 C -0.172 4.172 23 C -0.077 4.077 24 C -0.176 4.176 25 H 0.076 0.924 26 H 0.059 0.941 27 H 0.104 0.896 28 H 0.104 0.896 29 H 0.093 0.907 30 H 0.060 0.940 31 H 0.115 0.885 32 H 0.241 0.759 33 H -0.202 1.202 34 H -0.236 1.236 35 H 0.147 0.853 36 H 0.251 0.749 37 H 0.120 0.880 38 H 0.092 0.908 39 H 0.098 0.902 40 H 0.135 0.865 41 H 0.084 0.916 42 H 0.076 0.924 43 H 0.247 0.753 44 H 0.144 0.856 45 H 0.106 0.894 46 H 0.172 0.828 47 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.412 3.946 -1.634 4.905 hybrid contribution -1.119 0.031 -0.221 1.142 sum 1.293 3.977 -1.855 4.575 Atomic orbital electron populations 1.22437 0.84705 1.02376 1.01920 1.59386 1.09388 1.15048 1.40302 1.22566 1.01184 0.86135 1.02273 1.18961 0.93592 0.93197 0.89684 1.19251 0.99071 0.95367 0.93880 1.24538 0.95873 1.03180 0.92553 1.86546 1.36441 1.79357 1.33223 0.94496 0.82717 0.79592 0.79198 1.21147 0.97683 0.98053 0.91505 1.19785 1.03700 0.99115 0.92745 1.18328 0.79707 0.83495 0.83478 1.90792 1.39531 1.29227 1.85905 1.45668 1.52822 1.33294 1.04744 1.21920 1.00751 0.95882 0.82608 1.22175 0.77035 0.99348 0.95423 1.92846 1.33675 1.93941 1.97431 1.23766 1.01104 0.97837 0.95091 1.22506 0.98904 0.96801 0.94937 0.89623 1.22226 0.96755 0.85327 0.95107 1.86439 1.51711 1.36802 1.65778 1.23576 1.04296 0.96605 0.92765 1.21402 0.93486 0.92199 1.00575 1.21848 1.01881 1.01663 0.92207 0.92447 0.94059 0.89587 0.89646 0.90744 0.94033 0.88547 0.75855 1.20163 1.23610 0.85324 0.74905 0.88020 0.90762 0.90242 0.86497 0.91643 0.92389 0.75281 0.85573 0.89373 0.82762 0.83126 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.34 127.69 1.19 1.17 16 2 N -0.52 -0.31 4.20 -745.08 -3.13 -3.44 16 3 C 0.02 -0.09 9.32 127.69 1.19 1.10 16 4 C 0.14 0.35 4.69 38.47 0.18 0.53 16 5 C -0.07 -0.38 5.30 -19.78 -0.10 -0.49 16 6 C -0.05 -0.16 2.32 71.23 0.17 0.01 16 7 O -0.55 -2.76 12.86 -148.98 -1.92 -4.68 16 8 Si 0.73 2.41 30.20 68.60 2.07 4.48 16 9 C -0.06 -0.47 8.19 22.50 0.18 -0.28 16 10 C -0.15 -0.74 5.88 -20.08 -0.12 -0.86 16 11 C 0.56 4.00 7.76 86.69 0.67 4.68 16 12 O -0.57 -8.50 16.34 -4.01 -0.07 -8.57 16 13 N -0.71 -0.61 5.40 -466.28 -2.52 -3.12 16 14 C 0.11 -0.10 5.41 86.38 0.47 0.37 16 15 C 0.08 -0.21 1.71 -10.27 -0.02 -0.22 16 16 F -0.20 -0.45 16.65 44.97 0.75 0.30 16 17 C -0.14 0.56 7.09 31.18 0.22 0.78 16 18 C -0.11 0.33 3.99 -10.21 -0.04 0.28 16 19 H 0.09 0.08 8.14 -2.39 -0.02 0.06 16 20 C 0.08 -0.37 6.89 71.98 0.50 0.13 16 21 O -0.60 0.35 13.66 -148.98 -2.03 -1.68 16 22 C -0.13 0.70 7.10 31.12 0.22 0.92 16 23 C -0.06 0.04 9.53 22.49 0.21 0.26 16 24 C -0.16 0.13 8.57 22.36 0.19 0.32 16 25 H 0.06 0.16 8.14 -2.39 -0.02 0.15 16 26 H 0.04 -0.12 7.10 -2.39 -0.02 -0.14 16 27 H 0.09 -0.26 8.14 -2.38 -0.02 -0.28 16 28 H 0.08 -0.46 8.14 -2.38 -0.02 -0.48 16 29 H 0.07 -0.29 8.12 -2.39 -0.02 -0.31 16 30 H 0.04 -0.22 7.45 -2.39 -0.02 -0.24 16 31 H 0.10 -0.01 7.78 -2.39 -0.02 -0.02 16 32 H 0.39 -1.04 8.74 -74.05 -0.65 -1.68 16 33 H -0.28 -1.59 7.11 99.48 0.71 -0.88 16 34 H -0.31 -3.85 6.74 99.48 0.67 -3.18 16 35 H 0.13 1.26 4.47 -2.91 -0.01 1.25 16 36 H 0.41 -1.33 6.09 -92.71 -0.56 -1.90 16 37 H 0.10 -0.26 7.87 -2.39 -0.02 -0.28 16 38 H 0.07 0.09 8.14 -2.38 -0.02 0.08 16 39 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 40 H 0.12 -0.79 7.68 -2.39 -0.02 -0.80 16 41 H 0.07 -0.49 7.85 -2.39 -0.02 -0.51 16 42 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.40 -3.53 9.12 -74.06 -0.68 -4.21 16 44 H 0.13 -1.16 8.06 -2.39 -0.02 -1.17 16 45 H 0.09 -0.39 8.14 -2.38 -0.02 -0.41 16 46 H 0.15 -1.04 6.39 -2.91 -0.02 -1.06 16 47 H 0.15 -0.76 7.01 -2.91 -0.02 -0.78 16 Total: 0.00 -22.82 385.10 -2.60 -25.41 By element: Atomic # 1 Polarization: -16.54 SS G_CDS: -0.87 Total: -17.40 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 5.11 Total: 8.69 kcal Atomic # 7 Polarization: -0.91 SS G_CDS: -5.65 Total: -6.56 kcal Atomic # 8 Polarization: -10.91 SS G_CDS: -4.02 Total: -14.92 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.75 Total: 0.30 kcal Atomic # 14 Polarization: 2.41 SS G_CDS: 2.07 Total: 4.48 kcal Total: -22.82 -2.60 -25.41 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.763 kcal (2) G-P(sol) polarization free energy of solvation -22.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds