Wall clock time and date at job start Sun Mar 7 2021 08:58:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47322 * 2 1 4 4 C 1.50691 * 109.47679 * 120.00749 * 2 1 3 5 5 C 1.32697 * 124.68968 * 65.27375 * 4 2 1 6 6 C 1.44502 * 113.10084 * 180.22103 * 5 4 2 7 7 C 1.47046 * 123.48893 * 179.81019 * 6 5 4 8 8 O 1.21659 * 119.99897 * 179.73031 * 7 6 5 9 9 N 1.34777 * 120.00159 * 359.72587 * 7 6 5 10 10 C 1.46506 * 119.99873 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.46684 * 180.02562 * 10 9 7 12 12 F 1.39890 * 112.85429 * 316.19661 * 11 10 9 13 13 C 1.53778 * 113.61377 * 87.50778 * 11 10 9 14 14 C 1.53781 * 87.08330 * 139.97641 * 13 11 10 15 15 H 1.09001 * 113.61407 * 89.11889 * 14 13 11 16 16 C 1.53002 * 113.69147 * 220.00809 * 14 13 11 17 17 O 1.42905 * 109.46967 * 272.53530 * 16 14 13 18 18 C 1.53774 * 87.07980 * 334.56637 * 14 13 11 19 19 C 1.36224 * 113.01680 * 359.54237 * 6 5 4 20 20 Cl 1.73595 * 124.60418 * 180.22355 * 19 6 5 21 21 S 1.70440 * 110.78887 * 0.24381 * 19 6 5 22 22 H 0.96708 * 113.99057 * 299.99853 * 1 2 3 23 23 H 1.09009 * 109.46713 * 240.00599 * 2 1 3 24 24 H 1.48499 * 109.99678 * 178.68607 * 3 2 1 25 25 H 1.48501 * 110.00058 * 300.00448 * 3 2 1 26 26 H 1.08000 * 123.44449 * 0.04248 * 5 4 2 27 27 H 0.96995 * 120.00018 * 0.27754 * 9 7 6 28 28 H 1.09000 * 109.47212 * 300.00355 * 10 9 7 29 29 H 1.09001 * 109.46577 * 60.00430 * 10 9 7 30 30 H 1.09003 * 113.61683 * 254.52849 * 13 11 10 31 31 H 1.09008 * 113.61715 * 25.42811 * 13 11 10 32 32 H 1.08999 * 109.47224 * 32.53570 * 16 14 13 33 33 H 1.08994 * 109.47334 * 152.53666 * 16 14 13 34 34 H 0.96704 * 114.00068 * 180.02562 * 17 16 14 35 35 H 1.08999 * 113.61743 * 270.88146 * 18 14 13 36 36 H 1.09004 * 113.68986 * 139.98850 * 18 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.7530 -2.0009 1.4829 6 6 2.3350 -2.4187 2.7378 7 6 2.2683 -3.7977 3.2440 8 8 2.7855 -4.0807 4.3082 9 7 1.6342 -4.7480 2.5290 10 6 1.5683 -6.1221 3.0330 11 6 0.7998 -6.9939 2.0380 12 9 -0.3567 -6.3742 1.5529 13 6 1.6858 -7.5980 0.9358 14 6 0.8645 -8.8887 1.0923 15 1 -0.0186 -8.9244 0.4543 16 6 1.7047 -10.1651 1.0156 17 8 1.8288 -10.5724 -0.3486 18 6 0.5676 -8.4322 2.5304 19 6 2.9569 -1.4039 3.4006 20 17 3.7599 -1.5717 4.9304 21 16 2.8389 0.0530 2.5239 22 1 -0.3932 0.4417 0.7652 23 1 1.7923 -0.5138 -0.8901 24 1 3.5346 1.7702 0.0320 25 1 1.5615 2.4680 -1.2084 26 1 1.2242 -2.6697 0.8200 27 1 1.2254 -4.5233 1.6786 28 1 2.5784 -6.5136 3.1541 29 1 1.0571 -6.1317 3.9957 30 1 1.5635 -7.1177 -0.0350 31 1 2.7307 -7.7074 1.2264 32 1 2.6948 -9.9737 1.4291 33 1 1.2184 -10.9551 1.5878 34 1 2.3500 -11.3774 -0.4729 35 1 1.3067 -8.7696 3.2570 36 1 -0.4571 -8.6248 2.8483 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:42 Heat of formation + Delta-G solvation = -108.455857 kcal Electronic energy + Delta-G solvation = -24195.452728 eV Core-core repulsion = 20135.311204 eV Total energy + Delta-G solvation = -4060.141524 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.043 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -48.90034 -41.12265 -39.86058 -38.91221 -38.01510 -37.20726 -36.97264 -35.66234 -31.76635 -30.43672 -27.67278 -27.03318 -26.83142 -25.12942 -22.26989 -22.22296 -20.97699 -20.54099 -19.44688 -18.34298 -18.21555 -17.91679 -17.20296 -16.97278 -16.65006 -16.43002 -16.32309 -16.05407 -15.81223 -15.71320 -15.16847 -14.94383 -14.74461 -14.69343 -14.35892 -14.08779 -14.04897 -13.76594 -13.40750 -13.21529 -12.93858 -12.61906 -12.39072 -12.38128 -12.20070 -11.90032 -11.88604 -11.50912 -11.35074 -11.01624 -10.82275 -10.59346 -10.32765 -9.92733 -9.67035 -5.14768 -0.66416 -0.21580 0.44778 0.67521 1.01533 1.17208 1.57272 1.89330 2.00895 2.10956 3.02257 3.09982 3.14025 3.26395 3.33621 3.52339 3.58814 3.78028 3.82207 3.86160 4.23897 4.32681 4.34605 4.41811 4.44835 4.56158 4.59254 4.62128 4.70270 4.74506 4.83422 4.89431 4.92424 4.97096 5.19760 5.36895 6.29872 6.68631 6.87827 7.01602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.023 4.023 3 Si 0.719 3.281 4 C -0.229 4.229 5 C -0.072 4.072 6 C -0.170 4.170 7 C 0.573 3.427 8 O -0.555 6.555 9 N -0.713 5.713 10 C 0.116 3.884 11 C 0.080 3.920 12 F -0.198 7.198 13 C -0.142 4.142 14 C -0.113 4.113 15 H 0.086 0.914 16 C 0.083 3.917 17 O -0.599 6.599 18 C -0.133 4.133 19 C -0.137 4.137 20 Cl 0.007 6.993 21 S 0.275 5.725 22 H 0.398 0.602 23 H 0.133 0.867 24 H -0.259 1.259 25 H -0.266 1.266 26 H 0.172 0.828 27 H 0.412 0.588 28 H 0.098 0.902 29 H 0.077 0.923 30 H 0.076 0.924 31 H 0.115 0.885 32 H 0.064 0.936 33 H 0.059 0.941 34 H 0.397 0.603 35 H 0.126 0.874 36 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.263 0.137 -1.131 1.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.137 4.137 3 Si 0.621 3.379 4 C -0.346 4.346 5 C -0.101 4.101 6 C -0.189 4.189 7 C 0.359 3.641 8 O -0.435 6.435 9 N -0.365 5.365 10 C -0.008 4.008 11 C 0.061 3.939 12 F -0.178 7.178 13 C -0.180 4.180 14 C -0.132 4.132 15 H 0.104 0.896 16 C 0.006 3.994 17 O -0.407 6.407 18 C -0.171 4.171 19 C -0.283 4.283 20 Cl 0.035 6.965 21 S 0.540 5.460 22 H 0.249 0.751 23 H 0.150 0.850 24 H -0.185 1.185 25 H -0.191 1.191 26 H 0.189 0.811 27 H 0.249 0.751 28 H 0.116 0.884 29 H 0.095 0.905 30 H 0.095 0.905 31 H 0.133 0.867 32 H 0.082 0.918 33 H 0.077 0.923 34 H 0.247 0.753 35 H 0.144 0.856 36 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.853 2.208 -1.044 2.588 hybrid contribution -0.351 -2.473 -0.453 2.538 sum 0.502 -0.264 -1.497 1.601 Atomic orbital electron populations 1.86526 1.16253 1.82034 1.50435 1.24517 0.85491 1.09167 0.94484 0.94284 0.79780 0.75429 0.88421 1.24964 1.08248 0.98509 1.02903 1.21099 0.99112 0.95619 0.94220 1.20264 1.06709 0.94143 0.97826 1.17635 0.78159 0.84478 0.83826 1.90859 1.47227 1.82405 1.22974 1.45617 1.57000 1.08917 1.24985 1.21882 1.01630 0.80409 0.96918 1.22153 0.83194 0.92573 0.95969 1.92844 1.51372 1.84313 1.89280 1.23741 0.99885 0.95739 0.98615 1.22477 0.99247 0.94052 0.97374 0.89602 1.22229 0.99054 0.95371 0.82760 1.86443 1.77587 1.49548 1.27164 1.23573 1.05211 0.91272 0.97072 1.25798 1.04454 1.02127 0.95969 1.98426 1.76307 1.97508 1.24217 1.83133 1.49635 1.04590 1.08593 0.75128 0.85034 1.18494 1.19084 0.81093 0.75126 0.88407 0.90475 0.90509 0.86690 0.91754 0.92263 0.75290 0.85595 0.89231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.39 12.88 -148.98 -1.92 0.47 16 2 C -0.02 0.12 2.94 71.23 0.21 0.33 16 3 Si 0.72 -3.83 30.92 68.60 2.12 -1.71 16 4 C -0.23 0.77 5.65 24.51 0.14 0.91 16 5 C -0.07 0.12 9.75 22.70 0.22 0.34 16 6 C -0.17 -0.63 5.98 -19.84 -0.12 -0.75 16 7 C 0.57 3.82 7.79 86.55 0.67 4.50 16 8 O -0.56 -7.37 14.91 -4.22 -0.06 -7.44 16 9 N -0.71 -0.86 5.43 -466.71 -2.53 -3.39 16 10 C 0.12 -0.08 5.43 86.38 0.47 0.39 16 11 C 0.08 -0.16 1.74 -10.27 -0.02 -0.18 16 12 F -0.20 -0.56 16.59 44.97 0.75 0.19 16 13 C -0.14 0.42 7.08 31.12 0.22 0.64 16 14 C -0.11 0.25 3.98 -10.27 -0.04 0.21 16 15 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 16 C 0.08 -0.31 6.89 71.98 0.50 0.18 16 17 O -0.60 -0.05 13.66 -148.98 -2.04 -2.09 16 18 C -0.13 0.64 7.10 31.12 0.22 0.86 16 19 C -0.14 -0.56 6.87 67.35 0.46 -0.10 16 20 Cl 0.01 0.05 27.20 -2.72 -0.07 -0.03 16 21 S 0.28 -0.64 20.19 -56.49 -1.14 -1.78 16 22 H 0.40 -4.72 8.70 -74.05 -0.64 -5.37 16 23 H 0.13 -0.75 7.96 -2.38 -0.02 -0.77 16 24 H -0.26 0.28 7.11 99.48 0.71 0.99 16 25 H -0.27 -0.28 7.11 99.48 0.71 0.43 16 26 H 0.17 -0.88 7.10 -2.91 -0.02 -0.91 16 27 H 0.41 -0.86 6.58 -92.71 -0.61 -1.47 16 28 H 0.10 -0.19 7.84 -2.39 -0.02 -0.20 16 29 H 0.08 0.07 8.14 -2.39 -0.02 0.05 16 30 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 31 H 0.11 -0.63 7.65 -2.38 -0.02 -0.65 16 32 H 0.06 -0.44 7.85 -2.39 -0.02 -0.45 16 33 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 34 H 0.40 -3.29 9.12 -74.05 -0.68 -3.96 16 35 H 0.13 -1.11 8.06 -2.39 -0.02 -1.13 16 36 H 0.09 -0.38 8.14 -2.38 -0.02 -0.40 16 Total: 0.00 -19.93 338.75 -2.69 -22.62 By element: Atomic # 1 Polarization: -13.45 SS G_CDS: -0.73 Total: -14.18 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 2.93 Total: 7.33 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -2.53 Total: -3.39 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -4.02 Total: -9.06 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.75 Total: 0.19 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: 2.12 Total: -1.71 kcal Atomic # 16 Polarization: -0.64 SS G_CDS: -1.14 Total: -1.78 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -0.07 Total: -0.03 kcal Total: -19.93 -2.69 -22.62 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.832 kcal (2) G-P(sol) polarization free energy of solvation -19.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.766 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.690 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.623 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds