Wall clock time and date at job start Sun Mar 7 2021 08:58:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.34179 * 125.43840 * 300.00269 * 4 2 1 6 6 C 1.47016 * 105.95353 * 179.97438 * 5 4 2 7 7 C 1.47382 * 127.19632 * 180.02562 * 6 5 4 8 8 O 1.21615 * 119.99249 * 359.97438 * 7 6 5 9 9 N 1.34774 * 120.00615 * 179.97438 * 7 6 5 10 10 C 1.46496 * 120.00069 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47204 * 179.97438 * 10 9 7 12 12 F 1.39905 * 112.84809 * 316.19904 * 11 10 9 13 13 C 1.53784 * 113.61298 * 87.50162 * 11 10 9 14 14 C 1.53789 * 87.07884 * 139.98277 * 13 11 10 15 15 H 1.08997 * 113.68728 * 89.12641 * 14 13 11 16 16 C 1.52991 * 113.61364 * 220.01967 * 14 13 11 17 17 O 1.42901 * 109.47294 * 272.49799 * 16 14 13 18 18 C 1.53779 * 113.61349 * 185.00241 * 11 10 9 19 19 C 1.36421 * 105.61965 * 359.97438 * 6 5 4 20 20 O 1.33657 * 108.39134 * 359.75549 * 19 6 5 21 21 H 0.96698 * 113.99898 * 59.99565 * 1 2 3 22 22 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 23 23 H 1.48503 * 110.00152 * 60.00114 * 3 2 1 24 24 H 1.48498 * 110.00118 * 181.32340 * 3 2 1 25 25 H 1.08001 * 127.02093 * 359.97438 * 5 4 2 26 26 H 0.96993 * 119.99614 * 359.97438 * 9 7 6 27 27 H 1.08997 * 109.47676 * 300.00160 * 10 9 7 28 28 H 1.09007 * 109.47032 * 59.99617 * 10 9 7 29 29 H 1.08999 * 113.61351 * 254.52548 * 13 11 10 30 30 H 1.09001 * 113.61269 * 25.43956 * 13 11 10 31 31 H 1.09005 * 109.47479 * 32.49560 * 16 14 13 32 32 H 1.09001 * 109.47450 * 152.50010 * 16 14 13 33 33 H 0.96701 * 114.00533 * 180.02562 * 17 16 14 34 34 H 1.09000 * 113.61926 * 334.56149 * 18 11 10 35 35 H 1.08998 * 113.61722 * 105.38989 * 18 11 10 36 36 H 1.07996 * 125.80437 * 180.02562 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6752 -1.9882 -1.5501 6 6 2.3678 -2.2327 -2.8237 7 6 2.3960 -3.4877 -3.5959 8 8 1.8004 -4.4662 -3.1877 9 7 3.0818 -3.5509 -4.7544 10 6 3.1102 -4.7985 -5.5216 11 6 3.9510 -4.6016 -6.7846 12 9 3.6819 -3.3914 -7.4331 13 6 5.4506 -4.8698 -6.5744 14 6 5.4420 -5.5498 -7.9538 15 1 5.6414 -4.8671 -8.7798 16 6 6.2907 -6.8212 -8.0156 17 8 7.6383 -6.4789 -8.3455 18 6 3.9452 -5.8187 -7.7245 19 6 2.9781 -1.0549 -3.1419 20 8 2.7005 -0.1640 -2.1850 21 1 -0.3933 0.4418 -0.7650 22 1 1.7923 -0.5139 0.8900 23 1 1.5616 2.4679 1.2085 24 1 3.5346 1.7703 -0.0322 25 1 1.0815 -2.6930 -0.9869 26 1 3.5565 -2.7703 -5.0801 27 1 3.5481 -5.5896 -4.9130 28 1 2.0940 -5.0761 -5.8017 29 1 6.0553 -3.9637 -6.5381 30 1 5.6607 -5.5535 -5.7519 31 1 6.2694 -7.3198 -7.0465 32 1 5.8888 -7.4897 -8.7770 33 1 8.2344 -7.2381 -8.4025 34 1 3.7440 -6.7618 -7.2164 35 1 3.3337 -5.6792 -8.6159 36 1 3.5794 -0.8719 -4.0202 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:46 Heat of formation + Delta-G solvation = -118.196909 kcal Electronic energy + Delta-G solvation = -22246.888715 eV Core-core repulsion = 18422.053900 eV Total energy + Delta-G solvation = -3824.834814 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 286.109 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -48.93308 -43.73382 -40.57954 -39.82070 -38.06021 -37.29964 -35.63087 -33.96070 -32.00925 -30.27804 -27.59626 -27.19106 -26.57029 -24.54605 -22.34606 -22.25982 -21.17229 -20.65200 -19.46089 -18.40990 -17.99363 -17.61000 -17.47194 -17.34653 -16.97685 -16.55683 -16.44696 -16.12754 -15.93288 -15.67267 -15.48477 -15.04072 -14.57276 -14.26143 -14.20322 -13.99009 -13.86959 -13.61649 -13.58685 -13.33613 -12.87894 -12.50751 -12.15097 -12.03240 -11.64447 -11.47281 -11.10398 -10.97988 -10.89570 -10.68243 -10.25036 -9.81565 -5.08003 0.20900 0.87764 1.11399 1.44078 1.76087 1.88406 1.93272 2.31588 2.85430 2.95580 3.01201 3.17480 3.19796 3.36371 3.40220 3.56867 3.63060 3.90454 4.10274 4.18017 4.23012 4.30077 4.32809 4.39509 4.40205 4.49454 4.52400 4.57715 4.68049 4.76247 4.77694 4.81006 5.14648 5.21281 5.26861 5.81202 6.33265 6.36841 6.56327 7.12852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.029 4.029 3 Si 0.707 3.293 4 C -0.058 4.058 5 C -0.123 4.123 6 C -0.238 4.238 7 C 0.590 3.410 8 O -0.530 6.530 9 N -0.726 5.726 10 C 0.115 3.885 11 C 0.080 3.920 12 F -0.184 7.184 13 C -0.146 4.146 14 C -0.108 4.108 15 H 0.105 0.895 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.142 4.142 19 C 0.034 3.966 20 O -0.165 6.165 21 H 0.384 0.616 22 H 0.133 0.867 23 H -0.247 1.247 24 H -0.253 1.253 25 H 0.162 0.838 26 H 0.402 0.598 27 H 0.091 0.909 28 H 0.083 0.917 29 H 0.085 0.915 30 H 0.102 0.898 31 H 0.050 0.950 32 H 0.051 0.949 33 H 0.382 0.618 34 H 0.106 0.894 35 H 0.090 0.910 36 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.063 0.636 -3.158 3.825 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.606 3.394 4 C -0.107 4.107 5 C -0.142 4.142 6 C -0.243 4.243 7 C 0.378 3.622 8 O -0.407 6.407 9 N -0.379 5.379 10 C -0.009 4.009 11 C 0.061 3.939 12 F -0.164 7.164 13 C -0.184 4.184 14 C -0.127 4.127 15 H 0.123 0.877 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.180 4.180 19 C -0.037 4.037 20 O -0.061 6.061 21 H 0.232 0.768 22 H 0.150 0.850 23 H -0.171 1.171 24 H -0.177 1.177 25 H 0.180 0.820 26 H 0.237 0.763 27 H 0.109 0.891 28 H 0.102 0.898 29 H 0.104 0.896 30 H 0.121 0.879 31 H 0.068 0.932 32 H 0.069 0.931 33 H 0.230 0.770 34 H 0.124 0.876 35 H 0.109 0.891 36 H 0.231 0.769 Dipole moment (debyes) X Y Z Total from point charges 2.015 1.132 -1.872 2.974 hybrid contribution 0.497 -1.044 -0.326 1.201 sum 2.511 0.087 -2.197 3.338 Atomic orbital electron populations 1.86576 1.16045 1.81748 1.49134 1.24451 0.85279 1.11347 0.92823 0.94232 0.81416 0.76547 0.87195 1.22754 0.99960 0.94191 0.93771 1.22527 1.01125 0.95491 0.95088 1.21469 1.07936 0.95063 0.99821 1.17240 0.78326 0.86783 0.79865 1.90827 1.43883 1.36895 1.69130 1.45641 1.54011 1.15007 1.23252 1.21824 1.01341 0.87472 0.90284 1.22082 0.97066 0.82546 0.92180 1.92873 1.94882 1.46075 1.82586 1.23734 0.93615 1.02660 0.98355 1.22511 0.93842 0.97705 0.98619 0.87655 1.22143 0.82436 0.95604 0.99085 1.86485 1.19962 1.37890 1.93581 1.23562 0.96604 0.97696 1.00165 1.24500 0.99346 0.87008 0.92798 1.83691 1.54836 1.39770 1.27791 0.76778 0.84956 1.17131 1.17722 0.81993 0.76298 0.89086 0.89837 0.89637 0.87912 0.93201 0.93114 0.77033 0.87560 0.89102 0.76935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.19 12.86 -35.23 -0.45 -0.26 16 2 C -0.03 0.02 2.97 36.01 0.11 0.13 16 3 Si 0.71 -1.05 32.09 -169.99 -5.45 -6.51 16 4 C -0.06 -0.03 6.20 -35.74 -0.22 -0.25 16 5 C -0.12 -0.25 10.88 -37.46 -0.41 -0.66 16 6 C -0.24 -0.34 6.31 -103.27 -0.65 -1.00 16 7 C 0.59 1.64 7.81 -12.54 -0.10 1.54 16 8 O -0.53 -3.60 16.98 5.26 0.09 -3.51 16 9 N -0.73 0.21 5.44 -61.40 -0.33 -0.12 16 10 C 0.11 -0.10 5.42 -4.05 -0.02 -0.12 16 11 C 0.08 -0.13 1.74 -89.81 -0.16 -0.29 16 12 F -0.18 -0.06 16.58 2.25 0.04 -0.02 16 13 C -0.15 0.29 7.08 -25.91 -0.18 0.11 16 14 C -0.11 0.17 3.99 -89.80 -0.36 -0.19 16 15 H 0.11 -0.02 8.14 -51.93 -0.42 -0.44 16 16 C 0.09 -0.17 6.88 37.15 0.26 0.09 16 17 O -0.57 0.12 13.66 -35.23 -0.48 -0.36 16 18 C -0.14 0.38 7.10 -25.92 -0.18 0.19 16 19 C 0.03 -0.05 11.61 30.08 0.35 0.30 16 20 O -0.16 0.05 8.89 7.64 0.07 0.11 16 21 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 22 H 0.13 -0.12 7.96 -51.93 -0.41 -0.53 16 23 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 24 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 25 H 0.16 0.41 8.06 -52.49 -0.42 -0.01 16 26 H 0.40 -1.02 7.00 -40.82 -0.29 -1.31 16 27 H 0.09 -0.11 7.84 -51.93 -0.41 -0.51 16 28 H 0.08 -0.01 8.14 -51.92 -0.42 -0.43 16 29 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.10 -0.29 7.65 -51.93 -0.40 -0.69 16 31 H 0.05 -0.15 7.84 -51.93 -0.41 -0.56 16 32 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.38 -1.64 9.12 45.56 0.42 -1.23 16 34 H 0.11 -0.44 8.06 -51.93 -0.42 -0.85 16 35 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 36 H 0.21 -1.19 7.47 -52.49 -0.39 -1.59 16 LS Contribution 319.13 15.07 4.81 4.81 Total: 0.00 -10.03 319.13 -6.93 -16.96 By element: Atomic # 1 Polarization: -7.33 SS G_CDS: -3.64 Total: -10.97 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -1.57 Total: -0.13 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.33 Total: -0.12 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -0.78 Total: -4.01 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.04 Total: -0.02 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.45 Total: -6.51 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -10.03 -6.93 -16.96 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.236 kcal (2) G-P(sol) polarization free energy of solvation -10.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.961 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds