Wall clock time and date at job start Sun Mar 7 2021 08:58:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.34179 * 125.43840 * 300.00269 * 4 2 1 6 6 C 1.47016 * 105.95353 * 179.97438 * 5 4 2 7 7 C 1.47382 * 127.19632 * 180.02562 * 6 5 4 8 8 O 1.21615 * 119.99249 * 359.97438 * 7 6 5 9 9 N 1.34774 * 120.00615 * 179.97438 * 7 6 5 10 10 C 1.46496 * 120.00069 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47204 * 179.97438 * 10 9 7 12 12 F 1.39905 * 112.84809 * 316.19904 * 11 10 9 13 13 C 1.53784 * 113.61298 * 87.50162 * 11 10 9 14 14 C 1.53789 * 87.07884 * 139.98277 * 13 11 10 15 15 H 1.08997 * 113.68728 * 89.12641 * 14 13 11 16 16 C 1.52991 * 113.61364 * 220.01967 * 14 13 11 17 17 O 1.42901 * 109.47294 * 272.49799 * 16 14 13 18 18 C 1.53779 * 113.61349 * 185.00241 * 11 10 9 19 19 C 1.36421 * 105.61965 * 359.97438 * 6 5 4 20 20 O 1.33657 * 108.39134 * 359.75549 * 19 6 5 21 21 H 0.96698 * 113.99898 * 59.99565 * 1 2 3 22 22 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 23 23 H 1.48503 * 110.00152 * 60.00114 * 3 2 1 24 24 H 1.48498 * 110.00118 * 181.32340 * 3 2 1 25 25 H 1.08001 * 127.02093 * 359.97438 * 5 4 2 26 26 H 0.96993 * 119.99614 * 359.97438 * 9 7 6 27 27 H 1.08997 * 109.47676 * 300.00160 * 10 9 7 28 28 H 1.09007 * 109.47032 * 59.99617 * 10 9 7 29 29 H 1.08999 * 113.61351 * 254.52548 * 13 11 10 30 30 H 1.09001 * 113.61269 * 25.43956 * 13 11 10 31 31 H 1.09005 * 109.47479 * 32.49560 * 16 14 13 32 32 H 1.09001 * 109.47450 * 152.50010 * 16 14 13 33 33 H 0.96701 * 114.00533 * 180.02562 * 17 16 14 34 34 H 1.09000 * 113.61926 * 334.56149 * 18 11 10 35 35 H 1.08998 * 113.61722 * 105.38989 * 18 11 10 36 36 H 1.07996 * 125.80437 * 180.02562 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6752 -1.9882 -1.5501 6 6 2.3678 -2.2327 -2.8237 7 6 2.3960 -3.4877 -3.5959 8 8 1.8004 -4.4662 -3.1877 9 7 3.0818 -3.5509 -4.7544 10 6 3.1102 -4.7985 -5.5216 11 6 3.9510 -4.6016 -6.7846 12 9 3.6819 -3.3914 -7.4331 13 6 5.4506 -4.8698 -6.5744 14 6 5.4420 -5.5498 -7.9538 15 1 5.6414 -4.8671 -8.7798 16 6 6.2907 -6.8212 -8.0156 17 8 7.6383 -6.4789 -8.3455 18 6 3.9452 -5.8187 -7.7245 19 6 2.9781 -1.0549 -3.1419 20 8 2.7005 -0.1640 -2.1850 21 1 -0.3933 0.4418 -0.7650 22 1 1.7923 -0.5139 0.8900 23 1 1.5616 2.4679 1.2085 24 1 3.5346 1.7703 -0.0322 25 1 1.0815 -2.6930 -0.9869 26 1 3.5565 -2.7703 -5.0801 27 1 3.5481 -5.5896 -4.9130 28 1 2.0940 -5.0761 -5.8017 29 1 6.0553 -3.9637 -6.5381 30 1 5.6607 -5.5535 -5.7519 31 1 6.2694 -7.3198 -7.0465 32 1 5.8888 -7.4897 -8.7770 33 1 8.2344 -7.2381 -8.4025 34 1 3.7440 -6.7618 -7.2164 35 1 3.3337 -5.6792 -8.6159 36 1 3.5794 -0.8719 -4.0202 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:45 Heat of formation + Delta-G solvation = -122.962545 kcal Electronic energy + Delta-G solvation = -22247.095368 eV Core-core repulsion = 18422.053900 eV Total energy + Delta-G solvation = -3825.041468 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 286.109 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -48.89113 -43.74689 -40.68415 -39.74847 -38.01372 -37.19971 -35.73690 -34.00562 -32.01003 -30.21505 -27.51694 -27.01632 -26.52741 -24.57380 -22.35461 -22.22307 -21.15991 -20.57597 -19.43814 -18.28175 -17.95495 -17.60313 -17.52173 -17.29699 -16.93437 -16.50373 -16.39680 -16.11200 -15.95586 -15.65624 -15.42436 -14.95110 -14.64616 -14.26225 -14.26068 -14.04759 -13.80987 -13.61325 -13.41266 -13.20988 -12.82595 -12.38058 -12.22196 -11.90214 -11.58885 -11.34851 -11.24392 -11.00121 -10.82132 -10.65284 -10.32390 -9.81036 -4.97976 0.21448 0.79060 1.18318 1.49115 1.80819 1.89204 1.95292 2.18291 3.02403 3.10324 3.12704 3.28628 3.33704 3.46257 3.53958 3.57751 3.81677 3.94647 4.23198 4.26750 4.34855 4.35947 4.45075 4.49267 4.56635 4.59738 4.63030 4.71315 4.83840 4.85432 4.90310 4.97516 5.09786 5.17852 5.37591 5.80402 6.32044 6.62077 6.88023 7.02068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.036 4.036 3 Si 0.797 3.203 4 C -0.052 4.052 5 C -0.150 4.150 6 C -0.269 4.269 7 C 0.589 3.411 8 O -0.582 6.582 9 N -0.712 5.712 10 C 0.114 3.886 11 C 0.082 3.918 12 F -0.195 7.195 13 C -0.142 4.142 14 C -0.113 4.113 15 H 0.087 0.913 16 C 0.082 3.918 17 O -0.598 6.598 18 C -0.135 4.135 19 C 0.065 3.935 20 O -0.163 6.163 21 H 0.400 0.600 22 H 0.131 0.869 23 H -0.284 1.284 24 H -0.288 1.288 25 H 0.146 0.854 26 H 0.414 0.586 27 H 0.096 0.904 28 H 0.075 0.925 29 H 0.080 0.920 30 H 0.114 0.886 31 H 0.063 0.937 32 H 0.058 0.942 33 H 0.397 0.603 34 H 0.124 0.876 35 H 0.089 0.911 36 H 0.258 0.742 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.728 1.167 -3.931 4.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.145 4.145 3 Si 0.700 3.300 4 C -0.100 4.100 5 C -0.170 4.170 6 C -0.274 4.274 7 C 0.378 3.622 8 O -0.463 6.463 9 N -0.364 5.364 10 C -0.010 4.010 11 C 0.064 3.936 12 F -0.176 7.176 13 C -0.179 4.179 14 C -0.132 4.132 15 H 0.106 0.894 16 C 0.005 3.995 17 O -0.407 6.407 18 C -0.173 4.173 19 C -0.005 4.005 20 O -0.059 6.059 21 H 0.251 0.749 22 H 0.148 0.852 23 H -0.211 1.211 24 H -0.214 1.214 25 H 0.164 0.836 26 H 0.252 0.748 27 H 0.114 0.886 28 H 0.093 0.907 29 H 0.099 0.901 30 H 0.132 0.868 31 H 0.082 0.918 32 H 0.076 0.924 33 H 0.247 0.753 34 H 0.142 0.858 35 H 0.108 0.892 36 H 0.274 0.726 Dipole moment (debyes) X Y Z Total from point charges 2.688 1.665 -2.694 4.154 hybrid contribution 0.324 -1.206 -0.094 1.252 sum 3.012 0.460 -2.788 4.130 Atomic orbital electron populations 1.86541 1.16174 1.82234 1.50333 1.24667 0.85326 1.12170 0.92353 0.93161 0.77878 0.73910 0.85021 1.22821 0.99582 0.93632 0.94015 1.22547 1.02196 0.96175 0.96036 1.21449 1.09976 0.95780 1.00175 1.17463 0.77810 0.86597 0.80303 1.90793 1.46319 1.38626 1.70543 1.45549 1.52925 1.15745 1.22226 1.21883 1.01154 0.87388 0.90582 1.22113 0.97158 0.82473 0.91901 1.92849 1.94986 1.46924 1.82821 1.23743 0.92990 1.02663 0.98528 1.22483 0.94690 0.97799 0.98187 0.89421 1.22235 0.81734 0.95443 1.00076 1.86438 1.21001 1.39535 1.93746 1.23584 0.95800 0.97961 0.99979 1.25256 0.97219 0.85392 0.92678 1.83719 1.54495 1.39834 1.27813 0.74895 0.85188 1.21077 1.21418 0.83623 0.74848 0.88585 0.90653 0.90116 0.86812 0.91833 0.92354 0.75297 0.85774 0.89197 0.72607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.25 12.86 -148.98 -1.92 -1.66 16 2 C -0.04 0.04 2.97 71.24 0.21 0.25 16 3 Si 0.80 -2.58 32.09 68.60 2.20 -0.38 16 4 C -0.05 -0.06 6.20 24.76 0.15 0.10 16 5 C -0.15 -0.82 10.88 23.65 0.26 -0.57 16 6 C -0.27 -0.87 6.31 -18.99 -0.12 -0.99 16 7 C 0.59 3.80 7.81 86.65 0.68 4.47 16 8 O -0.58 -9.09 16.98 -4.08 -0.07 -9.16 16 9 N -0.71 0.51 5.44 -466.42 -2.54 -2.02 16 10 C 0.11 -0.19 5.42 86.38 0.47 0.28 16 11 C 0.08 -0.30 1.74 -10.27 -0.02 -0.32 16 12 F -0.20 -0.07 16.58 44.97 0.75 0.68 16 13 C -0.14 0.64 7.08 31.12 0.22 0.86 16 14 C -0.11 0.38 3.99 -10.26 -0.04 0.34 16 15 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 16 C 0.08 -0.37 6.88 71.98 0.50 0.12 16 17 O -0.60 0.41 13.66 -148.98 -2.03 -1.63 16 18 C -0.14 0.79 7.10 31.12 0.22 1.01 16 19 C 0.07 -0.28 11.61 67.40 0.78 0.50 16 20 O -0.16 0.28 8.89 4.42 0.04 0.32 16 21 H 0.40 -3.47 8.70 -74.06 -0.64 -4.12 16 22 H 0.13 -0.14 7.96 -2.39 -0.02 -0.16 16 23 H -0.28 -0.81 7.11 99.48 0.71 -0.10 16 24 H -0.29 -0.74 7.11 99.48 0.71 -0.04 16 25 H 0.15 1.17 8.06 -2.91 -0.02 1.15 16 26 H 0.41 -2.55 7.00 -92.71 -0.65 -3.20 16 27 H 0.10 -0.23 7.84 -2.39 -0.02 -0.24 16 28 H 0.08 0.03 8.14 -2.38 -0.02 0.01 16 29 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 30 H 0.11 -0.76 7.65 -2.39 -0.02 -0.78 16 31 H 0.06 -0.47 7.84 -2.38 -0.02 -0.49 16 32 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 33 H 0.40 -3.53 9.12 -74.06 -0.68 -4.20 16 34 H 0.12 -1.17 8.06 -2.39 -0.02 -1.19 16 35 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 36 H 0.26 -3.71 7.47 -2.91 -0.02 -3.73 16 Total: 0.00 -24.98 319.13 -1.05 -26.04 By element: Atomic # 1 Polarization: -17.46 SS G_CDS: -0.79 Total: -18.25 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: 3.31 Total: 6.07 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -2.54 Total: -2.02 kcal Atomic # 8 Polarization: -8.15 SS G_CDS: -3.98 Total: -12.13 kcal Atomic # 9 Polarization: -0.07 SS G_CDS: 0.75 Total: 0.68 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.20 Total: -0.38 kcal Total: -24.98 -1.05 -26.04 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.924 kcal (2) G-P(sol) polarization free energy of solvation -24.984 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.038 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.963 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds