Wall clock time and date at job start Sun Mar 7 2021 08:58:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37876 * 126.45452 * 2 1 4 4 C 1.46680 * 126.23468 * 0.24762 * 3 2 1 5 5 O 1.21693 * 119.99937 * 359.70740 * 4 3 2 6 6 N 1.34771 * 119.99875 * 179.71008 * 4 3 2 7 7 C 1.46500 * 119.99658 * 179.97438 * 6 4 3 8 8 C 1.53003 * 109.47011 * 179.97438 * 7 6 4 9 9 F 1.39897 * 112.85029 * 48.80513 * 8 7 6 10 10 C 1.53783 * 113.61367 * 180.02562 * 8 7 6 11 11 C 1.53782 * 87.08159 * 139.98387 * 10 8 7 12 12 H 1.08998 * 113.61575 * 89.11379 * 11 10 8 13 13 C 1.53003 * 113.61035 * 219.93635 * 11 10 8 14 14 O 1.42904 * 109.46728 * 184.99604 * 13 11 10 15 15 C 1.53782 * 113.61217 * 277.49708 * 8 7 6 16 16 N 1.37655 * 107.53112 * 179.97438 * 3 2 1 17 17 C 1.35531 * 108.64328 * 0.02562 * 16 3 2 18 18 C 1.50706 * 125.56185 * 180.02562 * 17 16 3 19 19 O 1.42904 * 109.46876 * 119.97185 * 18 17 16 20 20 Si 1.86301 * 109.47074 * 359.97170 * 18 17 16 21 21 C 1.35452 * 108.87411 * 359.97438 * 17 16 3 22 22 H 1.09002 * 109.47116 * 89.99565 * 1 2 3 23 23 H 1.09001 * 109.46889 * 209.99704 * 1 2 3 24 24 H 1.08999 * 109.46738 * 329.99523 * 1 2 3 25 25 H 0.97000 * 120.00050 * 0.02562 * 6 4 3 26 26 H 1.08998 * 109.47368 * 300.00158 * 7 6 4 27 27 H 1.09001 * 109.47066 * 60.00219 * 7 6 4 28 28 H 1.09004 * 113.61072 * 254.52860 * 10 8 7 29 29 H 1.08994 * 113.61553 * 25.43163 * 10 8 7 30 30 H 1.09003 * 109.46781 * 304.99128 * 13 11 10 31 31 H 1.08999 * 109.47581 * 64.99536 * 13 11 10 32 32 H 0.96695 * 113.99576 * 179.97438 * 14 13 11 33 33 H 1.08996 * 113.61717 * 334.56507 * 15 8 7 34 34 H 1.09001 * 113.61069 * 105.47786 * 15 8 7 35 35 H 0.97003 * 125.67541 * 180.02562 * 16 3 2 36 36 H 1.08994 * 109.46802 * 239.96962 * 18 17 16 37 37 H 0.96701 * 113.99651 * 299.99760 * 19 18 17 38 38 H 1.48500 * 109.99924 * 58.68008 * 20 18 17 39 39 H 1.48500 * 110.00035 * 180.02562 * 20 18 17 40 40 H 1.08002 * 126.06766 * 179.97438 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1090 0.0000 4 6 1.8898 2.5093 0.0051 5 8 0.7026 2.7766 0.0045 6 7 2.8036 3.4999 0.0104 7 6 2.3677 4.8985 0.0149 8 6 3.5931 5.8147 0.0211 9 9 4.5387 5.4637 -0.9484 10 6 3.2427 7.3121 0.0268 11 6 4.4041 7.4996 1.0173 12 1 5.3633 7.6872 0.5350 13 6 4.0983 8.4943 2.1390 14 8 5.2687 8.6885 2.9355 15 6 4.1936 6.0308 1.4202 16 7 3.6284 0.6626 0.0006 17 6 3.6218 -0.6927 0.0004 18 6 4.8435 -1.5752 0.0014 19 8 4.8343 -2.3999 1.1684 20 14 6.3754 -0.5150 0.0022 21 6 2.3380 -1.1246 0.0002 22 1 -0.3633 0.0001 -1.0277 23 1 -0.3633 -0.8900 0.5138 24 1 -0.3633 0.8899 0.5139 25 1 3.7499 3.2868 0.0104 26 1 1.7705 5.0959 -0.8753 27 1 1.7675 5.0892 0.9047 28 1 3.4045 7.8020 -0.9334 29 1 2.2643 7.5299 0.4548 30 1 3.7911 9.4464 1.7064 31 1 3.2950 8.1026 2.7630 32 1 5.1479 9.3089 3.6673 33 1 3.4749 5.8986 2.2290 34 1 5.1232 5.4861 1.5852 35 1 4.4191 1.2245 0.0011 36 1 4.8377 -2.2047 -0.8884 37 1 4.8388 -1.9054 1.9994 38 1 6.3794 0.3708 1.1940 39 1 7.5872 -1.3733 0.0025 40 1 2.0137 -2.1548 -0.0003 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_13940406.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:48 Heat of formation + Delta-G solvation = -95.675538 kcal Electronic energy + Delta-G solvation = -24488.587292 eV Core-core repulsion = 20606.910120 eV Total energy + Delta-G solvation = -3881.677171 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -48.94958 -42.60046 -40.44969 -39.77204 -37.93874 -37.32564 -35.77105 -33.59256 -31.76897 -30.25188 -28.29696 -27.75249 -27.23794 -26.18666 -22.76362 -22.26845 -21.59087 -20.93225 -20.33365 -19.81123 -18.42911 -18.04446 -17.57071 -17.13528 -16.93496 -16.74449 -16.52323 -16.37654 -16.04648 -15.68008 -15.24417 -15.01401 -14.93704 -14.82356 -14.16934 -14.09904 -13.94422 -13.79574 -13.61579 -13.47930 -13.35866 -13.35174 -12.99165 -12.62094 -12.53870 -12.19552 -12.05435 -11.66159 -11.49535 -11.04109 -10.97009 -10.80098 -10.32624 -9.77567 -9.15358 -5.27845 0.33143 0.96331 1.26880 1.61278 1.67382 1.85595 1.96775 2.34824 2.83192 2.93775 2.99119 3.16178 3.16388 3.34083 3.55071 3.59893 3.78319 4.07327 4.15550 4.19017 4.27873 4.30482 4.36286 4.36805 4.38395 4.47696 4.49051 4.65156 4.72699 4.78725 4.78891 4.94320 5.03627 5.10895 5.20924 5.24458 5.47062 5.67347 5.93087 6.15628 6.24839 6.35722 6.54254 7.07684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.066 4.066 3 C -0.053 4.053 4 C 0.593 3.407 5 O -0.520 6.520 6 N -0.732 5.732 7 C 0.115 3.885 8 C 0.078 3.922 9 F -0.184 7.184 10 C -0.141 4.141 11 C -0.108 4.108 12 H 0.105 0.895 13 C 0.085 3.915 14 O -0.573 6.573 15 C -0.147 4.147 16 N -0.535 5.535 17 C 0.018 3.982 18 C -0.044 4.044 19 O -0.519 6.519 20 Si 0.664 3.336 21 C -0.172 4.172 22 H 0.070 0.930 23 H 0.064 0.936 24 H 0.080 0.920 25 H 0.397 0.603 26 H 0.085 0.915 27 H 0.092 0.908 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.051 0.949 31 H 0.050 0.950 32 H 0.382 0.618 33 H 0.103 0.897 34 H 0.084 0.916 35 H 0.411 0.589 36 H 0.133 0.867 37 H 0.378 0.622 38 H -0.254 1.254 39 H -0.243 1.243 40 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.390 3.419 0.478 3.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.075 4.075 3 C -0.165 4.165 4 C 0.381 3.619 5 O -0.395 6.395 6 N -0.384 5.384 7 C -0.008 4.008 8 C 0.060 3.940 9 F -0.164 7.164 10 C -0.179 4.179 11 C -0.127 4.127 12 H 0.123 0.877 13 C 0.007 3.993 14 O -0.379 6.379 15 C -0.185 4.185 16 N -0.135 5.135 17 C -0.098 4.098 18 C -0.155 4.155 19 O -0.324 6.324 20 Si 0.564 3.436 21 C -0.197 4.197 22 H 0.088 0.912 23 H 0.083 0.917 24 H 0.099 0.901 25 H 0.231 0.769 26 H 0.103 0.897 27 H 0.110 0.890 28 H 0.109 0.891 29 H 0.125 0.875 30 H 0.069 0.931 31 H 0.068 0.932 32 H 0.230 0.770 33 H 0.121 0.879 34 H 0.102 0.898 35 H 0.251 0.749 36 H 0.150 0.850 37 H 0.226 0.774 38 H -0.178 1.178 39 H -0.166 1.166 40 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.642 3.062 0.009 3.475 hybrid contribution 0.445 0.228 1.335 1.425 sum 2.087 3.291 1.343 4.122 Atomic orbital electron populations 1.20394 0.88882 1.03154 1.02576 1.20043 0.96081 0.90479 1.00911 1.20108 0.83376 0.93304 1.19740 1.16992 0.85707 0.82908 0.76290 1.90849 1.15785 1.83121 1.49775 1.45715 1.09714 1.06013 1.76987 1.21817 0.95118 0.79360 1.04550 1.22091 0.87616 0.95879 0.88446 1.92878 1.66010 1.93037 1.64481 1.23548 1.00015 0.92995 1.01357 1.22505 0.99994 0.94284 0.95867 0.87658 1.22144 0.87351 0.97946 0.91831 1.86485 1.36402 1.68557 1.46476 1.23719 1.02598 0.96970 0.95176 1.42004 1.07103 1.06447 1.57996 1.20815 0.97703 0.82593 1.08712 1.24470 1.00755 0.98185 0.92095 1.86668 1.95354 1.34864 1.15555 0.95704 0.77496 0.82025 0.88410 1.20641 0.90488 0.99136 1.09447 0.91151 0.91685 0.90082 0.76895 0.89679 0.88996 0.89057 0.87518 0.93070 0.93201 0.77029 0.87907 0.89775 0.74937 0.84970 0.77398 1.17832 1.16601 0.83480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.20 9.83 36.01 0.35 0.16 16 2 C -0.07 -0.17 6.21 -104.16 -0.65 -0.81 16 3 C -0.05 -0.09 7.06 -81.98 -0.58 -0.67 16 4 C 0.59 1.40 7.79 -12.85 -0.10 1.30 16 5 O -0.52 -2.79 14.80 5.20 0.08 -2.71 16 6 N -0.73 0.32 5.46 -61.62 -0.34 -0.02 16 7 C 0.12 -0.14 5.37 -4.04 -0.02 -0.16 16 8 C 0.08 -0.14 1.67 -89.80 -0.15 -0.29 16 9 F -0.18 -0.04 16.80 2.25 0.04 -0.01 16 10 C -0.14 0.41 7.10 -25.92 -0.18 0.22 16 11 C -0.11 0.19 3.99 -89.82 -0.36 -0.17 16 12 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 13 C 0.09 -0.18 6.89 37.16 0.26 0.08 16 14 O -0.57 0.19 13.66 -35.23 -0.48 -0.29 16 15 C -0.15 0.31 7.08 -25.93 -0.18 0.13 16 16 N -0.53 0.42 5.47 -5.69 -0.03 0.39 16 17 C 0.02 0.00 6.12 -81.95 -0.50 -0.50 16 18 C -0.04 0.06 2.98 36.01 0.11 0.17 16 19 O -0.52 -0.06 12.87 -35.23 -0.45 -0.51 16 20 Si 0.66 -1.66 30.96 -169.99 -5.26 -6.93 16 21 C -0.17 -0.25 10.64 -39.98 -0.43 -0.67 16 22 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 23 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 24 H 0.08 0.28 6.48 -51.93 -0.34 -0.06 16 25 H 0.40 -0.90 7.31 -40.82 -0.30 -1.20 16 26 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 27 H 0.09 -0.15 7.94 -51.93 -0.41 -0.56 16 28 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.11 -0.47 8.06 -51.93 -0.42 -0.89 16 30 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.05 -0.16 7.85 -51.93 -0.41 -0.57 16 32 H 0.38 -1.68 9.12 45.56 0.42 -1.26 16 33 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 34 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.41 -1.36 5.98 -40.82 -0.24 -1.60 16 36 H 0.13 -0.30 7.96 -51.93 -0.41 -0.71 16 37 H 0.38 -0.98 8.70 45.56 0.40 -0.58 16 38 H -0.25 0.24 7.11 56.52 0.40 0.64 16 39 H -0.24 -0.22 7.11 56.52 0.40 0.19 16 40 H 0.15 0.11 8.06 -52.49 -0.42 -0.32 16 LS Contribution 339.10 15.07 5.11 5.11 Total: 0.00 -8.72 339.10 -8.47 -17.19 By element: Atomic # 1 Polarization: -6.30 SS G_CDS: -4.70 Total: -11.00 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -2.43 Total: -1.23 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.37 Total: 0.37 kcal Atomic # 8 Polarization: -2.66 SS G_CDS: -0.86 Total: -3.51 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.04 Total: -0.01 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.26 Total: -6.93 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.72 -8.47 -17.19 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_13940406.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.485 kcal (2) G-P(sol) polarization free energy of solvation -8.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.204 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.471 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.190 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds