Wall clock time and date at job start Sun Mar 7 2021 08:58:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.47026 * 2 1 4 4 C 1.50698 * 109.47006 * 120.00203 * 2 1 3 5 5 C 1.34858 * 125.89066 * 244.97305 * 4 2 1 6 6 C 1.40881 * 107.41801 * 180.02562 * 5 4 2 7 7 C 1.34858 * 107.42006 * 0.02562 * 6 5 4 8 8 C 1.50690 * 125.89043 * 180.02562 * 7 6 5 9 9 C 1.50694 * 109.47523 * 85.02558 * 8 7 6 10 10 O 1.21283 * 119.99814 * 359.97438 * 9 8 7 11 11 N 1.34779 * 120.00580 * 179.97438 * 9 8 7 12 12 C 1.46495 * 120.00271 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47094 * 180.02562 * 12 11 9 14 14 F 1.39898 * 112.90722 * 48.74764 * 13 12 11 15 15 C 1.53781 * 113.61480 * 180.02562 * 13 12 11 16 16 C 1.53786 * 87.17350 * 139.93948 * 15 13 12 17 17 H 1.08993 * 113.61491 * 89.15923 * 16 15 13 18 18 C 1.52999 * 113.61361 * 220.06273 * 16 15 13 19 19 O 1.42904 * 109.47219 * 184.99801 * 18 16 15 20 20 C 1.53782 * 113.61259 * 277.49847 * 13 12 11 21 21 N 1.36342 * 125.89103 * 65.30839 * 4 2 1 22 22 H 0.96697 * 114.00045 * 299.99715 * 1 2 3 23 23 H 1.08999 * 109.47101 * 240.00021 * 2 1 3 24 24 H 1.48499 * 110.00399 * 300.00284 * 3 2 1 25 25 H 1.48507 * 109.99968 * 61.31959 * 3 2 1 26 26 H 1.08003 * 126.28651 * 0.04797 * 5 4 2 27 27 H 1.07999 * 126.28914 * 179.97438 * 6 5 4 28 28 H 1.09000 * 109.47380 * 325.01934 * 8 7 6 29 29 H 1.09004 * 109.46825 * 205.02139 * 8 7 6 30 30 H 0.97001 * 119.99591 * 359.97438 * 11 9 8 31 31 H 1.08997 * 109.47405 * 60.00440 * 12 11 9 32 32 H 1.08999 * 109.47413 * 299.99631 * 12 11 9 33 33 H 1.09002 * 113.61445 * 254.52948 * 15 13 12 34 34 H 1.09002 * 113.61408 * 25.34678 * 15 13 12 35 35 H 1.09002 * 109.47053 * 305.00261 * 18 16 15 36 36 H 1.09004 * 109.47121 * 64.99898 * 18 16 15 37 37 H 0.96699 * 113.99884 * 179.97438 * 19 18 16 38 38 H 1.08997 * 113.61668 * 334.56352 * 20 13 12 39 39 H 1.08994 * 113.61387 * 105.47087 * 20 13 12 40 40 H 0.96994 * 125.64166 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6306 -0.1488 2.2375 6 6 2.8985 -1.1606 3.1805 7 6 2.3532 -2.3023 2.7136 8 6 2.3937 -3.6447 3.3970 9 6 1.2614 -3.7388 4.3870 10 8 0.4971 -2.8072 4.5244 11 7 1.0981 -4.8582 5.1197 12 6 -0.0023 -4.9494 6.0825 13 6 0.0388 -6.3124 6.7763 14 9 1.3110 -6.6409 7.2565 15 6 -1.0810 -6.5107 7.8115 16 6 -1.2010 -7.9535 7.2926 17 1 -0.5495 -8.6586 7.8086 18 6 -2.6450 -8.4472 7.1831 19 8 -2.6498 -9.8259 6.8070 20 6 -0.6221 -7.4378 5.9629 21 7 1.7627 -2.0333 1.5144 22 1 -0.3933 0.4416 0.7650 23 1 1.7924 -0.5138 -0.8900 24 1 1.5615 2.4680 -1.2084 25 1 1.5879 2.4586 1.2243 26 1 2.9299 0.8865 2.3083 27 1 3.4415 -1.0437 4.1067 28 1 3.3436 -3.7579 3.9195 29 1 2.2921 -4.4345 2.6527 30 1 1.7092 -5.6034 5.0095 31 1 -0.9523 -4.8356 5.5604 32 1 0.1000 -4.1600 6.8271 33 1 -0.7378 -6.4452 8.8439 34 1 -1.9653 -5.9029 7.6200 35 1 -3.1426 -8.3315 8.1459 36 1 -3.1725 -7.8631 6.4290 37 1 -3.5344 -10.2065 6.7189 38 1 -1.3816 -7.0844 5.2655 39 1 0.0916 -8.1209 5.5026 40 1 1.2977 -2.6763 0.9567 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:51 Heat of formation + Delta-G solvation = -96.271143 kcal Electronic energy + Delta-G solvation = -23871.527300 eV Core-core repulsion = 19989.824301 eV Total energy + Delta-G solvation = -3881.702999 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -48.90591 -42.28215 -40.62121 -39.84355 -37.76024 -37.30807 -35.57284 -33.23659 -31.85612 -30.60365 -29.21435 -27.31854 -27.03904 -25.01726 -22.44234 -21.92241 -21.28676 -21.03129 -20.75284 -19.02342 -18.41877 -18.35092 -17.63549 -17.10243 -16.92130 -16.50846 -16.43866 -16.28170 -16.20515 -15.58229 -15.28905 -15.10007 -14.79298 -14.54514 -14.50758 -14.14766 -14.00072 -13.85184 -13.72643 -13.65442 -13.43520 -13.30581 -12.80603 -12.50282 -12.09902 -12.03453 -11.72402 -11.63390 -11.46280 -11.01781 -10.91363 -10.74087 -10.21860 -9.70821 -8.90382 -4.86752 1.13564 1.32146 1.59491 1.71877 1.85818 1.99792 2.23060 2.50097 2.86179 2.97134 3.02900 3.19438 3.37101 3.40781 3.61398 3.63999 3.85630 3.93526 3.99673 4.10082 4.17261 4.29478 4.35842 4.37769 4.38543 4.45747 4.49932 4.51356 4.60736 4.67554 4.76102 4.81505 4.84163 5.17475 5.27497 5.33251 5.37076 6.05763 6.20448 6.34157 6.42402 6.55274 6.66767 7.15029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.055 4.055 3 Si 0.715 3.285 4 C -0.008 4.008 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.071 4.071 9 C 0.513 3.487 10 O -0.523 6.523 11 N -0.731 5.731 12 C 0.114 3.886 13 C 0.080 3.920 14 F -0.183 7.183 15 C -0.143 4.143 16 C -0.109 4.109 17 H 0.105 0.895 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.146 4.146 21 N -0.536 5.536 22 H 0.380 0.620 23 H 0.114 0.886 24 H -0.258 1.258 25 H -0.257 1.257 26 H 0.141 0.859 27 H 0.137 0.863 28 H 0.119 0.881 29 H 0.101 0.899 30 H 0.405 0.595 31 H 0.088 0.912 32 H 0.081 0.919 33 H 0.090 0.910 34 H 0.105 0.895 35 H 0.051 0.949 36 H 0.049 0.951 37 H 0.382 0.618 38 H 0.101 0.899 39 H 0.085 0.915 40 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.691 -3.094 0.208 3.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.165 4.165 3 Si 0.615 3.385 4 C -0.121 4.121 5 C -0.212 4.212 6 C -0.197 4.197 7 C -0.077 4.077 8 C -0.112 4.112 9 C 0.298 3.702 10 O -0.398 6.398 11 N -0.385 5.385 12 C -0.010 4.010 13 C 0.062 3.938 14 F -0.164 7.164 15 C -0.181 4.181 16 C -0.127 4.127 17 H 0.124 0.876 18 C 0.008 3.992 19 O -0.379 6.379 20 C -0.183 4.183 21 N -0.130 5.130 22 H 0.228 0.772 23 H 0.132 0.868 24 H -0.184 1.184 25 H -0.181 1.181 26 H 0.159 0.841 27 H 0.154 0.846 28 H 0.137 0.863 29 H 0.119 0.881 30 H 0.240 0.760 31 H 0.106 0.894 32 H 0.099 0.901 33 H 0.109 0.891 34 H 0.124 0.876 35 H 0.069 0.931 36 H 0.067 0.933 37 H 0.230 0.770 38 H 0.119 0.881 39 H 0.104 0.896 40 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 0.601 -1.887 -0.309 2.005 hybrid contribution -1.525 -1.130 0.441 1.948 sum -0.923 -3.017 0.132 3.158 Atomic orbital electron populations 1.86564 1.17931 1.80261 1.49601 1.24773 0.83798 1.11482 0.96438 0.94388 0.91431 0.72534 0.80159 1.20780 1.07063 0.84344 0.99963 1.20675 1.05394 0.99657 0.95425 1.20599 1.06564 0.91661 1.00893 1.19468 1.03734 0.95818 0.88714 1.20118 0.99167 0.94480 0.97427 1.20625 0.86179 0.81943 0.81413 1.90774 1.45157 1.37113 1.66727 1.45840 1.32518 1.18607 1.41485 1.21764 0.91561 0.95566 0.92094 1.22052 0.80227 0.94898 0.96654 1.92882 1.40695 1.93622 1.89171 1.23552 0.98218 0.96444 0.99854 1.22534 0.96833 0.96083 0.97233 0.87644 1.22140 0.95770 0.82548 0.98787 1.86487 1.34099 1.24945 1.92369 1.23732 1.00734 0.96673 0.97209 1.41799 1.44282 1.09085 1.17863 0.77229 0.86844 1.18351 1.18147 0.84121 0.84554 0.86282 0.88111 0.76048 0.89416 0.90083 0.89134 0.87650 0.93106 0.93250 0.77040 0.88057 0.89643 0.75138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.20 12.88 -35.23 -0.45 -1.66 16 2 C -0.06 -0.03 3.08 36.00 0.11 0.08 16 3 Si 0.72 -0.23 30.60 -169.99 -5.20 -5.43 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.40 9.37 -39.78 -0.37 -0.77 16 6 C -0.17 -0.42 10.76 -39.78 -0.43 -0.85 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 8 C -0.07 0.11 6.24 -29.04 -0.18 -0.08 16 9 C 0.51 0.56 7.82 -10.99 -0.09 0.47 16 10 O -0.52 -2.95 16.03 5.56 0.09 -2.86 16 11 N -0.73 0.78 5.47 -60.30 -0.33 0.45 16 12 C 0.11 -0.11 5.37 -4.04 -0.02 -0.13 16 13 C 0.08 -0.12 1.67 -89.80 -0.15 -0.27 16 14 F -0.18 -0.13 16.80 2.25 0.04 -0.09 16 15 C -0.14 0.34 7.09 -25.92 -0.18 0.16 16 16 C -0.11 0.15 4.00 -89.73 -0.36 -0.21 16 17 H 0.11 0.00 8.14 -51.93 -0.42 -0.42 16 18 C 0.09 -0.15 6.89 37.16 0.26 0.10 16 19 O -0.57 0.07 13.66 -35.23 -0.48 -0.42 16 20 C -0.15 0.28 7.08 -25.84 -0.18 0.09 16 21 N -0.54 -0.66 6.07 -5.44 -0.03 -0.69 16 22 H 0.38 0.06 8.70 45.56 0.40 0.46 16 23 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 24 H -0.26 -0.67 7.11 56.52 0.40 -0.27 16 25 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 26 H 0.14 0.08 6.24 -52.48 -0.33 -0.25 16 27 H 0.14 0.19 8.06 -52.49 -0.42 -0.24 16 28 H 0.12 -0.41 8.14 -51.93 -0.42 -0.84 16 29 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 30 H 0.40 -1.22 8.19 -40.82 -0.33 -1.56 16 31 H 0.09 -0.09 7.94 -51.93 -0.41 -0.51 16 32 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 34 H 0.11 -0.40 8.06 -51.93 -0.42 -0.82 16 35 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.05 -0.14 7.84 -51.93 -0.41 -0.55 16 37 H 0.38 -1.61 9.12 45.56 0.42 -1.20 16 38 H 0.10 -0.27 7.72 -51.93 -0.40 -0.68 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.41 -0.19 8.96 -40.82 -0.37 -0.56 16 LS Contribution 343.03 15.07 5.17 5.17 Total: 0.00 -10.21 343.03 -8.64 -18.85 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -4.85 Total: -10.97 kcal Atomic # 6 Polarization: 0.24 SS G_CDS: -2.59 Total: -2.36 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.36 Total: -0.24 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -0.85 Total: -4.93 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.04 Total: -0.09 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.20 Total: -5.43 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -10.21 -8.64 -18.85 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.420 kcal (2) G-P(sol) polarization free energy of solvation -10.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.851 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.271 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds