Wall clock time and date at job start Sun Mar 7 2021 08:58:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.47026 * 2 1 4 4 C 1.50698 * 109.47006 * 120.00203 * 2 1 3 5 5 C 1.34858 * 125.89066 * 244.97305 * 4 2 1 6 6 C 1.40881 * 107.41801 * 180.02562 * 5 4 2 7 7 C 1.34858 * 107.42006 * 0.02562 * 6 5 4 8 8 C 1.50690 * 125.89043 * 180.02562 * 7 6 5 9 9 C 1.50694 * 109.47523 * 85.02558 * 8 7 6 10 10 O 1.21283 * 119.99814 * 359.97438 * 9 8 7 11 11 N 1.34779 * 120.00580 * 179.97438 * 9 8 7 12 12 C 1.46495 * 120.00271 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47094 * 180.02562 * 12 11 9 14 14 F 1.39898 * 112.90722 * 48.74764 * 13 12 11 15 15 C 1.53781 * 113.61480 * 180.02562 * 13 12 11 16 16 C 1.53786 * 87.17350 * 139.93948 * 15 13 12 17 17 H 1.08993 * 113.61491 * 89.15923 * 16 15 13 18 18 C 1.52999 * 113.61361 * 220.06273 * 16 15 13 19 19 O 1.42904 * 109.47219 * 184.99801 * 18 16 15 20 20 C 1.53782 * 113.61259 * 277.49847 * 13 12 11 21 21 N 1.36342 * 125.89103 * 65.30839 * 4 2 1 22 22 H 0.96697 * 114.00045 * 299.99715 * 1 2 3 23 23 H 1.08999 * 109.47101 * 240.00021 * 2 1 3 24 24 H 1.48499 * 110.00399 * 300.00284 * 3 2 1 25 25 H 1.48507 * 109.99968 * 61.31959 * 3 2 1 26 26 H 1.08003 * 126.28651 * 0.04797 * 5 4 2 27 27 H 1.07999 * 126.28914 * 179.97438 * 6 5 4 28 28 H 1.09000 * 109.47380 * 325.01934 * 8 7 6 29 29 H 1.09004 * 109.46825 * 205.02139 * 8 7 6 30 30 H 0.97001 * 119.99591 * 359.97438 * 11 9 8 31 31 H 1.08997 * 109.47405 * 60.00440 * 12 11 9 32 32 H 1.08999 * 109.47413 * 299.99631 * 12 11 9 33 33 H 1.09002 * 113.61445 * 254.52948 * 15 13 12 34 34 H 1.09002 * 113.61408 * 25.34678 * 15 13 12 35 35 H 1.09002 * 109.47053 * 305.00261 * 18 16 15 36 36 H 1.09004 * 109.47121 * 64.99898 * 18 16 15 37 37 H 0.96699 * 113.99884 * 179.97438 * 19 18 16 38 38 H 1.08997 * 113.61668 * 334.56352 * 20 13 12 39 39 H 1.08994 * 113.61387 * 105.47087 * 20 13 12 40 40 H 0.96994 * 125.64166 * 359.97438 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6306 -0.1488 2.2375 6 6 2.8985 -1.1606 3.1805 7 6 2.3532 -2.3023 2.7136 8 6 2.3937 -3.6447 3.3970 9 6 1.2614 -3.7388 4.3870 10 8 0.4971 -2.8072 4.5244 11 7 1.0981 -4.8582 5.1197 12 6 -0.0023 -4.9494 6.0825 13 6 0.0388 -6.3124 6.7763 14 9 1.3110 -6.6409 7.2565 15 6 -1.0810 -6.5107 7.8115 16 6 -1.2010 -7.9535 7.2926 17 1 -0.5495 -8.6586 7.8086 18 6 -2.6450 -8.4472 7.1831 19 8 -2.6498 -9.8259 6.8070 20 6 -0.6221 -7.4378 5.9629 21 7 1.7627 -2.0333 1.5144 22 1 -0.3933 0.4416 0.7650 23 1 1.7924 -0.5138 -0.8900 24 1 1.5615 2.4680 -1.2084 25 1 1.5879 2.4586 1.2243 26 1 2.9299 0.8865 2.3083 27 1 3.4415 -1.0437 4.1067 28 1 3.3436 -3.7579 3.9195 29 1 2.2921 -4.4345 2.6527 30 1 1.7092 -5.6034 5.0095 31 1 -0.9523 -4.8356 5.5604 32 1 0.1000 -4.1600 6.8271 33 1 -0.7378 -6.4452 8.8439 34 1 -1.9653 -5.9029 7.6200 35 1 -3.1426 -8.3315 8.1459 36 1 -3.1725 -7.8631 6.4290 37 1 -3.5344 -10.2065 6.7189 38 1 -1.3816 -7.0844 5.2655 39 1 0.0916 -8.1209 5.5026 40 1 1.2977 -2.6763 0.9567 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:50 Heat of formation + Delta-G solvation = -101.397737 kcal Electronic energy + Delta-G solvation = -23871.749606 eV Core-core repulsion = 19989.824301 eV Total energy + Delta-G solvation = -3881.925305 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.137 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.88872 -42.34300 -40.66307 -39.76017 -37.86711 -37.21424 -35.60850 -33.23937 -31.94043 -30.57750 -29.18806 -27.19282 -26.91336 -25.05452 -22.35755 -21.95699 -21.36884 -21.05599 -20.66417 -19.09708 -18.34905 -18.29692 -17.63446 -17.05158 -16.91528 -16.49640 -16.42369 -16.25467 -16.21277 -15.56354 -15.34597 -15.02843 -14.80783 -14.62330 -14.44943 -14.20418 -14.05527 -13.85224 -13.80186 -13.49373 -13.41005 -13.22388 -12.78679 -12.39781 -12.19618 -11.91273 -11.85205 -11.54019 -11.35038 -11.04364 -10.83731 -10.82161 -10.23920 -9.80781 -8.98494 -4.87499 1.07381 1.29525 1.55338 1.67701 1.81227 1.93967 2.21491 2.48625 3.02333 3.10548 3.14449 3.32736 3.37783 3.51088 3.66261 3.79846 3.80892 4.01496 4.16963 4.23012 4.32822 4.41975 4.43098 4.49554 4.54288 4.57842 4.60549 4.61616 4.68954 4.79572 4.82354 4.89463 4.96097 5.24518 5.25232 5.28102 5.36531 5.97518 6.11833 6.38447 6.39697 6.66250 6.86044 7.14811 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.062 4.062 3 Si 0.799 3.201 4 C -0.016 4.016 5 C -0.202 4.202 6 C -0.200 4.200 7 C 0.034 3.966 8 C -0.067 4.067 9 C 0.513 3.487 10 O -0.575 6.575 11 N -0.720 5.720 12 C 0.115 3.885 13 C 0.081 3.919 14 F -0.197 7.197 15 C -0.136 4.136 16 C -0.114 4.114 17 H 0.086 0.914 18 C 0.083 3.917 19 O -0.598 6.598 20 C -0.140 4.140 21 N -0.536 5.536 22 H 0.386 0.614 23 H 0.127 0.873 24 H -0.297 1.297 25 H -0.290 1.290 26 H 0.149 0.851 27 H 0.140 0.860 28 H 0.143 0.857 29 H 0.130 0.870 30 H 0.416 0.584 31 H 0.092 0.908 32 H 0.069 0.931 33 H 0.088 0.912 34 H 0.123 0.877 35 H 0.058 0.942 36 H 0.064 0.936 37 H 0.397 0.603 38 H 0.113 0.887 39 H 0.080 0.920 40 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.771 -3.922 -0.142 3.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.171 4.171 3 Si 0.703 3.297 4 C -0.129 4.129 5 C -0.227 4.227 6 C -0.225 4.225 7 C -0.080 4.080 8 C -0.107 4.107 9 C 0.300 3.700 10 O -0.453 6.453 11 N -0.373 5.373 12 C -0.009 4.009 13 C 0.063 3.937 14 F -0.178 7.178 15 C -0.174 4.174 16 C -0.132 4.132 17 H 0.105 0.895 18 C 0.006 3.994 19 O -0.407 6.407 20 C -0.177 4.177 21 N -0.131 5.131 22 H 0.235 0.765 23 H 0.145 0.855 24 H -0.224 1.224 25 H -0.217 1.217 26 H 0.167 0.833 27 H 0.157 0.843 28 H 0.160 0.840 29 H 0.148 0.852 30 H 0.253 0.747 31 H 0.110 0.890 32 H 0.087 0.913 33 H 0.106 0.894 34 H 0.141 0.859 35 H 0.076 0.924 36 H 0.082 0.918 37 H 0.247 0.753 38 H 0.131 0.869 39 H 0.098 0.902 40 H 0.257 0.743 Dipole moment (debyes) X Y Z Total from point charges 0.696 -2.780 -0.654 2.939 hybrid contribution -1.580 -0.894 0.583 1.907 sum -0.885 -3.674 -0.071 3.780 Atomic orbital electron populations 1.86536 1.18883 1.80596 1.50166 1.25001 0.83096 1.12309 0.96672 0.93389 0.90077 0.70179 0.76083 1.20904 1.07127 0.84703 1.00208 1.20910 1.05836 1.00233 0.95713 1.20852 1.07728 0.92460 1.01451 1.19868 1.02735 0.96803 0.88599 1.20237 0.99089 0.93887 0.97501 1.21034 0.86047 0.81469 0.81435 1.90756 1.47196 1.38916 1.68466 1.45786 1.32429 1.18423 1.40667 1.21752 0.91817 0.95443 0.91893 1.22106 0.79819 0.94641 0.97171 1.92853 1.41784 1.93718 1.89408 1.23573 0.98426 0.95982 0.99451 1.22511 0.97031 0.96220 0.97477 0.89518 1.22226 0.95483 0.82061 0.99652 1.86440 1.35829 1.25913 1.92510 1.23726 1.00741 0.96158 0.97123 1.41884 1.44093 1.09139 1.18004 0.76516 0.85513 1.22445 1.21719 0.83330 0.84250 0.83964 0.85167 0.74732 0.88991 0.91287 0.89361 0.85878 0.92374 0.91832 0.75281 0.86854 0.90173 0.74299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.67 12.88 -148.98 -1.92 -4.59 16 2 C -0.06 -0.08 3.08 71.24 0.22 0.14 16 3 Si 0.80 -0.16 30.60 68.60 2.10 1.94 16 4 C -0.02 -0.06 6.50 41.08 0.27 0.21 16 5 C -0.20 -0.98 9.37 22.14 0.21 -0.77 16 6 C -0.20 -1.09 10.76 22.14 0.24 -0.85 16 7 C 0.03 0.09 5.66 41.08 0.23 0.32 16 8 C -0.07 0.27 6.24 29.10 0.18 0.46 16 9 C 0.51 0.99 7.82 87.65 0.69 1.67 16 10 O -0.57 -6.91 16.03 -3.04 -0.05 -6.96 16 11 N -0.72 1.88 5.47 -463.07 -2.53 -0.65 16 12 C 0.12 -0.22 5.37 86.38 0.46 0.24 16 13 C 0.08 -0.26 1.67 -10.27 -0.02 -0.27 16 14 F -0.20 -0.32 16.80 44.97 0.76 0.44 16 15 C -0.14 0.70 7.09 31.12 0.22 0.92 16 16 C -0.11 0.32 4.00 -10.22 -0.04 0.28 16 17 H 0.09 0.08 8.14 -2.39 -0.02 0.06 16 18 C 0.08 -0.35 6.89 71.98 0.50 0.15 16 19 O -0.60 0.25 13.66 -148.98 -2.04 -1.79 16 20 C -0.14 0.59 7.08 31.17 0.22 0.81 16 21 N -0.54 -1.23 6.07 -171.12 -1.04 -2.27 16 22 H 0.39 0.43 8.70 -74.06 -0.64 -0.21 16 23 H 0.13 -0.21 7.96 -2.39 -0.02 -0.23 16 24 H -0.30 -1.82 7.11 99.48 0.71 -1.12 16 25 H -0.29 -1.52 7.11 99.48 0.71 -0.81 16 26 H 0.15 0.28 6.24 -2.91 -0.02 0.26 16 27 H 0.14 0.50 8.06 -2.91 -0.02 0.48 16 28 H 0.14 -1.24 8.14 -2.39 -0.02 -1.26 16 29 H 0.13 -1.30 8.14 -2.39 -0.02 -1.32 16 30 H 0.42 -2.91 8.19 -92.71 -0.76 -3.67 16 31 H 0.09 -0.23 7.94 -2.39 -0.02 -0.24 16 32 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 33 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 34 H 0.12 -1.07 8.06 -2.39 -0.02 -1.09 16 35 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 36 H 0.06 -0.45 7.84 -2.38 -0.02 -0.47 16 37 H 0.40 -3.46 9.12 -74.06 -0.68 -4.14 16 38 H 0.11 -0.75 7.72 -2.39 -0.02 -0.76 16 39 H 0.08 -0.24 8.14 -2.39 -0.02 -0.25 16 40 H 0.42 -0.58 8.96 -92.71 -0.83 -1.41 16 Total: 0.00 -24.36 343.03 -3.11 -27.47 By element: Atomic # 1 Polarization: -15.14 SS G_CDS: -1.77 Total: -16.91 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: 3.37 Total: 3.32 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -3.57 Total: -2.92 kcal Atomic # 8 Polarization: -9.33 SS G_CDS: -4.00 Total: -13.33 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.76 Total: 0.44 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: 2.10 Total: 1.94 kcal Total: -24.36 -3.11 -27.47 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.928 kcal (2) G-P(sol) polarization free energy of solvation -24.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.112 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.398 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds