Wall clock time and date at job start Sun Mar 7 2021 08:58:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86302 * 109.47047 * 2 1 4 4 C 1.50698 * 109.47231 * 239.99589 * 2 1 3 5 5 C 1.31116 * 118.54687 * 119.73257 * 4 2 1 6 6 N 1.38919 * 121.85149 * 180.68634 * 5 4 2 7 7 C 1.47033 * 118.88103 * 346.68468 * 6 5 4 8 8 C 1.50701 * 109.82070 * 163.20383 * 7 6 5 9 9 O 1.21280 * 119.99966 * 341.79288 * 8 7 6 10 10 N 1.34780 * 119.99844 * 161.79208 * 8 7 6 11 11 C 1.46500 * 119.99765 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.47378 * 179.97438 * 11 10 8 13 13 F 1.39898 * 112.84614 * 48.80149 * 12 11 10 14 14 C 1.53778 * 113.61596 * 180.02562 * 12 11 10 15 15 C 1.53783 * 87.07979 * 139.98029 * 14 12 11 16 16 H 1.09008 * 113.61403 * 89.19722 * 15 14 12 17 17 C 1.52995 * 113.61525 * 220.01636 * 15 14 12 18 18 O 1.42891 * 109.47520 * 185.00158 * 17 15 14 19 19 C 1.53777 * 113.61402 * 277.50188 * 12 11 10 20 20 C 1.53539 * 107.65983 * 43.66500 * 7 6 5 21 21 C 1.50206 * 118.54841 * 300.00266 * 4 2 1 22 22 H 0.96692 * 113.99816 * 60.00495 * 1 2 3 23 23 H 1.09001 * 109.46839 * 119.99447 * 2 1 3 24 24 H 1.48506 * 109.99817 * 298.67571 * 3 2 1 25 25 H 1.48497 * 110.00146 * 59.99759 * 3 2 1 26 26 H 1.08006 * 119.07408 * 0.66267 * 5 4 2 27 27 H 0.97002 * 120.56106 * 166.66263 * 6 5 4 28 28 H 1.08996 * 109.87394 * 284.09619 * 7 6 5 29 29 H 0.96999 * 120.00037 * 0.02562 * 10 8 7 30 30 H 1.09002 * 109.47130 * 300.00300 * 11 10 8 31 31 H 1.09003 * 109.47532 * 59.99970 * 11 10 8 32 32 H 1.09008 * 113.60989 * 254.52746 * 14 12 11 33 33 H 1.08994 * 113.61589 * 25.34651 * 14 12 11 34 34 H 1.09004 * 109.46814 * 305.00247 * 17 15 14 35 35 H 1.08998 * 109.46960 * 64.99840 * 17 15 14 36 36 H 0.96701 * 114.00605 * 180.02562 * 18 17 15 37 37 H 1.09004 * 113.61167 * 334.56005 * 19 12 11 38 38 H 1.08997 * 113.62244 * 105.46780 * 19 12 11 39 39 H 1.08998 * 109.62209 * 179.32700 * 20 7 6 40 40 H 1.09001 * 109.61973 * 58.77162 * 20 7 6 41 41 H 1.09001 * 109.32367 * 279.92561 * 21 4 2 42 42 H 1.08997 * 109.32680 * 39.57888 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.6788 -0.0446 -2.0772 6 7 3.1670 -0.6275 -3.2398 7 6 3.0923 -2.0885 -3.3872 8 6 3.2797 -2.4664 -4.8340 9 8 3.1297 -1.6334 -5.7026 10 7 3.6140 -3.7301 -5.1626 11 6 3.7956 -4.0975 -6.5690 12 6 4.1693 -5.5781 -6.6653 13 9 3.3241 -6.4016 -5.9139 14 6 4.3840 -6.0668 -8.1074 15 6 5.5715 -6.8831 -7.5705 16 1 5.2974 -7.8830 -7.2338 17 6 6.7866 -6.8816 -8.5002 18 8 7.7887 -7.7549 -7.9759 19 6 5.6647 -5.8522 -6.4338 20 6 1.7034 -2.5346 -2.9083 21 6 1.5487 -2.1484 -1.4355 22 1 -0.3933 0.4416 -0.7650 23 1 1.7923 -0.5138 0.8901 24 1 1.5880 2.4585 -1.2244 25 1 1.5615 2.4679 1.2084 26 1 2.9215 0.9863 -1.8650 27 1 3.5504 -0.0799 -3.9427 28 1 3.8627 -2.5622 -2.7789 29 1 3.7336 -4.3963 -4.4678 30 1 2.8681 -3.9204 -7.1135 31 1 4.5924 -3.4932 -7.0026 32 1 3.5673 -6.6814 -8.4862 33 1 4.6735 -5.2750 -8.7982 34 1 6.4869 -7.2253 -9.4902 35 1 7.1874 -5.8706 -8.5725 36 1 8.5898 -7.8032 -8.5153 37 1 6.3056 -5.0019 -6.6671 38 1 5.8824 -6.2934 -5.4612 39 1 1.6089 -3.6151 -3.0152 40 1 0.9350 -2.0369 -3.4999 41 1 2.1922 -2.7834 -0.8265 42 1 0.5110 -2.2919 -1.1346 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_15413834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:53 Heat of formation + Delta-G solvation = -122.875539 kcal Electronic energy + Delta-G solvation = -24853.867242 eV Core-core repulsion = 20943.699112 eV Total energy + Delta-G solvation = -3910.168131 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.152 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.87932 -41.42764 -39.97381 -39.45029 -37.53758 -37.17755 -35.73280 -33.19492 -33.14748 -30.38859 -27.97881 -27.05828 -26.53988 -25.28825 -23.67482 -22.26979 -21.79603 -20.68508 -19.46610 -19.21893 -18.27833 -18.16355 -17.53820 -17.04822 -17.00312 -16.47622 -16.41306 -16.25299 -16.01406 -15.72743 -15.52949 -15.28977 -15.08243 -14.84775 -14.47524 -14.32568 -14.02576 -13.93981 -13.69841 -13.41702 -13.19948 -13.16100 -12.90933 -12.38521 -12.36933 -11.92196 -11.89598 -11.75132 -11.50807 -11.33702 -11.25971 -10.94046 -10.80568 -10.36760 -10.30030 -8.46216 -4.91052 1.29597 1.36663 1.49155 1.59526 1.78529 2.00330 2.60394 3.03309 3.11521 3.14195 3.34268 3.46545 3.54111 3.60559 3.74888 3.82474 3.87191 4.03677 4.23028 4.31836 4.35058 4.43538 4.44751 4.54105 4.59611 4.60499 4.63196 4.67970 4.71228 4.78777 4.84403 4.91226 4.98218 5.04083 5.16878 5.20163 5.30665 5.37600 5.56348 6.18098 6.36312 6.60944 6.81344 6.88739 6.99703 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.056 4.056 3 Si 0.746 3.254 4 C -0.284 4.284 5 C 0.142 3.858 6 N -0.735 5.735 7 C 0.139 3.861 8 C 0.516 3.484 9 O -0.570 6.570 10 N -0.713 5.713 11 C 0.114 3.886 12 C 0.080 3.920 13 F -0.198 7.198 14 C -0.135 4.135 15 C -0.115 4.115 16 H 0.085 0.915 17 C 0.083 3.917 18 O -0.599 6.599 19 C -0.140 4.140 20 C -0.122 4.122 21 C -0.053 4.053 22 H 0.381 0.619 23 H 0.114 0.886 24 H -0.291 1.291 25 H -0.312 1.312 26 H 0.145 0.855 27 H 0.408 0.592 28 H 0.117 0.883 29 H 0.416 0.584 30 H 0.072 0.928 31 H 0.099 0.901 32 H 0.087 0.913 33 H 0.125 0.875 34 H 0.057 0.943 35 H 0.065 0.935 36 H 0.397 0.603 37 H 0.116 0.884 38 H 0.079 0.921 39 H 0.095 0.905 40 H 0.054 0.946 41 H 0.080 0.920 42 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.048 -2.203 -2.804 7.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.167 4.167 3 Si 0.654 3.346 4 C -0.294 4.294 5 C 0.022 3.978 6 N -0.368 5.368 7 C 0.030 3.970 8 C 0.302 3.698 9 O -0.449 6.449 10 N -0.365 5.365 11 C -0.010 4.010 12 C 0.061 3.939 13 F -0.179 7.179 14 C -0.173 4.173 15 C -0.133 4.133 16 H 0.103 0.897 17 C 0.006 3.994 18 O -0.407 6.407 19 C -0.177 4.177 20 C -0.161 4.161 21 C -0.091 4.091 22 H 0.230 0.770 23 H 0.132 0.868 24 H -0.219 1.219 25 H -0.241 1.241 26 H 0.162 0.838 27 H 0.245 0.755 28 H 0.134 0.866 29 H 0.253 0.747 30 H 0.090 0.910 31 H 0.117 0.883 32 H 0.105 0.895 33 H 0.144 0.856 34 H 0.075 0.925 35 H 0.083 0.917 36 H 0.247 0.753 37 H 0.135 0.865 38 H 0.097 0.903 39 H 0.113 0.887 40 H 0.073 0.927 41 H 0.098 0.902 42 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 5.364 -1.357 -2.410 6.035 hybrid contribution -0.921 -0.196 -0.841 1.262 sum 4.443 -1.552 -3.251 5.720 Atomic orbital electron populations 1.86533 1.19732 1.80160 1.49932 1.24852 0.82613 1.09850 0.99350 0.94713 0.90912 0.73433 0.75548 1.20927 1.08560 0.98762 1.01177 1.20505 0.93609 0.97107 0.86620 1.44365 1.68296 1.04933 1.19172 1.21090 1.00251 0.83866 0.91787 1.20846 0.75438 0.82163 0.91359 1.90726 1.51820 1.50640 1.51715 1.45725 1.70328 1.11150 1.09318 1.21843 1.03321 0.92814 0.82986 1.22135 0.90319 0.87630 0.93790 1.92856 1.72965 1.74081 1.77953 1.23576 0.98389 1.00860 0.94516 1.22482 0.95003 0.99028 0.96802 0.89682 1.22231 0.87693 0.93704 0.95809 1.86439 1.30774 1.68360 1.55172 1.23708 0.93291 1.00270 1.00472 1.21834 0.94431 1.02342 0.97484 1.19946 1.01868 0.92797 0.94448 0.77027 0.86845 1.21854 1.24119 0.83791 0.75498 0.86581 0.74692 0.90983 0.88254 0.89465 0.85636 0.92460 0.91656 0.75283 0.86541 0.90258 0.88678 0.92744 0.90193 0.91454 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.65 12.54 -148.98 -1.87 -4.52 16 2 C -0.06 -0.04 2.83 71.24 0.20 0.16 16 3 Si 0.75 -0.14 29.68 68.60 2.04 1.89 16 4 C -0.28 0.04 5.45 -16.76 -0.09 -0.05 16 5 C 0.14 -0.15 9.63 83.41 0.80 0.65 16 6 N -0.73 0.35 5.47 -329.00 -1.80 -1.45 16 7 C 0.14 -0.33 3.36 44.33 0.15 -0.18 16 8 C 0.52 0.40 7.10 87.66 0.62 1.02 16 9 O -0.57 -4.95 16.06 -3.03 -0.05 -5.00 16 10 N -0.71 2.59 5.47 -463.05 -2.53 0.06 16 11 C 0.11 -0.43 5.37 86.38 0.46 0.04 16 12 C 0.08 -0.35 1.67 -10.27 -0.02 -0.37 16 13 F -0.20 -0.15 16.80 44.97 0.76 0.60 16 14 C -0.14 0.86 7.10 31.12 0.22 1.08 16 15 C -0.11 0.43 3.99 -10.28 -0.04 0.39 16 16 H 0.08 0.03 8.14 -2.38 -0.02 0.01 16 17 C 0.08 -0.42 6.88 71.98 0.50 0.07 16 18 O -0.60 0.66 13.66 -148.98 -2.03 -1.37 16 19 C -0.14 0.75 7.08 31.11 0.22 0.97 16 20 C -0.12 0.21 5.47 30.79 0.17 0.38 16 21 C -0.05 0.05 5.83 29.71 0.17 0.22 16 22 H 0.38 -0.03 8.70 -74.06 -0.64 -0.67 16 23 H 0.11 -0.05 7.96 -2.39 -0.02 -0.07 16 24 H -0.29 -1.23 7.10 99.48 0.71 -0.52 16 25 H -0.31 -2.64 7.11 99.48 0.71 -1.93 16 26 H 0.15 -0.58 4.37 -2.91 -0.01 -0.59 16 27 H 0.41 0.05 8.08 -92.71 -0.75 -0.70 16 28 H 0.12 -0.79 8.14 -2.39 -0.02 -0.81 16 29 H 0.42 -3.02 8.18 -92.71 -0.76 -3.78 16 30 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 31 H 0.10 -0.51 7.94 -2.39 -0.02 -0.53 16 32 H 0.09 -0.47 8.14 -2.38 -0.02 -0.49 16 33 H 0.13 -1.30 8.06 -2.39 -0.02 -1.32 16 34 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 35 H 0.07 -0.54 7.84 -2.39 -0.02 -0.56 16 36 H 0.40 -3.72 9.12 -74.06 -0.68 -4.40 16 37 H 0.12 -0.95 7.71 -2.38 -0.02 -0.97 16 38 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 39 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 40 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 41 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 42 H 0.07 0.12 7.82 -2.39 -0.02 0.10 16 Total: 0.00 -20.24 344.69 -3.84 -24.08 By element: Atomic # 1 Polarization: -16.95 SS G_CDS: -1.71 Total: -18.67 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: 3.37 Total: 4.37 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -4.33 Total: -1.39 kcal Atomic # 8 Polarization: -6.94 SS G_CDS: -3.95 Total: -10.89 kcal Atomic # 9 Polarization: -0.15 SS G_CDS: 0.76 Total: 0.60 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: 2.04 Total: 1.89 kcal Total: -20.24 -3.84 -24.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_15413834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.800 kcal (2) G-P(sol) polarization free energy of solvation -20.238 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.038 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.837 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.075 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds