Wall clock time and date at job start Sun Mar 7 2021 08:58:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86305 * 109.47201 * 2 1 4 4 C 1.50698 * 109.47383 * 239.99837 * 2 1 3 5 5 C 1.34496 * 125.49468 * 149.97462 * 4 2 1 6 6 C 1.46748 * 106.36670 * 180.02562 * 5 4 2 7 7 C 1.47263 * 126.97142 * 179.97438 * 6 5 4 8 8 O 1.21623 * 120.00126 * 180.02562 * 7 6 5 9 9 N 1.34777 * 119.99630 * 0.02562 * 7 6 5 10 10 C 1.46499 * 119.99665 * 179.72408 * 9 7 6 11 11 C 1.53004 * 109.47198 * 180.27868 * 10 9 7 12 12 F 1.39897 * 112.84783 * 316.19675 * 11 10 9 13 13 C 1.53787 * 113.61355 * 87.50373 * 11 10 9 14 14 C 1.53783 * 87.08023 * 139.98452 * 13 11 10 15 15 H 1.08995 * 113.61720 * 89.11229 * 14 13 11 16 16 C 1.53003 * 113.68795 * 220.00911 * 14 13 11 17 17 O 1.42906 * 109.46830 * 272.53281 * 16 14 13 18 18 C 1.53782 * 113.61417 * 185.00090 * 11 10 9 19 19 C 1.36338 * 106.05842 * 0.24680 * 6 5 4 20 20 C 1.51006 * 126.78751 * 180.46335 * 19 6 5 21 21 C 1.53392 * 108.30920 * 163.85358 * 20 19 6 22 22 C 1.53154 * 109.04567 * 48.24928 * 21 20 19 23 23 C 1.53126 * 109.53085 * 290.43259 * 22 21 20 24 24 N 1.35204 * 108.66147 * 359.60103 * 19 6 5 25 25 H 0.96699 * 114.00045 * 59.99627 * 1 2 3 26 26 H 1.09001 * 109.46942 * 119.99950 * 2 1 3 27 27 H 1.48492 * 109.99812 * 298.68091 * 3 2 1 28 28 H 1.48501 * 109.99790 * 60.00112 * 3 2 1 29 29 H 1.08000 * 126.81389 * 0.02562 * 5 4 2 30 30 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 31 31 H 1.09009 * 109.47454 * 300.27637 * 10 9 7 32 32 H 1.08998 * 109.47492 * 60.27932 * 10 9 7 33 33 H 1.08998 * 113.61128 * 254.53330 * 13 11 10 34 34 H 1.08998 * 113.61325 * 25.42994 * 13 11 10 35 35 H 1.08994 * 109.47045 * 32.53180 * 16 14 13 36 36 H 1.08999 * 109.46892 * 152.53122 * 16 14 13 37 37 H 0.96696 * 113.99745 * 179.97438 * 17 16 14 38 38 H 1.09001 * 113.61616 * 334.56263 * 18 11 10 39 39 H 1.09000 * 113.61435 * 105.38746 * 18 11 10 40 40 H 1.09001 * 109.86461 * 44.02862 * 20 19 6 41 41 H 1.09005 * 109.51733 * 283.46896 * 20 19 6 42 42 H 1.09008 * 109.53931 * 288.38083 * 21 20 19 43 43 H 1.09007 * 109.53985 * 168.12233 * 21 20 19 44 44 H 1.08994 * 109.46086 * 170.40950 * 22 21 20 45 45 H 1.09003 * 109.45742 * 50.44894 * 22 21 20 46 46 H 1.09000 * 109.56112 * 291.14033 * 23 22 21 47 47 H 1.09003 * 109.65587 * 170.86147 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 3.0856 -0.4460 -1.8683 6 6 3.1550 -1.3770 -3.0005 7 6 4.2326 -1.4782 -3.9991 8 8 4.1595 -2.3015 -4.8913 9 7 5.2997 -0.6584 -3.9243 10 6 6.3746 -0.7632 -4.9142 11 6 7.4600 0.2683 -4.5996 12 9 6.9374 1.5234 -4.2697 13 6 8.5229 -0.2380 -3.6102 14 6 9.5644 0.4838 -4.4814 15 1 9.7335 1.5207 -4.1910 16 6 10.8646 -0.3020 -4.6630 17 8 11.7571 -0.0011 -3.5883 18 6 8.5799 0.3247 -5.6521 19 6 2.0165 -2.1250 -2.9440 20 6 1.6162 -3.2350 -3.8863 21 6 0.4958 -4.0477 -3.2251 22 6 -0.5696 -3.0866 -2.6896 23 6 -0.0054 -2.3102 -1.4965 24 7 1.2886 -1.7250 -1.8772 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5138 0.8900 27 1 1.5880 2.4585 -1.2242 28 1 1.5615 2.4679 1.2085 29 1 3.8162 0.3028 -1.6003 30 1 5.3582 -0.0020 -3.2125 31 1 6.8041 -1.7645 -4.8797 32 1 5.9718 -0.5747 -5.9093 33 1 8.4235 0.1828 -2.6096 34 1 8.6335 -1.3223 -3.6054 35 1 10.6464 -1.3699 -4.6659 36 1 11.3284 -0.0234 -5.6093 37 1 12.6037 -0.4655 -3.6384 38 1 8.7063 -0.6059 -6.2054 39 1 8.5258 1.1989 -6.3008 40 1 2.4721 -3.8808 -4.0827 41 1 1.2566 -2.8066 -4.8219 42 1 0.9065 -4.6322 -2.4017 43 1 0.0475 -4.7161 -3.9603 44 1 -1.4444 -3.6542 -2.3726 45 1 -0.8557 -2.3874 -3.4754 46 1 0.1341 -2.9871 -0.6536 47 1 -0.6969 -1.5156 -1.2159 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_16915396.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:59 Heat of formation + Delta-G solvation = -100.588566 kcal Electronic energy + Delta-G solvation = -30213.213499 eV Core-core repulsion = 25892.021905 eV Total energy + Delta-G solvation = -4321.191595 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.168 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -48.77185 -42.75514 -40.28041 -39.61715 -38.14902 -37.20267 -36.93062 -35.31997 -33.46161 -31.20927 -30.61588 -29.24523 -27.30094 -27.04352 -26.35776 -24.69521 -23.70414 -22.15932 -21.77151 -21.10461 -20.60826 -19.65632 -18.97737 -18.32796 -17.54705 -17.31935 -16.87217 -16.75483 -16.68267 -16.38820 -16.24246 -16.09112 -15.67320 -15.46014 -15.41354 -15.13553 -15.07730 -14.92706 -14.57654 -14.55267 -14.22403 -14.02165 -13.81675 -13.67536 -13.45648 -13.24839 -13.19402 -12.81997 -12.41007 -12.36324 -12.14384 -12.06122 -11.92451 -11.85775 -11.79180 -11.49563 -11.32675 -10.91700 -10.90740 -10.66278 -9.98845 -9.51764 -8.98128 -5.00059 0.86675 1.01209 1.43402 1.61559 1.74905 1.98957 2.38027 2.72364 2.97702 3.06074 3.10258 3.17484 3.34311 3.43582 3.49460 3.53871 3.64233 3.73883 3.75562 3.78021 4.18404 4.22410 4.25074 4.29253 4.34641 4.38331 4.41389 4.43313 4.47971 4.52108 4.56958 4.61643 4.64326 4.68604 4.73043 4.80233 4.82331 4.87920 4.90802 4.94515 5.04169 5.15494 5.19923 5.32053 5.54261 5.77190 6.02762 6.22423 6.23713 6.63219 6.71597 7.49696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.050 4.050 3 Si 0.710 3.290 4 C -0.013 4.013 5 C -0.160 4.160 6 C -0.235 4.235 7 C 0.596 3.404 8 O -0.550 6.550 9 N -0.726 5.726 10 C 0.116 3.884 11 C 0.081 3.919 12 F -0.184 7.184 13 C -0.145 4.145 14 C -0.109 4.109 15 H 0.105 0.895 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.143 4.143 19 C 0.121 3.879 20 C -0.056 4.056 21 C -0.129 4.129 22 C -0.139 4.139 23 C 0.099 3.901 24 N -0.427 5.427 25 H 0.376 0.624 26 H 0.121 0.879 27 H -0.256 1.256 28 H -0.254 1.254 29 H 0.153 0.847 30 H 0.404 0.596 31 H 0.087 0.913 32 H 0.079 0.921 33 H 0.086 0.914 34 H 0.102 0.898 35 H 0.050 0.950 36 H 0.050 0.950 37 H 0.382 0.618 38 H 0.105 0.895 39 H 0.089 0.911 40 H 0.101 0.899 41 H 0.087 0.913 42 H 0.069 0.931 43 H 0.080 0.920 44 H 0.088 0.912 45 H 0.074 0.926 46 H 0.083 0.917 47 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.600 -1.167 0.421 2.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.159 4.159 3 Si 0.609 3.391 4 C -0.121 4.121 5 C -0.185 4.185 6 C -0.244 4.244 7 C 0.386 3.614 8 O -0.429 6.429 9 N -0.378 5.378 10 C -0.008 4.008 11 C 0.062 3.938 12 F -0.164 7.164 13 C -0.183 4.183 14 C -0.127 4.127 15 H 0.123 0.877 16 C 0.008 3.992 17 O -0.379 6.379 18 C -0.181 4.181 19 C 0.003 3.997 20 C -0.093 4.093 21 C -0.167 4.167 22 C -0.177 4.177 23 C -0.022 4.022 24 N -0.104 5.104 25 H 0.225 0.775 26 H 0.139 0.861 27 H -0.180 1.180 28 H -0.179 1.179 29 H 0.170 0.830 30 H 0.240 0.760 31 H 0.106 0.894 32 H 0.097 0.903 33 H 0.104 0.896 34 H 0.120 0.880 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.229 0.771 38 H 0.123 0.877 39 H 0.107 0.893 40 H 0.119 0.881 41 H 0.106 0.894 42 H 0.087 0.913 43 H 0.098 0.902 44 H 0.107 0.893 45 H 0.093 0.907 46 H 0.101 0.899 47 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 0.569 -0.926 0.660 1.272 hybrid contribution -0.577 -0.099 -0.287 0.652 sum -0.008 -1.026 0.374 1.092 Atomic orbital electron populations 1.86585 1.18072 1.79552 1.49745 1.24818 0.83429 1.11132 0.96534 0.94483 0.91433 0.72553 0.80655 1.20637 0.96295 0.95651 0.99539 1.21657 0.97827 1.02465 0.96516 1.19772 0.97831 1.05229 1.01600 1.17280 0.80663 0.79877 0.83587 1.90767 1.79199 1.36971 1.35949 1.45569 1.20827 1.39392 1.32039 1.21743 0.86991 0.98546 0.93519 1.22066 0.92490 0.80376 0.98838 1.92870 1.87937 1.42186 1.93398 1.23715 0.93518 1.01836 0.99185 1.22513 0.92552 1.01257 0.96399 0.87724 1.22146 0.89804 0.97773 0.89519 1.86490 1.30397 1.72072 1.48916 1.23562 0.93160 1.04764 0.96622 1.20385 0.91221 0.97716 0.90362 1.20518 0.99473 0.93467 0.95858 1.21727 0.95841 0.97910 1.01191 1.21936 0.99262 0.99004 0.97448 1.22285 0.82666 0.98909 0.98296 1.43858 1.17597 1.27291 1.21619 0.77539 0.86120 1.18030 1.17858 0.82958 0.76047 0.89438 0.90261 0.89576 0.87991 0.93220 0.93216 0.77122 0.87674 0.89261 0.88115 0.89423 0.91267 0.90181 0.89321 0.90730 0.89892 0.87903 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.15 10.28 -35.23 -0.36 -0.21 16 2 C -0.05 0.04 3.00 36.00 0.11 0.15 16 3 Si 0.71 -0.98 31.11 -169.99 -5.29 -6.27 16 4 C -0.01 -0.01 6.15 -81.87 -0.50 -0.51 16 5 C -0.16 -0.11 9.09 -37.47 -0.34 -0.45 16 6 C -0.23 -0.69 6.28 -103.48 -0.65 -1.34 16 7 C 0.60 2.26 7.81 -12.59 -0.10 2.16 16 8 O -0.55 -3.59 15.34 5.26 0.08 -3.51 16 9 N -0.73 -0.85 5.45 -61.43 -0.33 -1.19 16 10 C 0.12 0.01 5.42 -4.04 -0.02 -0.01 16 11 C 0.08 -0.06 1.74 -89.80 -0.16 -0.22 16 12 F -0.18 -0.25 16.58 2.25 0.04 -0.21 16 13 C -0.14 0.19 7.08 -25.91 -0.18 0.01 16 14 C -0.11 0.11 3.99 -89.80 -0.36 -0.25 16 15 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 16 C 0.09 -0.13 6.89 37.16 0.26 0.13 16 17 O -0.57 -0.06 13.66 -35.23 -0.48 -0.54 16 18 C -0.14 0.28 7.10 -25.91 -0.18 0.10 16 19 C 0.12 0.31 6.57 -81.64 -0.54 -0.23 16 20 C -0.06 -0.08 5.32 -27.53 -0.15 -0.23 16 21 C -0.13 0.10 5.98 -26.45 -0.16 -0.05 16 22 C -0.14 0.23 5.92 -26.59 -0.16 0.08 16 23 C 0.10 -0.08 6.22 -3.69 -0.02 -0.11 16 24 N -0.43 -0.49 3.11 -107.37 -0.33 -0.82 16 25 H 0.38 -0.95 8.27 45.56 0.38 -0.57 16 26 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 27 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 28 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 29 H 0.15 -0.34 6.52 -52.49 -0.34 -0.68 16 30 H 0.40 -0.16 7.16 -40.82 -0.29 -0.45 16 31 H 0.09 -0.03 7.84 -51.92 -0.41 -0.43 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.10 -0.22 7.65 -51.93 -0.40 -0.62 16 35 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 36 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 37 H 0.38 -1.53 9.12 45.56 0.42 -1.12 16 38 H 0.10 -0.37 8.06 -51.93 -0.42 -0.78 16 39 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 40 H 0.10 0.26 7.40 -51.93 -0.38 -0.13 16 41 H 0.09 0.14 8.14 -51.93 -0.42 -0.28 16 42 H 0.07 -0.03 8.12 -51.92 -0.42 -0.46 16 43 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.07 -0.10 8.11 -51.93 -0.42 -0.52 16 46 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 47 H 0.10 -0.17 5.67 -51.93 -0.29 -0.46 16 LS Contribution 377.30 15.07 5.69 5.69 Total: 0.00 -8.95 377.30 -10.56 -19.51 By element: Atomic # 1 Polarization: -5.26 SS G_CDS: -6.41 Total: -11.67 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -3.15 Total: -0.78 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.67 Total: -2.01 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.76 Total: -4.26 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.04 Total: -0.21 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.29 Total: -6.27 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -8.95 -10.56 -19.51 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_16915396.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.079 kcal (2) G-P(sol) polarization free energy of solvation -8.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.029 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.560 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.589 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds