Wall clock time and date at job start Sun Mar 7 2021 08:59:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.46949 * 2 1 4 4 C 1.50700 * 109.47584 * 120.00059 * 2 1 3 5 5 C 1.38715 * 120.02553 * 74.99754 * 4 2 1 6 6 O 1.35898 * 120.05809 * 0.02562 * 5 4 2 7 7 C 1.42898 * 116.99944 * 179.72353 * 6 5 4 8 8 C 1.50706 * 109.47059 * 180.02562 * 7 6 5 9 9 O 1.21283 * 119.99854 * 0.02562 * 8 7 6 10 10 N 1.34767 * 120.00164 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00310 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.47092 * 180.02562 * 11 10 8 13 13 F 1.39899 * 112.85468 * 48.80432 * 12 11 10 14 14 C 1.53781 * 113.61201 * 179.97438 * 12 11 10 15 15 C 1.53776 * 87.08215 * 139.97787 * 14 12 11 16 16 H 1.09004 * 113.61390 * 89.20040 * 15 14 12 17 17 C 1.52999 * 113.61491 * 220.02020 * 15 14 12 18 18 O 1.42903 * 109.47256 * 185.00283 * 17 15 14 19 19 C 1.53780 * 87.08254 * 334.56758 * 15 14 12 20 20 C 1.38748 * 119.88441 * 179.72773 * 5 4 2 21 21 C 1.38127 * 119.94890 * 0.28053 * 20 5 4 22 22 C 1.38289 * 120.05398 * 0.02562 * 21 20 5 23 23 C 1.38169 * 120.03008 * 255.32715 * 4 2 1 24 24 H 0.96700 * 114.00228 * 60.00311 * 1 2 3 25 25 H 1.09000 * 109.47059 * 240.00120 * 2 1 3 26 26 H 1.48505 * 110.00081 * 298.68505 * 3 2 1 27 27 H 1.48498 * 109.99637 * 59.99978 * 3 2 1 28 28 H 1.08994 * 109.46954 * 60.00267 * 7 6 5 29 29 H 1.09000 * 109.46873 * 299.99643 * 7 6 5 30 30 H 0.97001 * 120.00155 * 0.02562 * 10 8 7 31 31 H 1.08998 * 109.47238 * 59.99909 * 11 10 8 32 32 H 1.09008 * 109.46880 * 300.00108 * 11 10 8 33 33 H 1.08998 * 113.61701 * 25.42834 * 14 12 11 34 34 H 1.09000 * 113.69243 * 254.54099 * 14 12 11 35 35 H 1.08997 * 109.47286 * 64.99843 * 17 15 14 36 36 H 1.09008 * 109.47201 * 304.99623 * 17 15 14 37 37 H 0.96700 * 114.00311 * 180.02562 * 18 17 15 38 38 H 1.08997 * 113.61633 * 139.97829 * 19 15 14 39 39 H 1.09002 * 113.61577 * 270.88412 * 19 15 14 40 40 H 1.08001 * 120.02935 * 180.25388 * 20 5 4 41 41 H 1.07998 * 119.97195 * 180.02562 * 21 20 5 42 42 H 1.07996 * 119.94652 * 179.97438 * 22 21 20 43 43 H 1.07997 * 119.96752 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 1.8698 -2.0941 1.3069 6 8 1.3568 -2.8107 0.2724 7 6 1.3303 -4.2320 0.4180 8 6 0.7330 -4.8526 -0.8187 9 8 0.3667 -4.1472 -1.7347 10 7 0.6070 -6.1915 -0.9071 11 6 0.0269 -6.7948 -2.1095 12 6 -0.0016 -8.3166 -1.9535 13 9 -0.5439 -8.7274 -0.7311 14 6 -0.5961 -9.0492 -3.1679 15 6 0.5079 -10.1020 -2.9741 16 1 0.2256 -10.9120 -2.3015 17 6 1.1138 -10.6034 -4.2865 18 8 2.0411 -11.6554 -4.0118 19 6 1.3345 -8.9962 -2.2969 20 6 2.3384 -2.7455 2.4387 21 6 2.8597 -2.0149 3.4887 22 6 2.9142 -0.6351 3.4126 23 6 2.4477 0.0163 2.2861 24 1 -0.3934 0.4417 -0.7651 25 1 1.7924 -0.5138 -0.8900 26 1 1.5878 2.4586 -1.2242 27 1 1.5614 2.4678 1.2085 28 1 0.7264 -4.4971 1.2858 29 1 2.3463 -4.6022 0.5554 30 1 0.9003 -6.7557 -0.1746 31 1 0.6313 -6.5294 -2.9769 32 1 -0.9891 -6.4249 -2.2476 33 1 -0.5087 -8.4914 -4.1002 34 1 -1.6015 -9.4344 -2.9980 35 1 1.6315 -9.7835 -4.7843 36 1 0.3204 -10.9782 -4.9332 37 1 2.4650 -12.0219 -4.7999 38 1 1.8878 -9.3382 -1.4223 39 1 1.9498 -8.4237 -2.9910 40 1 2.2953 -3.8229 2.4990 41 1 3.2249 -2.5215 4.3697 42 1 3.3218 -0.0656 4.2347 43 1 2.4914 1.0939 2.2290 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_2989392.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:03 Heat of formation + Delta-G solvation = -138.704737 kcal Electronic energy + Delta-G solvation = -27311.764048 eV Core-core repulsion = 23046.738569 eV Total energy + Delta-G solvation = -4265.025479 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.93079 -41.54570 -40.61340 -39.89665 -38.40862 -37.45137 -37.29897 -35.65825 -32.85441 -31.55902 -30.73198 -29.13514 -27.28567 -26.87185 -26.54870 -23.57401 -22.44731 -22.35016 -21.67629 -20.81325 -19.30918 -18.62634 -18.41172 -18.36377 -17.52177 -17.45809 -17.12616 -16.90339 -16.80527 -16.44542 -16.41407 -15.73848 -15.64201 -15.49166 -15.23517 -15.06646 -14.91611 -14.60140 -14.33166 -13.92291 -13.77930 -13.73101 -13.66560 -13.46983 -13.32550 -12.97184 -12.65633 -12.52696 -12.14134 -12.04449 -11.74788 -11.65740 -11.63500 -11.48347 -11.01682 -10.91024 -10.31295 -10.26229 -9.93931 -9.16643 -4.89380 0.26241 0.45913 1.37989 1.38844 1.45763 1.66106 2.01346 2.48821 2.69370 2.85244 2.95491 2.99991 3.17212 3.34391 3.47995 3.52819 3.62013 3.76292 3.87321 3.90413 3.93273 4.08166 4.13870 4.16509 4.28585 4.28962 4.36066 4.36691 4.37787 4.46585 4.49919 4.53632 4.66417 4.67807 4.74723 4.79948 4.99872 5.10620 5.22565 5.29498 5.39266 5.53504 5.72741 6.17984 6.36124 6.55566 6.64662 7.02627 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.066 4.066 3 Si 0.686 3.314 4 C -0.101 4.101 5 C 0.151 3.849 6 O -0.280 6.280 7 C 0.040 3.960 8 C 0.519 3.481 9 O -0.510 6.510 10 N -0.726 5.726 11 C 0.116 3.884 12 C 0.080 3.920 13 F -0.183 7.183 14 C -0.142 4.142 15 C -0.108 4.108 16 H 0.105 0.895 17 C 0.085 3.915 18 O -0.573 6.573 19 C -0.146 4.146 20 C -0.212 4.212 21 C -0.072 4.072 22 C -0.151 4.151 23 C -0.078 4.078 24 H 0.377 0.623 25 H 0.076 0.924 26 H -0.261 1.261 27 H -0.255 1.255 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.406 0.594 31 H 0.092 0.908 32 H 0.083 0.917 33 H 0.106 0.894 34 H 0.090 0.910 35 H 0.050 0.950 36 H 0.051 0.949 37 H 0.382 0.618 38 H 0.085 0.915 39 H 0.103 0.897 40 H 0.130 0.870 41 H 0.129 0.871 42 H 0.130 0.870 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.177 -3.146 -1.032 5.330 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.176 4.176 3 Si 0.587 3.413 4 C -0.101 4.101 5 C 0.105 3.895 6 O -0.192 6.192 7 C -0.039 4.039 8 C 0.303 3.697 9 O -0.384 6.384 10 N -0.381 5.381 11 C -0.008 4.008 12 C 0.061 3.939 13 F -0.164 7.164 14 C -0.180 4.180 15 C -0.127 4.127 16 H 0.124 0.876 17 C 0.007 3.993 18 O -0.379 6.379 19 C -0.183 4.183 20 C -0.231 4.231 21 C -0.091 4.091 22 C -0.169 4.169 23 C -0.096 4.096 24 H 0.225 0.775 25 H 0.094 0.906 26 H -0.187 1.187 27 H -0.180 1.180 28 H 0.113 0.887 29 H 0.113 0.887 30 H 0.241 0.759 31 H 0.110 0.890 32 H 0.101 0.899 33 H 0.124 0.876 34 H 0.109 0.891 35 H 0.068 0.932 36 H 0.069 0.931 37 H 0.230 0.770 38 H 0.104 0.896 39 H 0.121 0.879 40 H 0.148 0.852 41 H 0.147 0.853 42 H 0.148 0.852 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.498 -1.897 -0.709 4.042 hybrid contribution -0.899 -0.907 -0.417 1.343 sum 2.600 -2.805 -1.125 3.986 Atomic orbital electron populations 1.86604 1.17683 1.80109 1.49340 1.24647 0.84604 1.10257 0.98077 0.95219 0.91418 0.74673 0.79985 1.18596 1.04506 0.90182 0.96855 1.18775 0.93182 0.90790 0.86773 1.86196 1.77553 1.16709 1.38693 1.22438 1.02586 0.81461 0.97415 1.20013 0.79157 0.82133 0.88363 1.90787 1.47318 1.60992 1.39280 1.45626 1.65092 1.06498 1.20895 1.21818 1.00756 0.89661 0.88572 1.22071 0.96736 0.92942 0.82144 1.92885 1.86994 1.91498 1.44995 1.23554 1.00037 0.96782 0.97656 1.22510 0.95773 0.96871 0.97528 0.87646 1.22142 0.91645 0.89712 0.95760 1.86486 1.60382 1.53732 1.37311 1.23716 0.95321 0.96952 1.02347 1.21270 1.06479 1.00425 0.94900 1.21020 0.96331 0.94079 0.97630 1.21052 1.02780 0.94567 0.98504 1.20992 0.96550 0.99874 0.92149 0.77504 0.90573 1.18664 1.18015 0.88711 0.88671 0.75923 0.89021 0.89871 0.87564 0.89098 0.93195 0.93116 0.77025 0.89599 0.87899 0.85226 0.85299 0.85221 0.84785 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -2.30 12.86 -35.23 -0.45 -2.75 16 2 C -0.07 -0.18 2.37 36.01 0.09 -0.10 16 3 Si 0.69 0.39 30.21 -169.99 -5.14 -4.75 16 4 C -0.10 -0.32 5.30 -104.47 -0.55 -0.87 16 5 C 0.15 0.46 6.66 -39.22 -0.26 0.20 16 6 O -0.28 -1.08 9.00 -39.33 -0.35 -1.44 16 7 C 0.04 0.00 5.22 36.01 0.19 0.19 16 8 C 0.52 0.98 7.91 -10.99 -0.09 0.89 16 9 O -0.51 -3.31 16.50 -14.35 -0.24 -3.55 16 10 N -0.73 0.69 5.47 -60.29 -0.33 0.36 16 11 C 0.12 -0.13 5.37 -4.04 -0.02 -0.15 16 12 C 0.08 -0.14 1.67 -89.81 -0.15 -0.29 16 13 F -0.18 -0.10 16.80 2.25 0.04 -0.07 16 14 C -0.14 0.38 7.10 -25.92 -0.18 0.20 16 15 C -0.11 0.18 3.99 -89.81 -0.36 -0.18 16 16 H 0.11 -0.02 8.14 -51.93 -0.42 -0.44 16 17 C 0.09 -0.17 6.88 37.16 0.26 0.08 16 18 O -0.57 0.18 13.66 -35.23 -0.48 -0.30 16 19 C -0.15 0.32 7.08 -25.92 -0.18 0.14 16 20 C -0.21 -0.15 9.04 -39.43 -0.36 -0.51 16 21 C -0.07 -0.01 10.04 -39.60 -0.40 -0.40 16 22 C -0.15 -0.07 10.04 -39.56 -0.40 -0.46 16 23 C -0.08 -0.12 8.66 -39.60 -0.34 -0.47 16 24 H 0.38 0.19 8.74 45.56 0.40 0.59 16 25 H 0.08 0.20 7.83 -51.93 -0.41 -0.21 16 26 H -0.26 -0.69 7.11 56.52 0.40 -0.28 16 27 H -0.26 -0.73 6.74 56.52 0.38 -0.34 16 28 H 0.10 -0.19 7.66 -51.93 -0.40 -0.58 16 29 H 0.10 -0.28 7.66 -51.93 -0.40 -0.68 16 30 H 0.41 -1.28 8.19 -40.82 -0.33 -1.61 16 31 H 0.09 -0.14 7.94 -51.93 -0.41 -0.55 16 32 H 0.08 -0.01 8.14 -51.92 -0.42 -0.43 16 33 H 0.11 -0.44 8.06 -51.93 -0.42 -0.86 16 34 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 35 H 0.05 -0.16 7.84 -51.93 -0.41 -0.57 16 36 H 0.05 -0.14 8.14 -51.92 -0.42 -0.56 16 37 H 0.38 -1.68 9.12 45.56 0.42 -1.27 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 40 H 0.13 -0.25 6.30 -52.49 -0.33 -0.58 16 41 H 0.13 -0.29 8.06 -52.49 -0.42 -0.71 16 42 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 43 H 0.13 0.03 4.90 -52.49 -0.26 -0.23 16 LS Contribution 364.44 15.07 5.49 5.49 Total: 0.00 -11.28 364.44 -9.35 -20.63 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -5.13 Total: -11.91 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -2.76 Total: -1.74 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -0.33 Total: 0.36 kcal Atomic # 8 Polarization: -6.51 SS G_CDS: -1.53 Total: -8.03 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.04 Total: -0.07 kcal Atomic # 14 Polarization: 0.39 SS G_CDS: -5.14 Total: -4.75 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -11.28 -9.35 -20.63 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_2989392.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.070 kcal (2) G-P(sol) polarization free energy of solvation -11.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.352 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.634 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds