Wall clock time and date at job start Sun Mar 7 2021 08:59:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.47371 * 2 1 4 4 C 1.50697 * 109.47360 * 120.00132 * 2 1 3 5 5 C 1.38267 * 119.94354 * 64.99771 * 4 2 1 6 6 C 1.38151 * 120.05677 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94004 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05128 * 180.02562 * 7 6 5 9 9 C 1.42903 * 116.99628 * 180.02562 * 8 7 6 10 10 C 1.53000 * 109.46726 * 180.02562 * 9 8 7 11 11 C 1.50706 * 109.46735 * 180.02562 * 10 9 8 12 12 O 1.21273 * 120.00140 * 359.97438 * 11 10 9 13 13 N 1.34779 * 119.99767 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00054 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47194 * 179.97438 * 14 13 11 16 16 F 1.39896 * 112.84980 * 50.33702 * 15 14 13 17 17 C 1.53786 * 113.61546 * 181.53080 * 15 14 13 18 18 C 1.53785 * 87.08084 * 139.98211 * 17 15 14 19 19 H 1.09003 * 113.61271 * 89.20205 * 18 17 15 20 20 C 1.52995 * 113.61389 * 220.01868 * 18 17 15 21 21 O 1.42896 * 109.47219 * 185.00079 * 20 18 17 22 22 C 1.53787 * 113.61751 * 279.13818 * 15 14 13 23 23 C 1.38730 * 119.89273 * 0.27301 * 7 6 5 24 24 C 1.38147 * 119.94222 * 359.47199 * 23 7 6 25 25 H 0.96708 * 113.99788 * 299.99675 * 1 2 3 26 26 H 1.08998 * 109.46812 * 240.00421 * 2 1 3 27 27 H 1.48505 * 109.99592 * 300.00381 * 3 2 1 28 28 H 1.48500 * 109.99909 * 61.31856 * 3 2 1 29 29 H 1.08003 * 119.97542 * 0.02562 * 5 4 2 30 30 H 1.07997 * 120.02828 * 179.97438 * 6 5 4 31 31 H 1.09002 * 109.47382 * 59.99787 * 9 8 7 32 32 H 1.09001 * 109.46938 * 299.99774 * 9 8 7 33 33 H 1.09001 * 109.47194 * 299.99575 * 10 9 8 34 34 H 1.08992 * 109.47399 * 59.99748 * 10 9 8 35 35 H 0.97005 * 119.99680 * 359.97438 * 13 11 10 36 36 H 1.08998 * 109.47245 * 300.00495 * 14 13 11 37 37 H 1.09002 * 109.47021 * 59.99873 * 14 13 11 38 38 H 1.08998 * 113.61293 * 254.53365 * 17 15 14 39 39 H 1.09000 * 113.61310 * 25.43381 * 17 15 14 40 40 H 1.09002 * 109.47196 * 305.00593 * 20 18 17 41 41 H 1.09006 * 109.47103 * 64.99666 * 20 18 17 42 42 H 0.96706 * 113.99786 * 180.02562 * 21 20 18 43 43 H 1.09002 * 113.61081 * 334.56984 * 22 15 14 44 44 H 1.08992 * 113.61215 * 105.46922 * 22 15 14 45 45 H 1.07997 * 120.03088 * 179.72386 * 23 7 6 46 46 H 1.07999 * 119.97444 * 180.22577 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1430 -2.7140 2.5245 7 6 2.8522 -2.0142 3.4899 8 8 3.3053 -2.6549 4.5995 9 6 4.0275 -1.8713 5.5516 10 6 4.4540 -2.7581 6.7232 11 6 5.2151 -1.9315 7.7276 12 8 5.3986 -0.7499 7.5260 13 7 5.6926 -2.5059 8.8495 14 6 6.4329 -1.7026 9.8256 15 6 6.8593 -2.5893 10.9973 16 9 7.4993 -3.7632 10.5854 17 6 7.6151 -1.8305 12.1009 18 6 6.8261 -2.6768 13.1140 19 1 7.3156 -3.6155 13.3738 20 6 6.3619 -1.8893 14.3408 21 8 5.7440 -2.7794 15.2724 22 6 5.7438 -2.8254 12.0292 23 6 3.0937 -0.6583 3.3232 24 6 2.6372 -0.0106 2.1916 25 1 -0.3933 0.4417 0.7651 26 1 1.7922 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2085 28 1 1.5880 2.4585 1.2242 29 1 1.1315 -2.6048 0.6455 30 1 1.9492 -3.7685 2.6544 31 1 3.3903 -1.0664 5.9178 32 1 4.9121 -1.4470 5.0767 33 1 3.5696 -3.1828 7.1982 34 1 5.0913 -3.5627 6.3567 35 1 5.5460 -3.4512 9.0106 36 1 7.3170 -1.2775 9.3506 37 1 5.7954 -0.8982 10.1924 38 1 8.6873 -2.0262 12.1097 39 1 7.3774 -0.7675 12.1412 40 1 7.2205 -1.4099 14.8110 41 1 5.6441 -1.1286 14.0340 42 1 5.4244 -2.3474 16.0764 43 1 4.9936 -2.0348 12.0497 44 1 5.3076 -3.8230 11.9800 45 1 3.6417 -0.1104 4.0755 46 1 2.8281 1.0442 2.0596 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:08 Heat of formation + Delta-G solvation = -155.020537 kcal Electronic energy + Delta-G solvation = -28242.701746 eV Core-core repulsion = 23821.431141 eV Total energy + Delta-G solvation = -4421.270604 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -48.88478 -41.40916 -40.82982 -39.80398 -39.18633 -37.32331 -37.20103 -35.66842 -33.46408 -32.07966 -31.53212 -30.20412 -27.50403 -27.02611 -26.38333 -25.29653 -23.49661 -22.29817 -22.16064 -21.50767 -20.66830 -19.55639 -18.46662 -18.28863 -18.00922 -17.58816 -17.54328 -17.04429 -16.89069 -16.50275 -16.40357 -16.31493 -16.09064 -15.99509 -15.68862 -15.41268 -14.97225 -14.74843 -14.61533 -14.55120 -14.40327 -14.29299 -13.94371 -13.69312 -13.49564 -13.42828 -13.21454 -12.88238 -12.83572 -12.39203 -12.27901 -12.07261 -11.90192 -11.79483 -11.58872 -11.54348 -11.34512 -11.08584 -10.82259 -10.59346 -10.27383 -10.04241 -9.23255 -4.93121 0.27432 0.30338 1.31568 1.46438 1.58053 1.64267 1.93786 2.40123 2.64466 3.03682 3.11780 3.15549 3.33811 3.44104 3.51426 3.54628 3.71322 3.80975 3.82496 3.87821 3.88951 4.00763 4.22762 4.25408 4.33298 4.34353 4.42655 4.44748 4.54750 4.57051 4.59501 4.62357 4.66463 4.67290 4.70528 4.77617 4.83800 4.90723 4.97379 4.97616 5.17509 5.22150 5.28320 5.36956 5.48894 5.71667 6.29372 6.34917 6.48819 6.87435 7.04431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.075 4.075 3 Si 0.760 3.240 4 C -0.158 4.158 5 C -0.059 4.059 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.322 6.322 9 C 0.073 3.927 10 C -0.134 4.134 11 C 0.523 3.477 12 O -0.578 6.578 13 N -0.718 5.718 14 C 0.114 3.886 15 C 0.079 3.921 16 F -0.199 7.199 17 C -0.134 4.134 18 C -0.116 4.116 19 H 0.085 0.915 20 C 0.083 3.917 21 O -0.599 6.599 22 C -0.141 4.141 23 C -0.209 4.209 24 C -0.081 4.081 25 H 0.385 0.615 26 H 0.126 0.874 27 H -0.302 1.302 28 H -0.285 1.285 29 H 0.141 0.859 30 H 0.141 0.859 31 H 0.067 0.933 32 H 0.068 0.932 33 H 0.127 0.873 34 H 0.125 0.875 35 H 0.416 0.584 36 H 0.074 0.926 37 H 0.098 0.902 38 H 0.088 0.912 39 H 0.126 0.874 40 H 0.058 0.942 41 H 0.065 0.935 42 H 0.397 0.603 43 H 0.116 0.884 44 H 0.078 0.922 45 H 0.140 0.860 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.927 0.328 4.549 4.952 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.184 4.184 3 Si 0.667 3.333 4 C -0.159 4.159 5 C -0.077 4.077 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.236 6.236 9 C -0.002 4.002 10 C -0.173 4.173 11 C 0.311 3.689 12 O -0.458 6.458 13 N -0.371 5.371 14 C -0.010 4.010 15 C 0.061 3.939 16 F -0.179 7.179 17 C -0.172 4.172 18 C -0.134 4.134 19 H 0.103 0.897 20 C 0.006 3.994 21 O -0.408 6.408 22 C -0.178 4.178 23 C -0.228 4.228 24 C -0.099 4.099 25 H 0.234 0.766 26 H 0.144 0.856 27 H -0.230 1.230 28 H -0.212 1.212 29 H 0.158 0.842 30 H 0.159 0.841 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.145 0.855 34 H 0.143 0.857 35 H 0.253 0.747 36 H 0.092 0.908 37 H 0.116 0.884 38 H 0.106 0.894 39 H 0.144 0.856 40 H 0.076 0.924 41 H 0.083 0.917 42 H 0.247 0.753 43 H 0.134 0.866 44 H 0.096 0.904 45 H 0.158 0.842 46 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.106 1.011 3.477 4.189 hybrid contribution -1.030 -0.172 1.102 1.518 sum 1.076 0.839 4.579 4.778 Atomic orbital electron populations 1.86568 1.18644 1.80334 1.50139 1.25106 0.83283 1.11414 0.98623 0.94100 0.90518 0.72498 0.76221 1.20247 1.02639 0.95145 0.97865 1.20995 0.96551 0.93718 0.96393 1.20679 1.01803 1.01373 0.93882 1.19192 0.94563 0.91361 0.87087 1.85961 1.69314 1.38847 1.29446 1.22456 0.95960 0.93527 0.88285 1.21434 1.03025 0.99194 0.93678 1.20583 0.78598 0.87542 0.82222 1.90739 1.59798 1.17792 1.77488 1.45768 1.56271 1.14339 1.20695 1.21824 0.97291 0.93796 0.88120 1.22153 0.95589 0.82814 0.93391 1.92854 1.83308 1.50039 1.91744 1.23569 1.00745 1.01286 0.91635 1.22531 0.97415 0.99924 0.93532 0.89694 1.22232 0.96836 0.91289 0.89071 1.86442 1.80347 1.39762 1.34229 1.23741 0.96455 1.04608 0.93041 1.21411 1.06525 0.93843 1.01019 1.21030 0.96025 1.00107 0.92699 0.76575 0.85642 1.23037 1.21175 0.84153 0.84076 0.91464 0.91352 0.85521 0.85713 0.74723 0.90815 0.88395 0.89357 0.85593 0.92358 0.91687 0.75285 0.86622 0.90351 0.84205 0.84029 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.88 12.83 -148.98 -1.91 -3.79 16 2 C -0.08 -0.03 2.80 71.24 0.20 0.17 16 3 Si 0.76 -0.53 29.88 68.60 2.05 1.52 16 4 C -0.16 -0.24 5.35 -19.85 -0.11 -0.34 16 5 C -0.06 -0.12 9.68 22.26 0.22 0.10 16 6 C -0.16 -0.47 9.99 22.37 0.22 -0.24 16 7 C 0.12 0.50 6.69 22.51 0.15 0.65 16 8 O -0.32 -1.02 10.14 -92.47 -0.94 -1.96 16 9 C 0.07 0.02 4.03 71.98 0.29 0.31 16 10 C -0.13 0.57 6.07 29.85 0.18 0.75 16 11 C 0.52 0.08 7.83 87.66 0.69 0.77 16 12 O -0.58 -4.71 15.98 -3.01 -0.05 -4.76 16 13 N -0.72 2.52 5.47 -463.07 -2.53 -0.01 16 14 C 0.11 -0.40 5.35 86.38 0.46 0.07 16 15 C 0.08 -0.31 1.64 -10.26 -0.02 -0.33 16 16 F -0.20 -0.27 16.86 44.97 0.76 0.49 16 17 C -0.13 0.82 7.10 31.12 0.22 1.04 16 18 C -0.12 0.38 3.99 -10.21 -0.04 0.34 16 19 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 20 C 0.08 -0.39 6.89 71.98 0.50 0.10 16 21 O -0.60 0.43 13.66 -148.98 -2.03 -1.61 16 22 C -0.14 0.67 7.09 31.18 0.22 0.89 16 23 C -0.21 -0.55 9.04 22.37 0.20 -0.35 16 24 C -0.08 -0.10 8.66 22.26 0.19 0.10 16 25 H 0.39 -0.72 8.70 -74.05 -0.64 -1.37 16 26 H 0.13 -0.19 7.96 -2.39 -0.02 -0.21 16 27 H -0.30 -2.07 7.11 99.48 0.71 -1.36 16 28 H -0.28 -0.90 7.00 99.48 0.70 -0.21 16 29 H 0.14 -0.01 8.06 -2.91 -0.02 -0.03 16 30 H 0.14 0.08 8.06 -2.91 -0.02 0.05 16 31 H 0.07 0.09 7.61 -2.39 -0.02 0.07 16 32 H 0.07 0.09 7.63 -2.39 -0.02 0.07 16 33 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 34 H 0.12 -0.90 8.14 -2.39 -0.02 -0.92 16 35 H 0.42 -2.95 8.23 -92.70 -0.76 -3.72 16 36 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 37 H 0.10 -0.46 7.98 -2.39 -0.02 -0.48 16 38 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 39 H 0.13 -1.28 8.06 -2.39 -0.02 -1.30 16 40 H 0.06 -0.38 8.14 -2.39 -0.02 -0.40 16 41 H 0.06 -0.51 7.85 -2.38 -0.02 -0.53 16 42 H 0.40 -3.58 9.12 -74.05 -0.68 -4.25 16 43 H 0.12 -0.86 7.75 -2.39 -0.02 -0.88 16 44 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 45 H 0.14 0.11 6.30 -2.91 -0.02 0.09 16 46 H 0.14 -0.31 4.83 -2.91 -0.01 -0.33 16 Total: 0.00 -21.50 386.25 -2.11 -23.61 By element: Atomic # 1 Polarization: -16.50 SS G_CDS: -1.03 Total: -17.53 kcal Atomic # 6 Polarization: 0.45 SS G_CDS: 3.58 Total: 4.03 kcal Atomic # 7 Polarization: 2.52 SS G_CDS: -2.53 Total: -0.01 kcal Atomic # 8 Polarization: -7.18 SS G_CDS: -4.93 Total: -12.11 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 0.76 Total: 0.49 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: 2.05 Total: 1.52 kcal Total: -21.50 -2.11 -23.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.409 kcal (2) G-P(sol) polarization free energy of solvation -21.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds