Wall clock time and date at job start Sun Mar 7 2021 08:59:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86307 * 109.46702 * 2 1 4 4 C 1.50698 * 109.47192 * 119.99794 * 2 1 3 5 5 C 1.38243 * 119.97533 * 245.02602 * 4 2 1 6 6 C 1.38289 * 120.11593 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05179 * 359.68379 * 6 5 4 8 8 C 1.38753 * 119.94304 * 0.58832 * 7 6 5 9 9 O 1.35909 * 120.05298 * 179.70587 * 8 7 6 10 10 C 1.42895 * 116.99961 * 359.72446 * 9 8 7 11 11 C 1.52997 * 109.46920 * 180.02562 * 10 9 8 12 12 C 1.53006 * 109.47127 * 179.97438 * 11 10 9 13 13 C 1.50703 * 109.47126 * 180.02562 * 12 11 10 14 14 O 1.21279 * 119.99926 * 359.97438 * 13 12 11 15 15 N 1.34775 * 119.99773 * 180.02562 * 13 12 11 16 16 C 1.46504 * 119.99531 * 179.97438 * 15 13 12 17 17 C 1.53006 * 109.46883 * 179.97438 * 16 15 13 18 18 F 1.39902 * 112.84509 * 48.80760 * 17 16 15 19 19 C 1.53776 * 113.61550 * 180.02562 * 17 16 15 20 20 C 1.53776 * 87.08102 * 139.98366 * 19 17 16 21 21 H 1.09000 * 113.61500 * 89.20488 * 20 19 17 22 22 C 1.53005 * 113.61427 * 220.01844 * 20 19 17 23 23 O 1.42901 * 109.47349 * 185.00026 * 22 20 19 24 24 C 1.53779 * 87.08230 * 334.56539 * 20 19 17 25 25 C 1.38165 * 119.97288 * 65.00353 * 4 2 1 26 26 H 0.96691 * 114.00681 * 299.99846 * 1 2 3 27 27 H 1.08999 * 109.47211 * 240.00310 * 2 1 3 28 28 H 1.48497 * 109.99897 * 299.99610 * 3 2 1 29 29 H 1.48501 * 110.00068 * 61.31840 * 3 2 1 30 30 H 1.08007 * 119.93923 * 359.97438 * 5 4 2 31 31 H 1.08000 * 119.97343 * 179.97438 * 6 5 4 32 32 H 1.08001 * 120.02535 * 180.32515 * 7 6 5 33 33 H 1.09001 * 109.47106 * 60.00630 * 10 9 8 34 34 H 1.08996 * 109.47554 * 300.00074 * 10 9 8 35 35 H 1.09001 * 109.47289 * 60.00046 * 11 10 9 36 36 H 1.08996 * 109.47853 * 300.00158 * 11 10 9 37 37 H 1.08998 * 109.46509 * 60.00429 * 12 11 10 38 38 H 1.08993 * 109.46955 * 299.99989 * 12 11 10 39 39 H 0.96992 * 120.00503 * 359.97438 * 15 13 12 40 40 H 1.09001 * 109.46891 * 60.00097 * 16 15 13 41 41 H 1.08993 * 109.47378 * 299.99469 * 16 15 13 42 42 H 1.09003 * 113.61248 * 254.53555 * 19 17 16 43 43 H 1.09004 * 113.61159 * 25.34874 * 19 17 16 44 44 H 1.08999 * 109.47162 * 305.00095 * 22 20 19 45 45 H 1.09003 * 109.47083 * 65.00251 * 22 20 19 46 46 H 0.96696 * 114.00177 * 180.02562 * 23 22 20 47 47 H 1.08993 * 113.61852 * 270.88272 * 24 20 19 48 48 H 1.08999 * 113.61378 * 139.97764 * 24 20 19 49 49 H 1.08005 * 120.03079 * 0.04140 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6383 -0.0115 2.1912 6 6 3.1001 -0.6604 3.3217 7 6 2.8504 -2.0075 3.4967 8 6 2.1460 -2.7124 2.5312 9 8 1.9041 -4.0393 2.6983 10 6 2.4096 -4.6459 3.8893 11 6 2.0425 -6.1312 3.9004 12 6 2.5843 -6.7809 5.1753 13 6 2.2232 -8.2440 5.1860 14 8 1.5941 -8.7200 4.2649 15 7 2.5985 -9.0231 6.2197 16 6 2.2470 -10.4453 6.2303 17 6 2.7889 -11.0951 7.5052 18 9 2.4745 -10.3706 8.6599 19 6 2.4726 -12.5960 7.6139 20 6 3.8932 -12.7745 8.1749 21 1 3.9510 -12.6712 9.2585 22 6 4.6029 -14.0280 7.6590 23 8 5.8616 -14.1692 8.3207 24 6 4.2709 -11.4944 7.4110 25 6 1.6846 -2.0595 1.3977 26 1 -0.3934 0.4416 0.7649 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 -1.2085 29 1 1.5877 2.4586 1.2242 30 1 2.8302 1.0430 2.0586 31 1 3.6525 -0.1123 4.0706 32 1 3.2068 -2.5126 4.3823 33 1 1.9726 -4.1568 4.7598 34 1 3.4940 -4.5399 3.9190 35 1 2.4798 -6.6201 3.0299 36 1 0.9582 -6.2378 3.8704 37 1 2.1473 -6.2921 6.0460 38 1 3.6686 -6.6744 5.2048 39 1 3.1013 -8.6423 6.9565 40 1 2.6842 -10.9341 5.3597 41 1 1.1627 -10.5518 6.2005 42 1 1.6868 -12.8256 8.3337 43 1 2.3183 -13.0807 6.6499 44 1 3.9861 -14.9037 7.8609 45 1 4.7652 -13.9376 6.5850 46 1 6.3677 -14.9446 8.0420 47 1 4.6097 -11.6782 6.3915 48 1 4.9370 -10.8346 7.9670 49 1 1.1325 -2.6052 0.6468 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:16 Heat of formation + Delta-G solvation = -158.951543 kcal Electronic energy + Delta-G solvation = -29802.798842 eV Core-core repulsion = 25225.820157 eV Total energy + Delta-G solvation = -4576.978684 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -48.91634 -41.28324 -40.84146 -39.92829 -39.17828 -37.38275 -37.30395 -35.66559 -34.93418 -32.46381 -31.36443 -30.52816 -28.55497 -27.28113 -27.04287 -26.54749 -23.76066 -23.45089 -22.31548 -21.87639 -21.48317 -20.78926 -19.22986 -18.41790 -18.40321 -17.86580 -17.57190 -17.51013 -17.20089 -17.01984 -16.89104 -16.57148 -16.42033 -16.30689 -16.09483 -15.60993 -15.44830 -15.13126 -14.96885 -14.91450 -14.68031 -14.19071 -14.15541 -14.05773 -13.83971 -13.64595 -13.38808 -13.38115 -13.25203 -13.04958 -12.75492 -12.51825 -12.39689 -12.27856 -12.03616 -11.87980 -11.67247 -11.64278 -11.52174 -11.46847 -11.02061 -10.91571 -10.60849 -10.24113 -9.91847 -9.21065 -4.94008 0.23311 0.44106 1.28492 1.56462 1.61423 1.79678 1.97358 2.27424 2.69402 2.85658 2.96440 3.01987 3.19109 3.35783 3.40317 3.53749 3.62681 3.65112 3.76904 3.80121 3.89017 4.02376 4.07770 4.12752 4.15334 4.18492 4.22068 4.25200 4.29605 4.36869 4.38515 4.40088 4.42778 4.49715 4.51791 4.57235 4.67355 4.68636 4.76059 4.81282 4.94246 4.99637 5.11744 5.18346 5.26747 5.30473 5.39427 5.46541 5.72098 6.31967 6.42425 6.43220 6.55509 7.11097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.077 4.077 3 Si 0.691 3.309 4 C -0.079 4.079 5 C -0.158 4.158 6 C -0.074 4.074 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.105 4.105 12 C -0.137 4.137 13 C 0.516 3.484 14 O -0.534 6.534 15 N -0.730 5.730 16 C 0.113 3.887 17 C 0.080 3.920 18 F -0.184 7.184 19 C -0.142 4.142 20 C -0.109 4.109 21 H 0.105 0.895 22 C 0.085 3.915 23 O -0.573 6.573 24 C -0.145 4.145 25 C -0.126 4.126 26 H 0.376 0.624 27 H 0.120 0.880 28 H -0.257 1.257 29 H -0.260 1.260 30 H 0.129 0.871 31 H 0.130 0.870 32 H 0.130 0.870 33 H 0.064 0.936 34 H 0.065 0.935 35 H 0.084 0.916 36 H 0.083 0.917 37 H 0.099 0.901 38 H 0.099 0.901 39 H 0.405 0.595 40 H 0.089 0.911 41 H 0.081 0.919 42 H 0.090 0.910 43 H 0.106 0.894 44 H 0.051 0.949 45 H 0.050 0.950 46 H 0.382 0.618 47 H 0.102 0.898 48 H 0.085 0.915 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.153 -1.501 3.110 6.203 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.187 4.187 3 Si 0.592 3.408 4 C -0.079 4.079 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.223 4.223 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.177 4.177 13 C 0.303 3.697 14 O -0.410 6.410 15 N -0.383 5.383 16 C -0.011 4.011 17 C 0.061 3.939 18 F -0.164 7.164 19 C -0.181 4.181 20 C -0.127 4.127 21 H 0.123 0.877 22 C 0.007 3.993 23 O -0.379 6.379 24 C -0.183 4.183 25 C -0.144 4.144 26 H 0.224 0.776 27 H 0.138 0.862 28 H -0.182 1.182 29 H -0.185 1.185 30 H 0.146 0.854 31 H 0.148 0.852 32 H 0.147 0.853 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.102 0.898 36 H 0.102 0.898 37 H 0.118 0.882 38 H 0.118 0.882 39 H 0.240 0.760 40 H 0.108 0.892 41 H 0.099 0.901 42 H 0.108 0.892 43 H 0.124 0.876 44 H 0.069 0.931 45 H 0.068 0.932 46 H 0.230 0.770 47 H 0.120 0.880 48 H 0.103 0.897 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.247 -0.901 2.081 4.814 hybrid contribution -0.549 -0.525 1.122 1.355 sum 3.697 -1.426 3.203 5.096 Atomic orbital electron populations 1.86615 1.17534 1.80002 1.49263 1.25091 0.84090 1.11148 0.98324 0.94868 0.91658 0.74174 0.80072 1.20069 0.97866 0.93597 0.96386 1.20970 1.01510 0.99928 0.95135 1.20909 0.97613 0.93670 0.96982 1.21322 1.04646 0.95950 1.00414 1.19025 0.94920 0.82960 0.94431 1.86086 1.74222 1.19937 1.42243 1.22821 0.98781 0.93764 0.86206 1.21231 1.03526 0.91844 0.97702 1.21522 1.03590 0.92222 1.00403 1.20583 0.78916 0.88641 0.81610 1.90759 1.39250 1.75440 1.35526 1.45855 1.58733 1.09610 1.24134 1.21789 1.01706 0.81386 0.96253 1.22073 0.97984 0.91622 0.82239 1.92881 1.93891 1.78993 1.50668 1.23553 0.97793 0.93041 1.03666 1.22513 0.94477 0.94158 1.01555 0.87668 1.22144 0.84908 0.96875 0.95330 1.86485 1.32294 1.51314 1.67820 1.23706 0.94355 0.97755 1.02492 1.20282 1.03133 0.93708 0.97310 0.77626 0.86237 1.18232 1.18535 0.85408 0.85240 0.85253 0.91771 0.91696 0.89752 0.89784 0.88239 0.88238 0.76016 0.89248 0.90073 0.89152 0.87588 0.93116 0.93205 0.77038 0.87956 0.89654 0.84829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.06 12.83 -35.23 -0.45 -1.51 16 2 C -0.08 -0.03 2.80 36.00 0.10 0.07 16 3 Si 0.69 -0.47 29.88 -169.99 -5.08 -5.55 16 4 C -0.08 -0.08 5.35 -104.65 -0.56 -0.64 16 5 C -0.16 -0.01 8.67 -39.56 -0.34 -0.35 16 6 C -0.07 0.02 10.04 -39.61 -0.40 -0.38 16 7 C -0.20 -0.08 9.04 -39.43 -0.36 -0.44 16 8 C 0.13 0.29 6.69 -39.22 -0.26 0.02 16 9 O -0.31 -0.77 10.14 -19.45 -0.20 -0.96 16 10 C 0.06 -0.05 4.74 37.16 0.18 0.12 16 11 C -0.11 0.04 4.87 -26.73 -0.13 -0.09 16 12 C -0.14 0.35 5.70 -27.88 -0.16 0.19 16 13 C 0.52 0.31 7.83 -10.98 -0.09 0.22 16 14 O -0.53 -2.63 15.98 5.56 0.09 -2.54 16 15 N -0.73 0.91 5.47 -60.29 -0.33 0.58 16 16 C 0.11 -0.13 5.37 -4.04 -0.02 -0.15 16 17 C 0.08 -0.13 1.67 -89.81 -0.15 -0.28 16 18 F -0.18 -0.12 16.80 2.25 0.04 -0.08 16 19 C -0.14 0.37 7.10 -25.92 -0.18 0.18 16 20 C -0.11 0.17 3.99 -89.81 -0.36 -0.19 16 21 H 0.11 -0.01 8.14 -51.93 -0.42 -0.43 16 22 C 0.09 -0.17 6.89 37.16 0.26 0.09 16 23 O -0.57 0.14 13.66 -35.23 -0.48 -0.34 16 24 C -0.15 0.30 7.08 -25.92 -0.18 0.12 16 25 C -0.13 -0.30 9.62 -39.44 -0.38 -0.67 16 26 H 0.38 -0.33 8.70 45.56 0.40 0.07 16 27 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 28 H -0.26 -0.67 7.11 56.52 0.40 -0.26 16 29 H -0.26 -0.29 7.01 56.52 0.40 0.11 16 30 H 0.13 -0.20 4.84 -52.48 -0.25 -0.46 16 31 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 32 H 0.13 -0.22 6.30 -52.49 -0.33 -0.55 16 33 H 0.06 -0.14 7.65 -51.93 -0.40 -0.53 16 34 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 35 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 36 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 37 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 38 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 39 H 0.41 -1.26 8.18 -40.82 -0.33 -1.60 16 40 H 0.09 -0.13 7.94 -51.93 -0.41 -0.54 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 43 H 0.11 -0.43 8.06 -51.93 -0.42 -0.85 16 44 H 0.05 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.05 -0.15 7.84 -51.93 -0.41 -0.56 16 46 H 0.38 -1.66 9.12 45.56 0.42 -1.24 16 47 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 48 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 49 H 0.13 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 407.59 15.07 6.14 6.14 Total: 0.00 -10.26 407.59 -10.11 -20.37 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -6.80 Total: -13.91 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -3.04 Total: -2.19 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -0.33 Total: 0.58 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -1.04 Total: -5.36 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.04 Total: -0.08 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.08 Total: -5.55 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -10.26 -10.11 -20.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.581 kcal (2) G-P(sol) polarization free energy of solvation -10.258 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.112 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds