Wall clock time and date at job start Sun Mar 7 2021 08:59:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86307 * 109.46702 * 2 1 4 4 C 1.50698 * 109.47192 * 119.99794 * 2 1 3 5 5 C 1.38243 * 119.97533 * 245.02602 * 4 2 1 6 6 C 1.38289 * 120.11593 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05179 * 359.68379 * 6 5 4 8 8 C 1.38753 * 119.94304 * 0.58832 * 7 6 5 9 9 O 1.35909 * 120.05298 * 179.70587 * 8 7 6 10 10 C 1.42895 * 116.99961 * 359.72446 * 9 8 7 11 11 C 1.52997 * 109.46920 * 180.02562 * 10 9 8 12 12 C 1.53006 * 109.47127 * 179.97438 * 11 10 9 13 13 C 1.50703 * 109.47126 * 180.02562 * 12 11 10 14 14 O 1.21279 * 119.99926 * 359.97438 * 13 12 11 15 15 N 1.34775 * 119.99773 * 180.02562 * 13 12 11 16 16 C 1.46504 * 119.99531 * 179.97438 * 15 13 12 17 17 C 1.53006 * 109.46883 * 179.97438 * 16 15 13 18 18 F 1.39902 * 112.84509 * 48.80760 * 17 16 15 19 19 C 1.53776 * 113.61550 * 180.02562 * 17 16 15 20 20 C 1.53776 * 87.08102 * 139.98366 * 19 17 16 21 21 H 1.09000 * 113.61500 * 89.20488 * 20 19 17 22 22 C 1.53005 * 113.61427 * 220.01844 * 20 19 17 23 23 O 1.42901 * 109.47349 * 185.00026 * 22 20 19 24 24 C 1.53779 * 87.08230 * 334.56539 * 20 19 17 25 25 C 1.38165 * 119.97288 * 65.00353 * 4 2 1 26 26 H 0.96691 * 114.00681 * 299.99846 * 1 2 3 27 27 H 1.08999 * 109.47211 * 240.00310 * 2 1 3 28 28 H 1.48497 * 109.99897 * 299.99610 * 3 2 1 29 29 H 1.48501 * 110.00068 * 61.31840 * 3 2 1 30 30 H 1.08007 * 119.93923 * 359.97438 * 5 4 2 31 31 H 1.08000 * 119.97343 * 179.97438 * 6 5 4 32 32 H 1.08001 * 120.02535 * 180.32515 * 7 6 5 33 33 H 1.09001 * 109.47106 * 60.00630 * 10 9 8 34 34 H 1.08996 * 109.47554 * 300.00074 * 10 9 8 35 35 H 1.09001 * 109.47289 * 60.00046 * 11 10 9 36 36 H 1.08996 * 109.47853 * 300.00158 * 11 10 9 37 37 H 1.08998 * 109.46509 * 60.00429 * 12 11 10 38 38 H 1.08993 * 109.46955 * 299.99989 * 12 11 10 39 39 H 0.96992 * 120.00503 * 359.97438 * 15 13 12 40 40 H 1.09001 * 109.46891 * 60.00097 * 16 15 13 41 41 H 1.08993 * 109.47378 * 299.99469 * 16 15 13 42 42 H 1.09003 * 113.61248 * 254.53555 * 19 17 16 43 43 H 1.09004 * 113.61159 * 25.34874 * 19 17 16 44 44 H 1.08999 * 109.47162 * 305.00095 * 22 20 19 45 45 H 1.09003 * 109.47083 * 65.00251 * 22 20 19 46 46 H 0.96696 * 114.00177 * 180.02562 * 23 22 20 47 47 H 1.08993 * 113.61852 * 270.88272 * 24 20 19 48 48 H 1.08999 * 113.61378 * 139.97764 * 24 20 19 49 49 H 1.08005 * 120.03079 * 0.04140 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6383 -0.0115 2.1912 6 6 3.1001 -0.6604 3.3217 7 6 2.8504 -2.0075 3.4967 8 6 2.1460 -2.7124 2.5312 9 8 1.9041 -4.0393 2.6983 10 6 2.4096 -4.6459 3.8893 11 6 2.0425 -6.1312 3.9004 12 6 2.5843 -6.7809 5.1753 13 6 2.2232 -8.2440 5.1860 14 8 1.5941 -8.7200 4.2649 15 7 2.5985 -9.0231 6.2197 16 6 2.2470 -10.4453 6.2303 17 6 2.7889 -11.0951 7.5052 18 9 2.4745 -10.3706 8.6599 19 6 2.4726 -12.5960 7.6139 20 6 3.8932 -12.7745 8.1749 21 1 3.9510 -12.6712 9.2585 22 6 4.6029 -14.0280 7.6590 23 8 5.8616 -14.1692 8.3207 24 6 4.2709 -11.4944 7.4110 25 6 1.6846 -2.0595 1.3977 26 1 -0.3934 0.4416 0.7649 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 -1.2085 29 1 1.5877 2.4586 1.2242 30 1 2.8302 1.0430 2.0586 31 1 3.6525 -0.1123 4.0706 32 1 3.2068 -2.5126 4.3823 33 1 1.9726 -4.1568 4.7598 34 1 3.4940 -4.5399 3.9190 35 1 2.4798 -6.6201 3.0299 36 1 0.9582 -6.2378 3.8704 37 1 2.1473 -6.2921 6.0460 38 1 3.6686 -6.6744 5.2048 39 1 3.1013 -8.6423 6.9565 40 1 2.6842 -10.9341 5.3597 41 1 1.1627 -10.5518 6.2005 42 1 1.6868 -12.8256 8.3337 43 1 2.3183 -13.0807 6.6499 44 1 3.9861 -14.9037 7.8609 45 1 4.7652 -13.9376 6.5850 46 1 6.3677 -14.9446 8.0420 47 1 4.6097 -11.6782 6.3915 48 1 4.9370 -10.8346 7.9670 49 1 1.1325 -2.6052 0.6468 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:14 Heat of formation + Delta-G solvation = -161.918983 kcal Electronic energy + Delta-G solvation = -29802.927520 eV Core-core repulsion = 25225.820157 eV Total energy + Delta-G solvation = -4577.107362 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -48.89061 -41.30262 -40.86888 -39.81220 -39.21695 -37.42865 -37.21543 -35.65840 -34.91425 -32.47956 -31.35989 -30.46991 -28.45698 -27.14269 -26.97290 -26.48869 -23.74727 -23.44526 -22.22095 -21.87279 -21.44147 -20.66650 -19.25734 -18.37063 -18.28905 -17.92573 -17.51879 -17.45721 -17.19342 -16.95786 -16.91296 -16.49894 -16.34716 -16.27973 -16.12540 -15.57709 -15.47563 -15.06453 -14.90931 -14.87084 -14.67960 -14.22072 -14.14109 -14.11227 -13.77174 -13.46093 -13.29253 -13.28144 -13.19173 -13.08890 -12.75638 -12.39751 -12.32389 -12.29064 -11.91543 -11.90389 -11.61291 -11.54577 -11.53636 -11.34534 -11.00881 -10.82271 -10.66054 -10.24196 -9.93711 -9.24473 -4.90891 0.21740 0.41317 1.29271 1.55060 1.61316 1.85601 1.96662 2.32273 2.67700 3.02816 3.11040 3.14723 3.33596 3.40420 3.50709 3.61894 3.66730 3.81151 3.84809 3.87512 3.97512 4.11103 4.18975 4.22639 4.25264 4.33475 4.34797 4.39554 4.43327 4.45395 4.54001 4.56316 4.58911 4.61752 4.63499 4.69518 4.70754 4.83286 4.90504 4.96888 4.99235 5.00033 5.14215 5.26464 5.29947 5.37404 5.39089 5.45735 5.75002 6.39902 6.43218 6.45986 6.87170 7.13843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.092 4.092 3 Si 0.783 3.217 4 C -0.082 4.082 5 C -0.161 4.161 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.116 3.884 9 O -0.338 6.338 10 C 0.058 3.942 11 C -0.101 4.101 12 C -0.128 4.128 13 C 0.511 3.489 14 O -0.585 6.585 15 N -0.721 5.721 16 C 0.113 3.887 17 C 0.080 3.920 18 F -0.198 7.198 19 C -0.136 4.136 20 C -0.114 4.114 21 H 0.086 0.914 22 C 0.083 3.917 23 O -0.598 6.598 24 C -0.139 4.139 25 C -0.151 4.151 26 H 0.386 0.614 27 H 0.120 0.880 28 H -0.304 1.304 29 H -0.277 1.277 30 H 0.147 0.853 31 H 0.158 0.842 32 H 0.153 0.847 33 H 0.081 0.919 34 H 0.085 0.915 35 H 0.063 0.937 36 H 0.059 0.941 37 H 0.125 0.875 38 H 0.130 0.870 39 H 0.416 0.584 40 H 0.094 0.906 41 H 0.069 0.931 42 H 0.087 0.913 43 H 0.124 0.876 44 H 0.058 0.942 45 H 0.064 0.936 46 H 0.397 0.603 47 H 0.115 0.885 48 H 0.079 0.921 49 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.761 -0.760 4.438 8.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.200 4.200 3 Si 0.687 3.313 4 C -0.082 4.082 5 C -0.179 4.179 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.253 6.253 10 C -0.017 4.017 11 C -0.139 4.139 12 C -0.167 4.167 13 C 0.299 3.701 14 O -0.465 6.465 15 N -0.373 5.373 16 C -0.011 4.011 17 C 0.061 3.939 18 F -0.178 7.178 19 C -0.174 4.174 20 C -0.133 4.133 21 H 0.104 0.896 22 C 0.006 3.994 23 O -0.407 6.407 24 C -0.177 4.177 25 C -0.170 4.170 26 H 0.235 0.765 27 H 0.138 0.862 28 H -0.232 1.232 29 H -0.203 1.203 30 H 0.164 0.836 31 H 0.176 0.824 32 H 0.171 0.829 33 H 0.099 0.901 34 H 0.104 0.896 35 H 0.082 0.918 36 H 0.078 0.922 37 H 0.143 0.857 38 H 0.148 0.852 39 H 0.253 0.747 40 H 0.112 0.888 41 H 0.087 0.913 42 H 0.106 0.894 43 H 0.142 0.858 44 H 0.076 0.924 45 H 0.083 0.917 46 H 0.247 0.753 47 H 0.133 0.867 48 H 0.098 0.902 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 5.884 -0.193 3.458 6.828 hybrid contribution -1.074 -0.799 0.708 1.514 sum 4.810 -0.991 4.166 6.440 Atomic orbital electron populations 1.86577 1.18629 1.80553 1.50102 1.25428 0.83446 1.12730 0.98418 0.93847 0.90098 0.70946 0.76405 1.20123 0.98115 0.93122 0.96856 1.21220 1.00961 1.00770 0.94938 1.21299 0.96982 0.93562 0.97224 1.21606 1.03873 0.96336 1.00567 1.19206 0.95712 0.83046 0.94974 1.86052 1.74913 1.20409 1.43894 1.22986 1.00039 0.92908 0.85739 1.21147 1.01911 0.92632 0.98229 1.21536 1.05460 0.89769 0.99980 1.21159 0.77978 0.89914 0.81006 1.90739 1.41734 1.76565 1.37505 1.45826 1.58026 1.09552 1.23947 1.21784 1.01053 0.81625 0.96687 1.22133 0.98470 0.91917 0.81345 1.92851 1.94053 1.79434 1.51511 1.23575 0.97115 0.92261 1.04461 1.22491 0.95345 0.94868 1.00567 0.89563 1.22230 0.84444 0.96803 0.95956 1.86438 1.33144 1.52539 1.68585 1.23701 0.93732 0.97252 1.03000 1.20338 1.04333 0.94566 0.97749 0.76474 0.86207 1.23247 1.20326 0.83627 0.82413 0.82948 0.90057 0.89642 0.91834 0.92241 0.85721 0.85232 0.74726 0.88776 0.91301 0.89411 0.85783 0.92401 0.91743 0.75285 0.86714 0.90180 0.86568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.95 12.83 -148.98 -1.91 -4.86 16 2 C -0.09 -0.16 2.80 71.24 0.20 0.04 16 3 Si 0.78 -1.22 29.88 68.60 2.05 0.83 16 4 C -0.08 -0.21 5.35 -19.88 -0.11 -0.32 16 5 C -0.16 0.16 8.67 22.28 0.19 0.35 16 6 C -0.07 0.18 10.04 22.25 0.22 0.40 16 7 C -0.21 0.11 9.04 22.36 0.20 0.31 16 8 C 0.12 0.57 6.69 22.51 0.15 0.72 16 9 O -0.34 -2.06 10.14 -92.52 -0.94 -2.99 16 10 C 0.06 -0.13 4.74 71.98 0.34 0.21 16 11 C -0.10 -0.01 4.87 30.60 0.15 0.14 16 12 C -0.13 0.77 5.70 29.85 0.17 0.94 16 13 C 0.51 0.77 7.83 87.66 0.69 1.46 16 14 O -0.59 -6.78 15.98 -3.03 -0.05 -6.82 16 15 N -0.72 1.91 5.47 -463.05 -2.53 -0.62 16 16 C 0.11 -0.23 5.37 86.38 0.46 0.24 16 17 C 0.08 -0.26 1.67 -10.27 -0.02 -0.28 16 18 F -0.20 -0.31 16.80 44.97 0.76 0.44 16 19 C -0.14 0.72 7.10 31.12 0.22 0.94 16 20 C -0.11 0.34 3.99 -10.27 -0.04 0.30 16 21 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 22 C 0.08 -0.36 6.89 71.98 0.50 0.13 16 23 O -0.60 0.36 13.66 -148.98 -2.04 -1.67 16 24 C -0.14 0.62 7.08 31.12 0.22 0.84 16 25 C -0.15 -0.96 9.62 22.36 0.22 -0.75 16 26 H 0.39 -0.25 8.70 -74.06 -0.64 -0.89 16 27 H 0.12 0.10 7.96 -2.39 -0.02 0.09 16 28 H -0.30 -1.90 7.11 99.48 0.71 -1.19 16 29 H -0.28 -0.33 7.01 99.48 0.70 0.37 16 30 H 0.15 -0.74 4.84 -2.91 -0.01 -0.76 16 31 H 0.16 -1.31 8.06 -2.91 -0.02 -1.33 16 32 H 0.15 -0.90 6.30 -2.91 -0.02 -0.92 16 33 H 0.08 -0.47 7.65 -2.39 -0.02 -0.48 16 34 H 0.09 -0.55 7.67 -2.39 -0.02 -0.56 16 35 H 0.06 0.26 8.10 -2.39 -0.02 0.24 16 36 H 0.06 0.29 8.10 -2.39 -0.02 0.27 16 37 H 0.12 -1.33 8.14 -2.39 -0.02 -1.35 16 38 H 0.13 -1.51 8.14 -2.39 -0.02 -1.53 16 39 H 0.42 -2.95 8.18 -92.71 -0.76 -3.70 16 40 H 0.09 -0.26 7.94 -2.39 -0.02 -0.28 16 41 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 42 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 43 H 0.12 -1.11 8.06 -2.38 -0.02 -1.13 16 44 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 45 H 0.06 -0.48 7.84 -2.39 -0.02 -0.50 16 46 H 0.40 -3.53 9.12 -74.06 -0.68 -4.20 16 47 H 0.11 -0.79 7.72 -2.39 -0.02 -0.81 16 48 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 49 H 0.12 1.00 8.06 -2.91 -0.02 0.97 16 Total: 0.00 -26.74 407.59 -1.95 -28.70 By element: Atomic # 1 Polarization: -17.62 SS G_CDS: -1.06 Total: -18.68 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: 3.77 Total: 5.69 kcal Atomic # 7 Polarization: 1.91 SS G_CDS: -2.53 Total: -0.62 kcal Atomic # 8 Polarization: -11.42 SS G_CDS: -4.93 Total: -16.35 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.76 Total: 0.44 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: 2.05 Total: 0.83 kcal Total: -26.74 -1.95 -28.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.223 kcal (2) G-P(sol) polarization free energy of solvation -26.744 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.952 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds