Wall clock time and date at job start Sun Mar 7 2021 08:59:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36545 * 126.64682 * 2 1 4 4 C 1.46648 * 125.98998 * 0.03376 * 3 2 1 5 5 O 1.21698 * 120.00084 * 359.72132 * 4 3 2 6 6 N 1.34777 * 120.00336 * 179.71786 * 4 3 2 7 7 C 1.46501 * 120.00100 * 180.02562 * 6 4 3 8 8 C 1.53002 * 109.47043 * 180.02562 * 7 6 4 9 9 F 1.39892 * 112.90983 * 48.74652 * 8 7 6 10 10 C 1.53783 * 113.61187 * 180.02562 * 8 7 6 11 11 C 1.53780 * 87.08037 * 139.97960 * 10 8 7 12 12 H 1.08994 * 113.61789 * 89.19805 * 11 10 8 13 13 C 1.52999 * 113.61172 * 220.01768 * 11 10 8 14 14 O 1.42903 * 109.47256 * 183.47236 * 13 11 10 15 15 C 1.53778 * 87.17445 * 334.60760 * 11 10 8 16 16 O 1.34915 * 108.02428 * 179.77418 * 3 2 1 17 17 C 1.33938 * 109.38351 * 0.22638 * 16 3 2 18 18 C 1.50697 * 125.61226 * 180.02562 * 17 16 3 19 19 O 1.42901 * 109.46982 * 269.97150 * 18 17 16 20 20 C 1.35909 * 117.00077 * 180.02562 * 19 18 17 21 21 C 1.38725 * 120.05255 * 359.72150 * 20 19 18 22 22 C 1.38142 * 119.94289 * 179.74426 * 21 20 19 23 23 C 1.38272 * 120.05410 * 0.51435 * 22 21 20 24 24 C 1.50699 * 119.94430 * 179.74211 * 23 22 21 25 25 O 1.42899 * 109.47369 * 245.02041 * 24 23 22 26 26 Si 1.86304 * 109.47310 * 5.02118 * 24 23 22 27 27 C 1.38263 * 120.10885 * 359.76147 * 23 22 21 28 28 C 1.38142 * 120.05942 * 359.97438 * 27 23 22 29 29 C 1.35127 * 108.76698 * 359.97438 * 17 16 3 30 30 H 1.08995 * 109.47162 * 90.00253 * 1 2 3 31 31 H 1.08998 * 109.47036 * 210.00725 * 1 2 3 32 32 H 1.09005 * 109.46758 * 329.99979 * 1 2 3 33 33 H 0.97000 * 120.00114 * 0.02562 * 6 4 3 34 34 H 1.08993 * 109.47492 * 59.99943 * 7 6 4 35 35 H 1.09006 * 109.46901 * 299.99913 * 7 6 4 36 36 H 1.08994 * 113.61896 * 25.42670 * 10 8 7 37 37 H 1.08998 * 113.68823 * 254.53685 * 10 8 7 38 38 H 1.08997 * 109.47286 * 63.46796 * 13 11 10 39 39 H 1.09008 * 109.47201 * 303.46576 * 13 11 10 40 40 H 0.96700 * 114.00311 * 180.02562 * 14 13 11 41 41 H 1.08994 * 113.61751 * 139.94120 * 15 11 10 42 42 H 1.09008 * 113.61216 * 270.84647 * 15 11 10 43 43 H 1.08996 * 109.47628 * 29.96930 * 18 17 16 44 44 H 1.09004 * 109.46844 * 149.97562 * 18 17 16 45 45 H 1.08003 * 120.03027 * 0.02562 * 21 20 19 46 46 H 1.07998 * 119.97683 * 180.23104 * 22 21 20 47 47 H 1.08999 * 109.47131 * 125.01947 * 24 23 22 48 48 H 0.96703 * 113.99512 * 59.99697 * 25 24 23 49 49 H 1.48508 * 109.99856 * 58.67746 * 26 24 23 50 50 H 1.48501 * 110.00044 * 179.97438 * 26 24 23 51 51 H 1.08004 * 119.96965 * 179.97438 * 27 23 22 52 52 H 1.07996 * 120.02926 * 179.97438 * 28 27 23 53 53 H 1.08000 * 126.44291 * 179.97438 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3220 1.0955 0.0000 4 6 1.8844 2.4952 0.0007 5 8 0.6969 2.7615 -0.0038 6 7 2.7972 3.4867 0.0064 7 6 2.3600 4.8850 0.0076 8 6 3.5845 5.8023 0.0137 9 9 4.5331 5.4506 -0.9525 10 6 3.2327 7.2993 0.0161 11 6 4.3924 7.4898 1.0079 12 1 5.3519 7.6788 0.5267 13 6 4.0834 8.4848 2.1283 14 8 5.2420 8.6548 2.9473 15 6 4.1858 6.0211 1.4140 16 8 3.6005 0.6647 0.0051 17 6 3.6183 -0.6745 0.0033 18 6 4.8550 -1.5357 0.0081 19 8 5.2520 -1.8065 -1.3377 20 6 6.3582 -2.5768 -1.5115 21 6 7.0506 -3.0570 -0.4094 22 6 8.1716 -3.8441 -0.5887 23 6 8.6099 -4.1445 -1.8653 24 6 9.8365 -4.9985 -2.0579 25 8 10.8638 -4.2234 -2.6792 26 14 10.4345 -5.6091 -0.4025 27 6 7.9249 -3.6623 -2.9652 28 6 6.8001 -2.8793 -2.7913 29 6 2.3448 -1.1262 -0.0024 30 1 -0.3633 0.0000 -1.0276 31 1 -0.3633 -0.8899 0.5139 32 1 -0.3633 0.8900 0.5139 33 1 3.7437 3.2746 0.0096 34 1 1.7577 5.0765 0.8956 35 1 1.7646 5.0802 -0.8843 36 1 2.2534 7.5171 0.4422 37 1 3.3947 7.7887 -0.9443 38 1 3.2618 8.1047 2.7354 39 1 3.8011 9.4442 1.6946 40 1 5.1183 9.2735 3.6802 41 1 5.1166 5.4789 1.5801 42 1 3.4674 5.8887 2.2232 43 1 5.6594 -1.0136 0.5261 44 1 4.6422 -2.4742 0.5200 45 1 6.7108 -2.8195 0.5879 46 1 8.7089 -4.2213 0.2689 47 1 9.5903 -5.8502 -2.6920 48 1 11.1337 -3.4473 -2.1693 49 1 9.3638 -6.3899 0.2678 50 1 11.6435 -6.4531 -0.5789 51 1 8.2694 -3.8980 -3.9613 52 1 6.2656 -2.5026 -3.6508 53 1 2.0306 -2.1595 -0.0055 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4549632.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:23 Heat of formation + Delta-G solvation = -130.694820 kcal Electronic energy + Delta-G solvation = -37298.804047 eV Core-core repulsion = 32019.690052 eV Total energy + Delta-G solvation = -5279.113994 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.172 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -48.92043 -43.96830 -41.30923 -40.77186 -39.78004 -39.22395 -37.23021 -37.18278 -36.03539 -35.08609 -33.25519 -32.09136 -31.57000 -30.59659 -28.89975 -28.37888 -27.11337 -26.73334 -26.15789 -24.13522 -22.96209 -22.65358 -22.24862 -22.16982 -20.98365 -20.63628 -19.48547 -19.41938 -18.34059 -18.28359 -17.63835 -17.60269 -17.42786 -16.99060 -16.89100 -16.78025 -16.53359 -16.45234 -16.13238 -15.97354 -15.80943 -15.68420 -15.41901 -15.13542 -14.89702 -14.68796 -14.60826 -14.36269 -14.28185 -14.23518 -14.08343 -13.82824 -13.79938 -13.71694 -13.50967 -13.44078 -13.43443 -13.22770 -12.83703 -12.40675 -12.26297 -12.06897 -12.05046 -11.91250 -11.75361 -11.60979 -11.36940 -11.28799 -10.83559 -10.82078 -10.47270 -10.40375 -10.04539 -9.75450 -9.24597 -4.99249 -0.30394 0.27059 0.30450 0.93643 1.32031 1.33867 1.64714 1.85238 1.90366 1.98704 2.34841 2.65265 3.00776 3.08312 3.11264 3.27433 3.32208 3.50236 3.56803 3.61289 3.64094 3.71502 3.81193 3.81749 3.94349 4.01336 4.07084 4.21001 4.26817 4.30763 4.33906 4.41473 4.42366 4.45536 4.49579 4.49653 4.58429 4.59797 4.61663 4.67764 4.69879 4.71241 4.82300 4.86311 4.95230 4.96277 4.97280 5.01852 5.09047 5.15254 5.25260 5.32737 5.35514 5.49919 5.63062 5.68982 6.17521 6.27927 6.78768 6.79315 6.89048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C -0.092 4.092 3 C -0.097 4.097 4 C 0.605 3.395 5 O -0.540 6.540 6 N -0.711 5.711 7 C 0.113 3.887 8 C 0.075 3.925 9 F -0.201 7.201 10 C -0.131 4.131 11 C -0.114 4.114 12 H 0.084 0.916 13 C 0.084 3.916 14 O -0.599 6.599 15 C -0.142 4.142 16 O -0.162 6.162 17 C 0.011 3.989 18 C 0.135 3.865 19 O -0.328 6.328 20 C 0.124 3.876 21 C -0.201 4.201 22 C -0.075 4.075 23 C -0.161 4.161 24 C -0.072 4.072 25 O -0.558 6.558 26 Si 0.777 3.223 27 C -0.062 4.062 28 C -0.164 4.164 29 C -0.187 4.187 30 H 0.077 0.923 31 H 0.090 0.910 32 H 0.073 0.927 33 H 0.413 0.587 34 H 0.108 0.892 35 H 0.081 0.919 36 H 0.130 0.870 37 H 0.089 0.911 38 H 0.066 0.934 39 H 0.059 0.941 40 H 0.397 0.603 41 H 0.074 0.926 42 H 0.117 0.883 43 H 0.105 0.895 44 H 0.131 0.869 45 H 0.161 0.839 46 H 0.153 0.847 47 H 0.103 0.897 48 H 0.395 0.605 49 H -0.283 1.283 50 H -0.304 1.304 51 H 0.133 0.867 52 H 0.130 0.870 53 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.097 2.408 6.410 6.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.095 4.095 3 C -0.149 4.149 4 C 0.392 3.608 5 O -0.420 6.420 6 N -0.362 5.362 7 C -0.010 4.010 8 C 0.057 3.943 9 F -0.181 7.181 10 C -0.169 4.169 11 C -0.132 4.132 12 H 0.103 0.897 13 C 0.006 3.994 14 O -0.408 6.408 15 C -0.179 4.179 16 O -0.059 6.059 17 C -0.041 4.041 18 C 0.061 3.939 19 O -0.242 6.242 20 C 0.079 3.921 21 C -0.219 4.219 22 C -0.092 4.092 23 C -0.162 4.162 24 C -0.182 4.182 25 O -0.367 6.367 26 Si 0.683 3.317 27 C -0.080 4.080 28 C -0.182 4.182 29 C -0.206 4.206 30 H 0.095 0.905 31 H 0.108 0.892 32 H 0.092 0.908 33 H 0.249 0.751 34 H 0.126 0.874 35 H 0.099 0.901 36 H 0.148 0.852 37 H 0.108 0.892 38 H 0.084 0.916 39 H 0.078 0.922 40 H 0.247 0.753 41 H 0.093 0.907 42 H 0.136 0.864 43 H 0.123 0.877 44 H 0.148 0.852 45 H 0.179 0.821 46 H 0.170 0.830 47 H 0.121 0.879 48 H 0.245 0.755 49 H -0.210 1.210 50 H -0.232 1.232 51 H 0.150 0.850 52 H 0.148 0.852 53 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges -0.438 1.365 5.867 6.040 hybrid contribution 0.001 0.038 -0.598 0.599 sum -0.437 1.403 5.269 5.470 Atomic orbital electron populations 1.20466 0.87228 1.04130 1.03291 1.20986 0.98518 0.91155 0.98843 1.21826 0.81757 0.94849 1.16439 1.16536 0.85452 0.82209 0.76574 1.90859 1.16483 1.82721 1.51950 1.45724 1.10375 1.06032 1.74068 1.21994 0.95600 0.78411 1.05020 1.22261 0.87001 0.96517 0.88550 1.92852 1.66514 1.93255 1.65517 1.23557 1.00695 0.91440 1.01159 1.22483 0.99521 0.94793 0.96437 0.89741 1.22225 0.87485 0.98282 0.91361 1.86442 1.38577 1.69399 1.46371 1.23758 1.02539 0.96561 0.95084 1.83975 1.28159 1.22682 1.71090 1.22446 0.97064 0.80242 1.04349 1.21274 0.91695 0.98169 0.82755 1.86112 1.42328 1.66453 1.29352 1.19100 0.86516 0.91721 0.94716 1.21496 0.98453 1.03039 0.98928 1.21050 0.95719 0.96114 0.96354 1.20350 0.99290 1.02730 0.93815 1.25150 0.87127 0.96160 1.09734 1.86469 1.54853 1.43887 1.51448 0.93815 0.76854 0.84290 0.76696 1.20923 0.92861 0.94729 0.99488 1.20622 0.99103 1.03010 0.95481 1.21899 0.90855 1.01273 1.06568 0.90492 0.89150 0.90781 0.75106 0.87446 0.90073 0.85218 0.89217 0.91564 0.92239 0.75265 0.90698 0.86432 0.87720 0.85158 0.82105 0.82983 0.87940 0.75534 1.20958 1.23197 0.84959 0.85194 0.79865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.27 9.81 71.24 0.70 0.43 16 2 C -0.09 -0.45 6.20 -19.74 -0.12 -0.58 16 3 C -0.10 -0.64 7.13 24.07 0.17 -0.47 16 4 C 0.61 4.36 7.79 86.44 0.67 5.04 16 5 O -0.54 -6.29 14.74 -4.34 -0.06 -6.35 16 6 N -0.71 -1.71 5.46 -467.10 -2.55 -4.27 16 7 C 0.11 -0.11 5.37 86.38 0.46 0.35 16 8 C 0.08 -0.14 1.67 -10.21 -0.02 -0.15 16 9 F -0.20 -0.86 16.79 44.97 0.76 -0.11 16 10 C -0.13 0.69 7.10 31.12 0.22 0.91 16 11 C -0.11 0.27 3.98 -10.27 -0.04 0.23 16 12 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 13 C 0.08 -0.37 6.87 71.98 0.49 0.13 16 14 O -0.60 0.22 13.66 -148.98 -2.04 -1.82 16 15 C -0.14 0.42 7.09 31.18 0.22 0.64 16 16 O -0.16 -0.77 10.40 -5.13 -0.05 -0.83 16 17 C 0.01 0.01 6.94 24.97 0.17 0.19 16 18 C 0.13 -0.56 5.27 71.23 0.38 -0.18 16 19 O -0.33 -0.67 10.12 -92.53 -0.94 -1.61 16 20 C 0.12 0.14 6.69 22.50 0.15 0.29 16 21 C -0.20 0.69 9.04 22.36 0.20 0.90 16 22 C -0.08 0.26 8.66 22.26 0.19 0.45 16 23 C -0.16 0.08 5.35 -19.85 -0.11 -0.03 16 24 C -0.07 0.06 2.80 71.24 0.20 0.26 16 25 O -0.56 -0.23 12.83 -148.98 -1.91 -2.14 16 26 Si 0.78 -2.42 29.80 68.60 2.04 -0.37 16 27 C -0.06 -0.10 9.68 22.25 0.22 0.11 16 28 C -0.16 -0.43 9.99 22.36 0.22 -0.21 16 29 C -0.19 -0.20 10.73 22.07 0.24 0.04 16 30 H 0.08 0.22 8.14 -2.39 -0.02 0.20 16 31 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 32 H 0.07 0.45 6.45 -2.38 -0.02 0.43 16 33 H 0.41 0.44 7.94 -92.71 -0.74 -0.30 16 34 H 0.11 -0.39 7.95 -2.39 -0.02 -0.41 16 35 H 0.08 0.02 8.14 -2.38 -0.02 0.00 16 36 H 0.13 -1.29 8.06 -2.39 -0.02 -1.30 16 37 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 38 H 0.07 -0.51 7.87 -2.39 -0.02 -0.53 16 39 H 0.06 -0.37 8.14 -2.38 -0.02 -0.39 16 40 H 0.40 -3.49 9.12 -74.06 -0.68 -4.17 16 41 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 42 H 0.12 -0.71 7.75 -2.38 -0.02 -0.73 16 43 H 0.10 -0.80 7.65 -2.39 -0.02 -0.82 16 44 H 0.13 -1.31 7.67 -2.39 -0.02 -1.32 16 45 H 0.16 -1.56 6.30 -2.91 -0.02 -1.58 16 46 H 0.15 -1.30 4.90 -2.91 -0.01 -1.32 16 47 H 0.10 0.07 7.96 -2.39 -0.02 0.06 16 48 H 0.39 -3.04 8.70 -74.06 -0.64 -3.68 16 49 H -0.28 -0.30 7.11 99.48 0.71 0.40 16 50 H -0.30 -1.54 7.11 99.48 0.71 -0.84 16 51 H 0.13 0.12 8.06 -2.91 -0.02 0.10 16 52 H 0.13 0.30 8.06 -2.91 -0.02 0.28 16 53 H 0.18 -0.79 8.06 -2.91 -0.02 -0.81 16 Total: 0.00 -25.26 445.66 -1.15 -26.41 By element: Atomic # 1 Polarization: -16.24 SS G_CDS: -1.03 Total: -17.26 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: 4.63 Total: 8.35 kcal Atomic # 7 Polarization: -1.71 SS G_CDS: -2.55 Total: -4.27 kcal Atomic # 8 Polarization: -7.75 SS G_CDS: -5.00 Total: -12.75 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.76 Total: -0.11 kcal Atomic # 14 Polarization: -2.42 SS G_CDS: 2.04 Total: -0.37 kcal Total: -25.26 -1.15 -26.41 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549632.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.280 kcal (2) G-P(sol) polarization free energy of solvation -25.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.415 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.695 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds