Wall clock time and date at job start Sun Mar 7 2021 08:59:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47443 * 2 1 4 4 C 1.50696 * 109.47031 * 239.99635 * 2 1 3 5 5 C 1.38243 * 119.94448 * 120.00934 * 4 2 1 6 6 C 1.38162 * 120.05685 * 180.02562 * 5 4 2 7 7 C 1.38707 * 119.94783 * 359.97435 * 6 5 4 8 8 O 1.35898 * 120.05798 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99944 * 359.97438 * 8 7 6 10 10 C 1.50706 * 109.47059 * 180.02562 * 9 8 7 11 11 O 1.21283 * 119.99854 * 0.02562 * 10 9 8 12 12 N 1.34767 * 120.00164 * 179.97438 * 10 9 8 13 13 C 1.46500 * 120.00310 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47092 * 180.02562 * 13 12 10 15 15 F 1.39895 * 112.91111 * 48.74636 * 14 13 12 16 16 C 1.53781 * 113.61201 * 179.97438 * 14 13 12 17 17 C 1.53776 * 87.08215 * 139.97787 * 16 14 13 18 18 H 1.09004 * 113.61390 * 89.20040 * 17 16 14 19 19 C 1.52999 * 113.61491 * 220.02020 * 17 16 14 20 20 O 1.42903 * 109.47256 * 185.00283 * 19 17 16 21 21 C 1.53780 * 87.08254 * 334.56758 * 17 16 14 22 22 C 1.38759 * 119.88484 * 0.25360 * 7 6 5 23 23 N 1.48002 * 120.02527 * 179.72709 * 22 7 6 24 24 O 1.21805 * 119.99753 * 179.97438 * 23 22 7 25 25 O 1.21802 * 120.00348 * 0.02562 * 23 22 7 26 26 C 1.38124 * 119.94178 * 359.51249 * 22 7 6 27 27 H 0.96707 * 113.99551 * 59.99804 * 1 2 3 28 28 H 1.09007 * 109.46692 * 120.00092 * 2 1 3 29 29 H 1.48497 * 110.00016 * 298.67897 * 3 2 1 30 30 H 1.48502 * 109.99917 * 59.99779 * 3 2 1 31 31 H 1.08001 * 119.96608 * 0.02562 * 5 4 2 32 32 H 1.08004 * 120.02463 * 179.97438 * 6 5 4 33 33 H 1.08994 * 109.46954 * 60.00267 * 9 8 7 34 34 H 1.09000 * 109.46873 * 299.99643 * 9 8 7 35 35 H 0.97001 * 120.00155 * 0.02562 * 12 10 9 36 36 H 1.08998 * 109.47238 * 59.99909 * 13 12 10 37 37 H 1.09008 * 109.46880 * 300.00108 * 13 12 10 38 38 H 1.08998 * 113.61701 * 25.42834 * 16 14 13 39 39 H 1.09000 * 113.69243 * 254.54099 * 16 14 13 40 40 H 1.08997 * 109.47286 * 64.99843 * 19 17 16 41 41 H 1.09008 * 109.47201 * 304.99623 * 19 17 16 42 42 H 0.96700 * 114.00311 * 180.02562 * 20 19 17 43 43 H 1.08997 * 113.61633 * 139.97829 * 21 17 16 44 44 H 1.09002 * 113.61577 * 270.88412 * 21 17 16 45 45 H 1.08005 * 119.97063 * 180.22921 * 26 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7262 -0.0376 -2.1396 6 6 3.1875 -0.6866 -3.2687 7 6 2.8530 -2.0145 -3.4894 8 8 3.3052 -2.6549 -4.5995 9 6 4.1205 -1.8993 -5.4975 10 6 4.5241 -2.7677 -6.6612 11 8 4.1499 -3.9200 -6.7163 12 7 5.2998 -2.2635 -7.6411 13 6 5.6917 -3.1075 -8.7726 14 6 6.5647 -2.2985 -9.7340 15 9 7.5974 -1.6126 -9.0858 16 6 7.0323 -3.0974 -10.9620 17 6 6.7776 -1.8257 -11.7883 18 1 7.6406 -1.1624 -11.8460 19 6 6.1457 -2.0989 -13.1547 20 8 6.0557 -0.8773 -13.8907 21 6 5.7596 -1.4226 -10.7084 22 6 2.0512 -2.6863 -2.5777 23 7 1.6874 -4.1014 -2.8133 24 8 0.9838 -4.6907 -2.0124 25 8 2.0922 -4.6770 -3.8074 26 6 1.5965 -2.0344 -1.4481 27 1 -0.3933 0.4418 -0.7651 28 1 1.7923 -0.5139 0.8901 29 1 1.5881 2.4585 -1.2242 30 1 1.5616 2.4679 1.2085 31 1 2.9867 0.9962 -1.9670 32 1 3.8082 -0.1603 -3.9789 33 1 5.0124 -1.5537 -4.9750 34 1 3.5580 -1.0403 -5.8635 35 1 5.5988 -1.3418 -7.5972 36 1 4.7993 -3.4527 -9.2946 37 1 6.2542 -3.9668 -8.4072 38 1 6.3728 -3.9257 -11.2210 39 1 8.0818 -3.3888 -10.9214 40 1 5.1476 -2.5145 -13.0169 41 1 6.7626 -2.8097 -13.7046 42 1 5.6633 -0.9753 -14.7691 43 1 5.7819 -0.3612 -10.4618 44 1 4.7521 -1.7931 -10.8980 45 1 0.9754 -2.5579 -0.7363 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:36 Heat of formation + Delta-G solvation = -142.100211 kcal Electronic energy + Delta-G solvation = -33248.958309 eV Core-core repulsion = 28152.769155 eV Total energy + Delta-G solvation = -5096.189153 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.135 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.87002 -43.29636 -41.78637 -40.79509 -39.86254 -39.37061 -37.62438 -37.49284 -37.18331 -35.70378 -33.50211 -32.29716 -31.17213 -29.31364 -27.82421 -27.16520 -26.92673 -26.36384 -24.07964 -22.86088 -22.25490 -21.82984 -20.69013 -20.52538 -19.78059 -19.23656 -18.70916 -18.64359 -18.27077 -18.25491 -17.66253 -17.40443 -17.18417 -16.86241 -16.47762 -16.36412 -16.30752 -16.11374 -15.80962 -15.70383 -15.47712 -14.99818 -14.87210 -14.72701 -14.38244 -14.05140 -13.89090 -13.72026 -13.65129 -13.41376 -13.22886 -13.19473 -12.70564 -12.40454 -12.39154 -12.35952 -12.27532 -12.21433 -11.89010 -11.82027 -11.52721 -11.33123 -11.06091 -10.84321 -10.81436 -10.75787 -10.31575 -9.80764 -4.91833 -1.31437 -0.24864 0.15620 0.35005 1.15691 1.26267 1.40046 1.60423 2.01670 2.04520 2.24041 3.02586 3.10140 3.12195 3.13300 3.24719 3.34083 3.35400 3.44002 3.52076 3.62631 3.71136 3.76371 3.82905 3.91303 3.98145 4.24104 4.28768 4.35412 4.39125 4.45434 4.55464 4.56228 4.60796 4.63617 4.64181 4.72017 4.83577 4.84899 4.91658 4.98682 5.07125 5.16237 5.19919 5.38484 5.73378 6.31856 6.42052 6.44637 6.87829 7.04574 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.090 4.090 3 Si 0.788 3.212 4 C -0.147 4.147 5 C -0.004 4.004 6 C -0.189 4.189 7 C 0.193 3.807 8 O -0.291 6.291 9 C 0.025 3.975 10 C 0.511 3.489 11 O -0.561 6.561 12 N -0.710 5.710 13 C 0.115 3.885 14 C 0.084 3.916 15 F -0.195 7.195 16 C -0.138 4.138 17 C -0.114 4.114 18 H 0.087 0.913 19 C 0.082 3.918 20 O -0.598 6.598 21 C -0.139 4.139 22 C -0.104 4.104 23 N 0.034 4.966 24 O -0.203 6.203 25 O -0.172 6.172 26 C -0.003 4.003 27 H 0.389 0.611 28 H 0.128 0.872 29 H -0.261 1.261 30 H -0.309 1.309 31 H 0.188 0.812 32 H 0.205 0.795 33 H 0.144 0.856 34 H 0.145 0.855 35 H 0.420 0.580 36 H 0.095 0.905 37 H 0.072 0.928 38 H 0.122 0.878 39 H 0.088 0.912 40 H 0.063 0.937 41 H 0.056 0.944 42 H 0.397 0.603 43 H 0.083 0.917 44 H 0.114 0.886 45 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.458 11.051 -3.968 12.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.197 4.197 3 Si 0.691 3.309 4 C -0.149 4.149 5 C -0.022 4.022 6 C -0.208 4.208 7 C 0.144 3.856 8 O -0.201 6.201 9 C -0.052 4.052 10 C 0.297 3.703 11 O -0.439 6.439 12 N -0.365 5.365 13 C -0.009 4.009 14 C 0.065 3.935 15 F -0.176 7.176 16 C -0.176 4.176 17 C -0.133 4.133 18 H 0.106 0.894 19 C 0.005 3.995 20 O -0.407 6.407 21 C -0.177 4.177 22 C -0.189 4.189 23 N 0.544 4.456 24 O -0.410 6.410 25 O -0.386 6.386 26 C -0.022 4.022 27 H 0.239 0.761 28 H 0.145 0.855 29 H -0.187 1.187 30 H -0.238 1.238 31 H 0.205 0.795 32 H 0.222 0.778 33 H 0.162 0.838 34 H 0.162 0.838 35 H 0.258 0.742 36 H 0.114 0.886 37 H 0.090 0.910 38 H 0.141 0.859 39 H 0.106 0.894 40 H 0.082 0.918 41 H 0.075 0.925 42 H 0.247 0.753 43 H 0.102 0.898 44 H 0.132 0.868 45 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 5.493 11.391 -2.882 12.970 hybrid contribution -1.351 -0.967 -0.861 1.871 sum 4.141 10.424 -3.743 11.824 Atomic orbital electron populations 1.86635 1.18483 1.80448 1.50333 1.25505 0.83609 1.13014 0.97577 0.94167 0.89320 0.69998 0.77436 1.20375 1.02093 0.92564 0.99837 1.21712 0.89393 1.01278 0.89786 1.21802 1.06139 0.90469 1.02354 1.18960 0.89642 0.92061 0.84970 1.86460 1.63690 1.39685 1.30247 1.23091 0.98270 0.94424 0.89382 1.20456 0.78399 0.87678 0.83802 1.90856 1.54965 1.19957 1.78082 1.45509 1.51992 1.16907 1.22091 1.21825 0.99002 0.93466 0.86627 1.22078 0.86272 0.94186 0.90964 1.92856 1.60616 1.81053 1.83058 1.23585 1.04363 0.97657 0.91994 1.22490 0.99303 0.98068 0.93416 0.89431 1.22236 0.99913 0.85996 0.91372 1.86434 1.86339 1.33647 1.34260 1.23711 0.99305 1.01041 0.93612 1.20854 1.13300 0.81653 1.03088 1.43897 0.98258 1.03963 0.99474 1.94506 1.35891 1.68325 1.42311 1.94675 1.56436 1.69241 1.18294 1.20847 0.94145 0.94754 0.92435 0.76148 0.85463 1.18696 1.23760 0.79497 0.77807 0.83822 0.83803 0.74203 0.88638 0.91011 0.85938 0.89357 0.91835 0.92528 0.75309 0.89830 0.86790 0.83139 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.84 12.77 -148.98 -1.90 -1.06 16 2 C -0.09 0.58 2.82 71.23 0.20 0.78 16 3 Si 0.79 -7.90 29.78 68.60 2.04 -5.86 16 4 C -0.15 0.88 5.39 -19.85 -0.11 0.77 16 5 C 0.00 0.05 8.66 22.25 0.19 0.25 16 6 C -0.19 2.06 9.04 22.36 0.20 2.27 16 7 C 0.19 0.05 6.67 22.51 0.15 0.20 16 8 O -0.29 -1.19 7.68 -63.38 -0.49 -1.67 16 9 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 10 C 0.51 0.38 7.91 87.66 0.69 1.07 16 11 O -0.56 -7.69 16.50 16.00 0.26 -7.43 16 12 N -0.71 3.84 5.47 -463.05 -2.53 1.31 16 13 C 0.11 -0.43 5.37 86.38 0.46 0.03 16 14 C 0.08 -0.44 1.67 -10.27 -0.02 -0.46 16 15 F -0.20 0.23 16.80 44.97 0.76 0.99 16 16 C -0.14 0.90 7.10 31.12 0.22 1.12 16 17 C -0.11 0.50 3.99 -10.27 -0.04 0.46 16 18 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 19 C 0.08 -0.42 6.88 71.98 0.50 0.07 16 20 O -0.60 0.86 13.66 -148.98 -2.04 -1.18 16 21 C -0.14 0.89 7.08 31.12 0.22 1.11 16 22 C -0.10 -0.69 6.87 36.48 0.25 -0.44 16 23 N 0.03 0.56 4.45 -46.24 -0.21 0.35 16 24 O -0.20 -3.74 18.45 18.88 0.35 -3.39 16 25 O -0.17 -3.65 17.24 25.60 0.44 -3.21 16 26 C 0.00 0.00 9.11 22.25 0.20 0.20 16 27 H 0.39 -3.05 8.70 -74.05 -0.64 -3.70 16 28 H 0.13 -0.90 7.96 -2.38 -0.02 -0.92 16 29 H -0.26 2.30 7.11 99.48 0.71 3.01 16 30 H -0.31 -0.02 7.11 99.48 0.71 0.68 16 31 H 0.19 -3.61 4.87 -2.91 -0.01 -3.62 16 32 H 0.21 -4.22 6.30 -2.91 -0.02 -4.24 16 33 H 0.14 -2.24 7.66 -2.39 -0.02 -2.26 16 34 H 0.14 -2.30 7.66 -2.39 -0.02 -2.32 16 35 H 0.42 -4.87 8.19 -92.71 -0.76 -5.63 16 36 H 0.10 -0.38 7.94 -2.39 -0.02 -0.40 16 37 H 0.07 -0.05 8.14 -2.38 -0.02 -0.07 16 38 H 0.12 -1.19 8.06 -2.39 -0.02 -1.21 16 39 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 40 H 0.06 -0.51 7.84 -2.39 -0.02 -0.52 16 41 H 0.06 -0.37 8.14 -2.38 -0.02 -0.39 16 42 H 0.40 -3.77 9.12 -74.06 -0.68 -4.45 16 43 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 44 H 0.11 -0.97 7.72 -2.39 -0.02 -0.98 16 45 H 0.15 0.53 7.61 -2.91 -0.02 0.51 16 Total: 0.00 -40.41 391.12 -0.76 -41.17 By element: Atomic # 1 Polarization: -26.67 SS G_CDS: -0.95 Total: -27.62 kcal Atomic # 6 Polarization: 4.11 SS G_CDS: 3.50 Total: 7.61 kcal Atomic # 7 Polarization: 4.40 SS G_CDS: -2.74 Total: 1.66 kcal Atomic # 8 Polarization: -14.57 SS G_CDS: -3.37 Total: -17.94 kcal Atomic # 9 Polarization: 0.23 SS G_CDS: 0.76 Total: 0.99 kcal Atomic # 14 Polarization: -7.90 SS G_CDS: 2.04 Total: -5.86 kcal Total: -40.41 -0.76 -41.17 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.935 kcal (2) G-P(sol) polarization free energy of solvation -40.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.343 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.757 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds