Wall clock time and date at job start Sun Mar 7 2021 08:59:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.46970 * 2 1 4 4 C 1.50698 * 109.46965 * 240.00075 * 2 1 3 5 5 C 1.38268 * 119.94288 * 299.99997 * 4 2 1 6 6 C 1.38144 * 120.05726 * 180.02562 * 5 4 2 7 7 C 1.38739 * 119.93913 * 359.97438 * 6 5 4 8 8 O 1.35903 * 120.05307 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00079 * 180.02562 * 8 7 6 10 10 F 1.39892 * 109.47579 * 59.99432 * 9 8 7 11 11 F 1.39903 * 109.46422 * 299.99386 * 9 8 7 12 12 C 1.50695 * 109.47207 * 180.02562 * 9 8 7 13 13 O 1.21280 * 120.00143 * 359.97438 * 12 9 8 14 14 N 1.34777 * 120.00134 * 179.97438 * 12 9 8 15 15 C 1.46501 * 120.00100 * 179.97438 * 14 12 9 16 16 C 1.53002 * 109.47043 * 180.02562 * 15 14 12 17 17 F 1.39892 * 112.90983 * 48.74652 * 16 15 14 18 18 C 1.53783 * 113.61187 * 180.02562 * 16 15 14 19 19 C 1.53780 * 87.08037 * 139.97960 * 18 16 15 20 20 H 1.08994 * 113.61789 * 89.19805 * 19 18 16 21 21 C 1.52999 * 113.61172 * 220.01768 * 19 18 16 22 22 O 1.42903 * 109.47256 * 183.47236 * 21 19 18 23 23 C 1.53778 * 87.17445 * 334.60760 * 19 18 16 24 24 C 1.38730 * 119.89350 * 0.27859 * 7 6 5 25 25 C 1.38145 * 119.93961 * 359.46622 * 24 7 6 26 26 H 0.96693 * 113.99998 * 60.00007 * 1 2 3 27 27 H 1.09000 * 109.46943 * 120.00090 * 2 1 3 28 28 H 1.48501 * 110.00030 * 60.00113 * 3 2 1 29 29 H 1.48503 * 109.99868 * 181.32014 * 3 2 1 30 30 H 1.08001 * 119.97554 * 359.97396 * 5 4 2 31 31 H 1.07997 * 120.03365 * 179.97438 * 6 5 4 32 32 H 0.97000 * 120.00114 * 359.97438 * 14 12 9 33 33 H 1.08993 * 109.47492 * 59.99943 * 15 14 12 34 34 H 1.09006 * 109.46901 * 299.99913 * 15 14 12 35 35 H 1.08994 * 113.61896 * 25.42670 * 18 16 15 36 36 H 1.09003 * 113.60877 * 254.52370 * 18 16 15 37 37 H 1.08997 * 109.47286 * 63.46796 * 21 19 18 38 38 H 1.09008 * 109.47201 * 303.46576 * 21 19 18 39 39 H 0.96700 * 114.00311 * 180.02562 * 22 21 19 40 40 H 1.08994 * 113.61751 * 139.94120 * 23 19 18 41 41 H 1.09008 * 113.61216 * 270.84647 * 23 19 18 42 42 H 1.07996 * 120.03135 * 179.72640 * 24 7 6 43 43 H 1.07995 * 119.97458 * 180.23058 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0342 -1.4481 6 6 2.0561 -2.6878 -2.5750 7 6 2.8538 -2.0146 -3.4890 8 8 3.3068 -2.6553 -4.5986 9 6 4.1237 -1.9003 -5.4957 10 9 5.2680 -1.4575 -4.8238 11 9 3.4031 -0.7973 -5.9662 12 6 4.5280 -2.7688 -6.6588 13 8 4.1538 -3.9212 -6.7141 14 7 5.3054 -2.2652 -7.6378 15 6 5.6988 -3.1097 -8.7684 16 6 6.5734 -2.3013 -9.7288 17 9 7.6052 -1.6152 -9.0794 18 6 7.0416 -3.1005 -10.9564 19 6 6.7887 -1.8285 -11.7829 20 1 7.6521 -1.1658 -11.8396 21 6 6.1582 -2.1012 -13.1499 22 8 6.0370 -0.8740 -13.8720 23 6 5.7702 -1.4222 -10.7047 24 6 3.1926 -0.6880 -3.2657 25 6 2.7261 -0.0373 -2.1399 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5615 2.4678 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 0.9759 -2.5579 -0.7361 31 1 1.7947 -3.7219 -2.7444 32 1 5.6043 -1.3434 -7.5939 33 1 4.8072 -3.4551 -9.2916 34 1 6.2606 -3.9689 -8.4018 35 1 6.3820 -3.9283 -11.2161 36 1 8.0912 -3.3916 -10.9134 37 1 5.1704 -2.5414 -13.0132 38 1 6.7892 -2.7915 -13.7100 39 1 5.6437 -0.9714 -14.7500 40 1 5.7946 -0.3607 -10.4589 41 1 4.7621 -1.7905 -10.8955 42 1 3.8171 -0.1632 -3.9735 43 1 2.9865 0.9965 -1.9674 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:41 Heat of formation + Delta-G solvation = -235.412840 kcal Electronic energy + Delta-G solvation = -32627.154710 eV Core-core repulsion = 27419.027702 eV Total energy + Delta-G solvation = -5208.127008 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -50.82043 -49.02005 -48.79606 -41.38192 -41.06589 -40.01983 -39.21848 -37.41072 -37.23151 -36.06873 -32.42740 -32.01637 -31.03826 -28.95486 -27.38636 -27.12405 -26.09430 -24.42318 -22.83035 -22.48852 -22.31695 -20.96841 -20.52236 -19.95812 -19.61944 -18.56219 -18.45153 -17.77052 -17.55363 -17.21485 -17.14308 -16.82383 -16.65881 -16.36535 -16.27517 -16.17856 -15.80869 -15.69420 -15.51509 -15.40094 -15.27010 -15.12351 -15.03591 -14.96093 -14.43167 -14.35937 -14.28179 -14.15358 -13.98953 -13.71353 -13.57810 -13.41075 -12.97189 -12.60792 -12.35043 -12.13444 -12.09785 -11.86017 -11.76569 -11.58352 -11.46266 -11.03453 -10.70990 -10.48759 -10.15202 -9.51445 -5.06940 0.07750 0.19326 0.45575 0.67665 1.25963 1.59831 1.73991 1.94474 1.99367 2.50485 2.63135 2.78124 2.85003 2.92770 3.07724 3.27543 3.29939 3.41522 3.54796 3.56392 3.66517 3.75550 3.95298 4.09976 4.10942 4.19522 4.22298 4.25307 4.31149 4.35105 4.41540 4.43127 4.51186 4.57426 4.61155 4.72034 4.77403 4.83042 4.94850 5.08713 5.14436 5.37589 5.41015 5.67157 5.88809 6.32846 6.53436 6.54120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.686 3.314 4 C -0.142 4.142 5 C -0.056 4.056 6 C -0.126 4.126 7 C 0.106 3.894 8 O -0.286 6.286 9 C 0.433 3.567 10 F -0.173 7.173 11 F -0.173 7.173 12 C 0.518 3.482 13 O -0.467 6.467 14 N -0.702 5.702 15 C 0.112 3.888 16 C 0.078 3.922 17 F -0.181 7.181 18 C -0.140 4.140 19 C -0.108 4.108 20 H 0.106 0.894 21 C 0.085 3.915 22 O -0.573 6.573 23 C -0.147 4.147 24 C -0.186 4.186 25 C -0.078 4.078 26 H 0.380 0.620 27 H 0.116 0.884 28 H -0.253 1.253 29 H -0.257 1.257 30 H 0.140 0.860 31 H 0.141 0.859 32 H 0.414 0.586 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.107 0.893 36 H 0.092 0.908 37 H 0.050 0.950 38 H 0.051 0.949 39 H 0.383 0.617 40 H 0.087 0.913 41 H 0.104 0.896 42 H 0.136 0.864 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.315 0.888 -5.744 5.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.143 4.143 5 C -0.074 4.074 6 C -0.144 4.144 7 C 0.063 3.937 8 O -0.202 6.202 9 C 0.356 3.644 10 F -0.155 7.155 11 F -0.155 7.155 12 C 0.295 3.705 13 O -0.337 6.337 14 N -0.356 5.356 15 C -0.011 4.011 16 C 0.059 3.941 17 F -0.161 7.161 18 C -0.178 4.178 19 C -0.126 4.126 20 H 0.124 0.876 21 C 0.007 3.993 22 O -0.379 6.379 23 C -0.185 4.185 24 C -0.205 4.205 25 C -0.095 4.095 26 H 0.227 0.773 27 H 0.133 0.867 28 H -0.178 1.178 29 H -0.182 1.182 30 H 0.158 0.842 31 H 0.159 0.841 32 H 0.250 0.750 33 H 0.119 0.881 34 H 0.111 0.889 35 H 0.126 0.874 36 H 0.111 0.889 37 H 0.068 0.932 38 H 0.069 0.931 39 H 0.230 0.770 40 H 0.106 0.894 41 H 0.122 0.878 42 H 0.154 0.846 43 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 0.262 0.408 -4.294 4.321 hybrid contribution 0.321 0.022 -0.237 0.399 sum 0.583 0.430 -4.531 4.588 Atomic orbital electron populations 1.86505 1.17002 1.81685 1.49309 1.25006 0.85295 1.10007 0.97258 0.94754 0.81034 0.78073 0.87328 1.20376 1.00631 0.95507 0.97759 1.20890 0.97163 0.93465 0.95875 1.20538 0.99139 1.01229 0.93525 1.18983 0.96455 0.91775 0.86458 1.86666 1.63428 1.38368 1.31764 1.21732 0.76826 0.79419 0.86464 1.93202 1.50855 1.89859 1.81562 1.93198 1.78188 1.55570 1.88533 1.19273 0.80957 0.87639 0.82585 1.90883 1.51908 1.15625 1.75328 1.45601 1.50864 1.17042 1.22134 1.22060 0.99549 0.93593 0.85851 1.22131 0.86711 0.94283 0.90966 1.92902 1.59915 1.80689 1.82638 1.23549 1.04197 0.97587 0.92482 1.22503 0.99644 0.97724 0.92773 0.87573 1.22132 0.99001 0.86299 0.91821 1.86486 1.86008 1.31921 1.33470 1.23774 0.99067 1.01431 0.94202 1.21476 1.04499 0.93626 1.00869 1.20807 0.96319 0.99358 0.93033 0.77290 0.86707 1.17791 1.18224 0.84218 0.84130 0.74980 0.88118 0.88937 0.87416 0.88911 0.93177 0.93081 0.76980 0.89390 0.87767 0.84603 0.84858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.03 12.77 -35.23 -0.45 -0.48 16 2 C -0.06 0.02 2.82 36.00 0.10 0.12 16 3 Si 0.69 -0.69 29.78 -169.99 -5.06 -5.75 16 4 C -0.14 -0.05 5.39 -104.60 -0.56 -0.62 16 5 C -0.06 -0.04 9.60 -39.60 -0.38 -0.42 16 6 C -0.13 -0.20 9.99 -39.43 -0.39 -0.59 16 7 C 0.11 0.28 6.48 -39.21 -0.25 0.03 16 8 O -0.29 -1.01 9.60 -39.35 -0.38 -1.39 16 9 C 0.43 0.78 2.05 36.00 0.07 0.86 16 10 F -0.17 -0.27 15.28 2.25 0.03 -0.24 16 11 F -0.17 -0.16 15.31 2.25 0.03 -0.12 16 12 C 0.52 0.87 7.34 -10.99 -0.08 0.79 16 13 O -0.47 -2.16 16.50 -14.35 -0.24 -2.40 16 14 N -0.70 0.77 5.47 -60.29 -0.33 0.44 16 15 C 0.11 -0.26 5.37 -4.04 -0.02 -0.28 16 16 C 0.08 -0.20 1.67 -89.71 -0.15 -0.35 16 17 F -0.18 0.01 16.79 2.25 0.04 0.04 16 18 C -0.14 0.51 7.10 -25.92 -0.18 0.33 16 19 C -0.11 0.25 3.98 -89.81 -0.36 -0.11 16 20 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 21 C 0.09 -0.22 6.87 37.16 0.26 0.03 16 22 O -0.57 0.42 13.66 -35.23 -0.48 -0.06 16 23 C -0.15 0.41 7.09 -25.83 -0.18 0.23 16 24 C -0.19 -0.29 8.26 -39.43 -0.33 -0.62 16 25 C -0.08 -0.03 8.66 -39.60 -0.34 -0.37 16 26 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 27 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 28 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 29 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 30 H 0.14 -0.06 8.06 -52.49 -0.42 -0.49 16 31 H 0.14 0.06 8.06 -52.49 -0.42 -0.36 16 32 H 0.41 -1.03 8.19 -40.82 -0.33 -1.36 16 33 H 0.10 -0.34 7.95 -51.93 -0.41 -0.75 16 34 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.11 -0.58 8.06 -51.93 -0.42 -1.00 16 36 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.05 -0.19 7.87 -51.93 -0.41 -0.60 16 38 H 0.05 -0.17 8.14 -51.92 -0.42 -0.60 16 39 H 0.38 -1.83 9.12 45.56 0.42 -1.41 16 40 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.10 -0.40 7.75 -51.92 -0.40 -0.81 16 42 H 0.14 0.11 5.10 -52.49 -0.27 -0.16 16 43 H 0.13 -0.23 4.87 -52.49 -0.26 -0.48 16 LS Contribution 374.44 15.07 5.64 5.64 Total: 0.00 -9.04 374.44 -8.25 -17.30 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -4.26 Total: -12.01 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -2.81 Total: -0.98 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -0.33 Total: 0.44 kcal Atomic # 8 Polarization: -2.78 SS G_CDS: -1.55 Total: -4.33 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.11 Total: -0.32 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.06 Total: -5.75 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -9.04 -8.25 -17.30 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -218.116 kcal (2) G-P(sol) polarization free energy of solvation -9.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.158 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.297 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.413 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds