Wall clock time and date at job start Sun Mar 7 2021 08:59:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86295 * 109.46970 * 2 1 4 4 C 1.50698 * 109.46965 * 240.00075 * 2 1 3 5 5 C 1.38268 * 119.94288 * 299.99997 * 4 2 1 6 6 C 1.38144 * 120.05726 * 180.02562 * 5 4 2 7 7 C 1.38739 * 119.93913 * 359.97438 * 6 5 4 8 8 O 1.35903 * 120.05307 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00079 * 180.02562 * 8 7 6 10 10 F 1.39892 * 109.47579 * 59.99432 * 9 8 7 11 11 F 1.39903 * 109.46422 * 299.99386 * 9 8 7 12 12 C 1.50695 * 109.47207 * 180.02562 * 9 8 7 13 13 O 1.21280 * 120.00143 * 359.97438 * 12 9 8 14 14 N 1.34777 * 120.00134 * 179.97438 * 12 9 8 15 15 C 1.46501 * 120.00100 * 179.97438 * 14 12 9 16 16 C 1.53002 * 109.47043 * 180.02562 * 15 14 12 17 17 F 1.39892 * 112.90983 * 48.74652 * 16 15 14 18 18 C 1.53783 * 113.61187 * 180.02562 * 16 15 14 19 19 C 1.53780 * 87.08037 * 139.97960 * 18 16 15 20 20 H 1.08994 * 113.61789 * 89.19805 * 19 18 16 21 21 C 1.52999 * 113.61172 * 220.01768 * 19 18 16 22 22 O 1.42903 * 109.47256 * 183.47236 * 21 19 18 23 23 C 1.53778 * 87.17445 * 334.60760 * 19 18 16 24 24 C 1.38730 * 119.89350 * 0.27859 * 7 6 5 25 25 C 1.38145 * 119.93961 * 359.46622 * 24 7 6 26 26 H 0.96693 * 113.99998 * 60.00007 * 1 2 3 27 27 H 1.09000 * 109.46943 * 120.00090 * 2 1 3 28 28 H 1.48501 * 110.00030 * 60.00113 * 3 2 1 29 29 H 1.48503 * 109.99868 * 181.32014 * 3 2 1 30 30 H 1.08001 * 119.97554 * 359.97396 * 5 4 2 31 31 H 1.07997 * 120.03365 * 179.97438 * 6 5 4 32 32 H 0.97000 * 120.00114 * 359.97438 * 14 12 9 33 33 H 1.08993 * 109.47492 * 59.99943 * 15 14 12 34 34 H 1.09006 * 109.46901 * 299.99913 * 15 14 12 35 35 H 1.08994 * 113.61896 * 25.42670 * 18 16 15 36 36 H 1.09003 * 113.60877 * 254.52370 * 18 16 15 37 37 H 1.08997 * 109.47286 * 63.46796 * 21 19 18 38 38 H 1.09008 * 109.47201 * 303.46576 * 21 19 18 39 39 H 0.96700 * 114.00311 * 180.02562 * 22 21 19 40 40 H 1.08994 * 113.61751 * 139.94120 * 23 19 18 41 41 H 1.09008 * 113.61216 * 270.84647 * 23 19 18 42 42 H 1.07996 * 120.03135 * 179.72640 * 24 7 6 43 43 H 1.07995 * 119.97458 * 180.23058 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0342 -1.4481 6 6 2.0561 -2.6878 -2.5750 7 6 2.8538 -2.0146 -3.4890 8 8 3.3068 -2.6553 -4.5986 9 6 4.1237 -1.9003 -5.4957 10 9 5.2680 -1.4575 -4.8238 11 9 3.4031 -0.7973 -5.9662 12 6 4.5280 -2.7688 -6.6588 13 8 4.1538 -3.9212 -6.7141 14 7 5.3054 -2.2652 -7.6378 15 6 5.6988 -3.1097 -8.7684 16 6 6.5734 -2.3013 -9.7288 17 9 7.6052 -1.6152 -9.0794 18 6 7.0416 -3.1005 -10.9564 19 6 6.7887 -1.8285 -11.7829 20 1 7.6521 -1.1658 -11.8396 21 6 6.1582 -2.1012 -13.1499 22 8 6.0370 -0.8740 -13.8720 23 6 5.7702 -1.4222 -10.7047 24 6 3.1926 -0.6880 -3.2657 25 6 2.7261 -0.0373 -2.1399 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5615 2.4678 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 0.9759 -2.5579 -0.7361 31 1 1.7947 -3.7219 -2.7444 32 1 5.6043 -1.3434 -7.5939 33 1 4.8072 -3.4551 -9.2916 34 1 6.2606 -3.9689 -8.4018 35 1 6.3820 -3.9283 -11.2161 36 1 8.0912 -3.3916 -10.9134 37 1 5.1704 -2.5414 -13.0132 38 1 6.7892 -2.7915 -13.7100 39 1 5.6437 -0.9714 -14.7500 40 1 5.7946 -0.3607 -10.4589 41 1 4.7621 -1.7905 -10.8955 42 1 3.8171 -0.1632 -3.9735 43 1 2.9865 0.9965 -1.9674 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:40 Heat of formation + Delta-G solvation = -237.035221 kcal Electronic energy + Delta-G solvation = -32627.225062 eV Core-core repulsion = 27419.027702 eV Total energy + Delta-G solvation = -5208.197360 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.93335 -48.92893 -48.90496 -41.48050 -41.13754 -39.84786 -39.28801 -37.31355 -37.19548 -36.06715 -32.48135 -32.06894 -30.96823 -28.93714 -27.20858 -26.94714 -26.10224 -24.47036 -22.85229 -22.39581 -22.35520 -20.81922 -20.55775 -20.00980 -19.73928 -18.57685 -18.27925 -17.77877 -17.54363 -17.21660 -17.05933 -16.83988 -16.55025 -16.34518 -16.21993 -16.17499 -15.86010 -15.73900 -15.46506 -15.42821 -15.38235 -15.14722 -15.06115 -14.90122 -14.43263 -14.37537 -14.34275 -14.24537 -13.85288 -13.61270 -13.43588 -13.22200 -13.04370 -12.42926 -12.40306 -12.16085 -12.00639 -11.86925 -11.72416 -11.40192 -11.38613 -10.81772 -10.68031 -10.47821 -10.20823 -9.59823 -5.01657 -0.00213 0.13903 0.39048 0.56159 1.29634 1.61403 1.63589 1.92634 1.94851 2.44374 2.64058 2.99870 3.04909 3.11974 3.18188 3.31396 3.47754 3.50312 3.53030 3.63643 3.73439 3.81466 4.07366 4.17772 4.19597 4.33648 4.38599 4.39365 4.48559 4.50337 4.58356 4.61587 4.64682 4.74138 4.81145 4.83859 4.88384 4.94316 4.98327 5.02738 5.32821 5.35797 5.35864 5.67232 5.81652 6.30424 6.76637 6.89710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.068 4.068 3 Si 0.770 3.230 4 C -0.141 4.141 5 C -0.058 4.058 6 C -0.134 4.134 7 C 0.085 3.915 8 O -0.303 6.303 9 C 0.434 3.566 10 F -0.173 7.173 11 F -0.169 7.169 12 C 0.520 3.480 13 O -0.502 6.502 14 N -0.688 5.688 15 C 0.110 3.890 16 C 0.076 3.924 17 F -0.198 7.198 18 C -0.130 4.130 19 C -0.115 4.115 20 H 0.084 0.916 21 C 0.083 3.917 22 O -0.600 6.600 23 C -0.144 4.144 24 C -0.194 4.194 25 C -0.078 4.078 26 H 0.396 0.604 27 H 0.112 0.888 28 H -0.297 1.297 29 H -0.286 1.286 30 H 0.150 0.850 31 H 0.146 0.854 32 H 0.421 0.579 33 H 0.117 0.883 34 H 0.092 0.908 35 H 0.131 0.869 36 H 0.090 0.910 37 H 0.067 0.933 38 H 0.058 0.942 39 H 0.397 0.603 40 H 0.077 0.923 41 H 0.120 0.880 42 H 0.141 0.859 43 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.787 0.910 -6.249 6.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.178 4.178 3 Si 0.677 3.323 4 C -0.142 4.142 5 C -0.076 4.076 6 C -0.153 4.153 7 C 0.042 3.958 8 O -0.220 6.220 9 C 0.357 3.643 10 F -0.155 7.155 11 F -0.150 7.150 12 C 0.298 3.702 13 O -0.375 6.375 14 N -0.342 5.342 15 C -0.012 4.012 16 C 0.058 3.942 17 F -0.178 7.178 18 C -0.168 4.168 19 C -0.134 4.134 20 H 0.103 0.897 21 C 0.005 3.995 22 O -0.408 6.408 23 C -0.182 4.182 24 C -0.212 4.212 25 C -0.095 4.095 26 H 0.246 0.754 27 H 0.130 0.870 28 H -0.225 1.225 29 H -0.213 1.213 30 H 0.168 0.832 31 H 0.164 0.836 32 H 0.258 0.742 33 H 0.135 0.865 34 H 0.110 0.890 35 H 0.149 0.851 36 H 0.109 0.891 37 H 0.085 0.915 38 H 0.076 0.924 39 H 0.247 0.753 40 H 0.096 0.904 41 H 0.138 0.862 42 H 0.158 0.842 43 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -0.210 0.444 -4.849 4.874 hybrid contribution 0.474 0.064 -0.065 0.482 sum 0.264 0.508 -4.914 4.947 Atomic orbital electron populations 1.86472 1.16995 1.82129 1.50547 1.25101 0.85405 1.10504 0.96780 0.93771 0.77896 0.75611 0.85036 1.20497 1.00326 0.95459 0.97873 1.21054 0.97083 0.93732 0.95707 1.20710 0.99186 1.01666 0.93715 1.19245 0.97370 0.92456 0.86703 1.86640 1.63841 1.39221 1.32289 1.21728 0.76724 0.79527 0.86361 1.93197 1.50816 1.89855 1.81611 1.93202 1.78091 1.55286 1.88427 1.19288 0.80992 0.87158 0.82793 1.90862 1.53595 1.16894 1.76158 1.45631 1.49439 1.17489 1.21631 1.22232 1.00210 0.93358 0.85429 1.22247 0.86371 0.94536 0.91072 1.92868 1.60768 1.81156 1.83045 1.23568 1.04657 0.97565 0.91004 1.22486 0.99130 0.98183 0.93554 0.89727 1.22241 1.00007 0.85842 0.91379 1.86442 1.86399 1.33235 1.34771 1.23802 0.99716 1.00868 0.93767 1.21607 1.04754 0.93399 1.01468 1.21022 0.95834 1.00223 0.92468 0.75398 0.87039 1.22499 1.21290 0.83189 0.83617 0.74153 0.86547 0.88987 0.85089 0.89107 0.91506 0.92356 0.75287 0.90400 0.86203 0.84181 0.82965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.37 12.77 -148.98 -1.90 -1.53 16 2 C -0.07 0.08 2.82 71.24 0.20 0.28 16 3 Si 0.77 -1.86 29.78 68.60 2.04 0.19 16 4 C -0.14 -0.05 5.39 -19.85 -0.11 -0.15 16 5 C -0.06 -0.08 9.60 22.25 0.21 0.14 16 6 C -0.13 -0.50 9.99 22.37 0.22 -0.28 16 7 C 0.08 0.52 6.48 22.51 0.15 0.66 16 8 O -0.30 -2.49 9.60 -73.42 -0.71 -3.19 16 9 C 0.43 1.89 2.05 71.23 0.15 2.03 16 10 F -0.17 -0.65 15.28 44.97 0.69 0.03 16 11 F -0.17 -0.37 15.31 44.97 0.69 0.32 16 12 C 0.52 2.06 7.34 87.66 0.64 2.70 16 13 O -0.50 -5.09 16.50 16.01 0.26 -4.82 16 14 N -0.69 1.44 5.47 -463.06 -2.53 -1.10 16 15 C 0.11 -0.56 5.37 86.38 0.46 -0.09 16 16 C 0.08 -0.40 1.67 -10.21 -0.02 -0.42 16 17 F -0.20 -0.10 16.79 44.97 0.76 0.66 16 18 C -0.13 1.03 7.10 31.12 0.22 1.25 16 19 C -0.12 0.53 3.98 -10.27 -0.04 0.49 16 20 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 21 C 0.08 -0.49 6.87 71.98 0.49 0.01 16 22 O -0.60 0.88 13.66 -148.98 -2.04 -1.15 16 23 C -0.14 0.84 7.09 31.18 0.22 1.06 16 24 C -0.19 -0.65 8.26 22.37 0.18 -0.46 16 25 C -0.08 -0.02 8.66 22.25 0.19 0.18 16 26 H 0.40 -3.37 8.70 -74.06 -0.64 -4.01 16 27 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 28 H -0.30 -1.50 7.11 99.48 0.71 -0.79 16 29 H -0.29 -0.69 7.11 99.48 0.71 0.02 16 30 H 0.15 -0.18 8.06 -2.91 -0.02 -0.20 16 31 H 0.15 0.26 8.06 -2.91 -0.02 0.23 16 32 H 0.42 -2.03 8.19 -92.71 -0.76 -2.79 16 33 H 0.12 -0.91 7.95 -2.39 -0.02 -0.93 16 34 H 0.09 -0.40 8.14 -2.38 -0.02 -0.42 16 35 H 0.13 -1.65 8.06 -2.39 -0.02 -1.67 16 36 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 37 H 0.07 -0.62 7.87 -2.39 -0.02 -0.64 16 38 H 0.06 -0.44 8.14 -2.38 -0.02 -0.46 16 39 H 0.40 -3.83 9.12 -74.06 -0.68 -4.51 16 40 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 41 H 0.12 -1.08 7.75 -2.38 -0.02 -1.10 16 42 H 0.14 0.25 5.10 -2.91 -0.01 0.23 16 43 H 0.15 -0.67 4.87 -2.91 -0.01 -0.68 16 Total: 0.00 -21.50 374.44 -0.48 -21.99 By element: Atomic # 1 Polarization: -17.85 SS G_CDS: -0.93 Total: -18.78 kcal Atomic # 6 Polarization: 4.20 SS G_CDS: 3.19 Total: 7.39 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -2.53 Total: -1.10 kcal Atomic # 8 Polarization: -6.32 SS G_CDS: -4.38 Total: -10.70 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 2.13 Total: 1.01 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: 2.04 Total: 0.19 kcal Total: -21.50 -0.48 -21.99 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -215.049 kcal (2) G-P(sol) polarization free energy of solvation -21.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -236.553 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.986 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds