Wall clock time and date at job start Sun Mar 7 2021 08:59:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35983 * 116.99876 * 2 1 4 4 C 1.38677 * 119.99933 * 179.97438 * 3 2 1 5 5 C 1.38146 * 119.99634 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.99848 * 179.97438 * 5 4 3 7 7 O 1.42907 * 109.46918 * 255.02086 * 6 5 4 8 8 Si 1.86305 * 109.47102 * 15.01686 * 6 5 4 9 9 C 1.38674 * 120.00478 * 0.02562 * 5 4 3 10 10 O 1.35990 * 120.00150 * 180.02562 * 9 5 4 11 11 C 1.42897 * 116.99668 * 180.02562 * 10 9 5 12 12 C 1.50697 * 109.46923 * 179.97438 * 11 10 9 13 13 O 1.21278 * 119.99801 * 359.97438 * 12 11 10 14 14 N 1.34775 * 119.99976 * 180.02562 * 12 11 10 15 15 C 1.46508 * 120.00062 * 179.97438 * 14 12 11 16 16 C 1.52990 * 109.47163 * 179.97438 * 15 14 12 17 17 F 1.39902 * 112.90652 * 48.75287 * 16 15 14 18 18 C 1.53786 * 113.61464 * 179.97438 * 16 15 14 19 19 C 1.53781 * 87.17350 * 140.02626 * 18 16 15 20 20 H 1.08999 * 113.61567 * 89.07405 * 19 18 16 21 21 C 1.52995 * 113.61503 * 219.89414 * 19 18 16 22 22 O 1.42898 * 109.47243 * 185.00084 * 21 19 18 23 23 C 1.53781 * 87.08070 * 334.52830 * 19 18 16 24 24 C 1.38720 * 119.99955 * 0.27387 * 9 5 4 25 25 C 1.38116 * 119.99500 * 359.44919 * 24 9 5 26 26 H 1.08995 * 109.47187 * 60.00666 * 1 2 3 27 27 H 1.09005 * 109.46675 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47487 * 299.99840 * 1 2 3 29 29 H 1.07999 * 119.99680 * 0.04065 * 4 3 2 30 30 H 1.08998 * 109.47424 * 135.02328 * 6 5 4 31 31 H 0.96694 * 113.99773 * 299.99647 * 7 6 5 32 32 H 1.48496 * 109.99833 * 60.00504 * 8 6 5 33 33 H 1.48505 * 109.99704 * 181.32134 * 8 6 5 34 34 H 1.09000 * 109.47827 * 59.99615 * 11 10 9 35 35 H 1.09006 * 109.46938 * 299.99668 * 11 10 9 36 36 H 0.96997 * 120.00270 * 359.97438 * 14 12 11 37 37 H 1.09004 * 109.46414 * 59.99707 * 15 14 12 38 38 H 1.08997 * 109.47134 * 300.00088 * 15 14 12 39 39 H 1.09002 * 113.61357 * 25.43543 * 18 16 15 40 40 H 1.09002 * 113.61608 * 254.61705 * 18 16 15 41 41 H 1.09000 * 109.47188 * 305.00387 * 21 19 18 42 42 H 1.09001 * 109.47254 * 65.00150 * 21 19 18 43 43 H 0.96705 * 114.00424 * 180.02562 * 22 21 19 44 44 H 1.09005 * 113.61471 * 139.98321 * 23 19 18 45 45 H 1.09003 * 113.61469 * 270.88099 * 23 19 18 46 46 H 1.07996 * 120.00061 * 179.70776 * 24 9 5 47 47 H 1.08006 * 119.99468 * 180.25447 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 0.0005 5 6 4.0583 2.5152 0.0011 6 6 5.5633 2.5941 0.0022 7 8 6.0197 2.9668 1.3042 8 14 6.2726 0.9325 -0.4524 9 6 3.3030 3.6782 0.0016 10 8 3.9204 4.8899 0.0016 11 6 3.0804 6.0459 0.0027 12 6 3.9345 7.2874 0.0032 13 8 5.1435 7.1917 0.0031 14 7 3.3549 8.5041 0.0048 15 6 4.1852 9.7112 0.0058 16 6 3.2859 10.9489 0.0069 17 9 2.2785 10.8891 0.9758 18 6 4.0637 12.2755 0.0087 19 6 3.0103 12.8065 -0.9778 20 1 2.1499 13.2667 -0.4920 21 6 3.5972 13.6741 -2.0930 22 8 2.5371 14.2128 -2.8854 23 6 2.7749 11.3442 -1.3916 24 6 1.9178 3.6056 0.0074 25 6 1.2908 2.3749 0.0010 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8899 29 1 4.0194 0.3784 0.0003 30 1 5.8886 3.3391 -0.7238 31 1 5.6888 3.8235 1.6066 32 1 5.8055 0.5335 -1.8043 33 1 7.7564 0.9886 -0.4237 34 1 2.4517 6.0375 0.8932 35 1 2.4504 6.0381 -0.8868 36 1 2.3879 8.5807 0.0053 37 1 4.8141 9.7201 -0.8845 38 1 4.8148 9.7183 0.8955 39 1 5.0628 12.1965 -0.4201 40 1 4.0557 12.7851 0.9722 41 1 4.1733 14.4889 -1.6544 42 1 4.2481 13.0664 -2.7217 43 1 2.8365 14.7744 -3.6136 44 1 1.7255 11.1010 -1.5580 45 1 3.4216 11.0106 -2.2031 46 1 1.3296 4.5113 0.0125 47 1 0.2122 2.3185 0.0014 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:51 Heat of formation + Delta-G solvation = -183.214089 kcal Electronic energy + Delta-G solvation = -31467.367516 eV Core-core repulsion = 26726.192156 eV Total energy + Delta-G solvation = -4741.175360 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.156 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -48.90583 -41.84796 -40.94271 -40.00884 -39.66169 -38.15384 -37.22266 -36.94108 -35.73777 -32.83884 -31.52191 -30.56146 -29.12437 -27.98793 -27.12452 -26.74996 -26.59447 -23.76033 -22.42720 -22.28541 -21.79488 -20.69942 -19.55972 -18.83379 -18.76872 -18.29323 -18.08386 -17.61554 -17.49064 -17.36291 -16.89082 -16.61136 -16.46786 -16.38099 -16.08780 -15.76108 -15.73576 -15.48299 -15.42757 -15.05794 -14.89985 -14.47752 -14.36612 -14.13043 -14.11456 -13.81375 -13.55270 -13.48103 -13.40471 -13.22847 -13.05753 -12.53937 -12.40769 -12.30838 -12.03959 -11.91845 -11.57115 -11.46482 -11.36214 -11.31076 -11.24276 -11.05430 -10.83962 -10.36191 -10.11072 -8.83877 -4.93434 0.05173 0.31797 1.32951 1.34231 1.36168 1.57992 1.91109 2.33294 2.47966 2.53646 3.00288 3.08438 3.10602 3.31063 3.42953 3.50906 3.54971 3.71910 3.79737 3.84709 3.91677 4.01445 4.07925 4.11657 4.20379 4.20590 4.26682 4.32593 4.41979 4.44267 4.44743 4.51828 4.57553 4.60514 4.68695 4.69070 4.79212 4.81596 4.87774 4.95369 4.96308 5.10836 5.13044 5.19518 5.34867 5.40094 6.07559 6.28795 6.43135 6.51101 6.86008 6.97309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.811 3.189 9 C 0.089 3.911 10 O -0.315 6.315 11 C 0.038 3.962 12 C 0.517 3.483 13 O -0.566 6.566 14 N -0.712 5.712 15 C 0.116 3.884 16 C 0.081 3.919 17 F -0.197 7.197 18 C -0.136 4.136 19 C -0.114 4.114 20 H 0.086 0.914 21 C 0.083 3.917 22 O -0.598 6.598 23 C -0.140 4.140 24 C -0.160 4.160 25 C -0.162 4.162 26 H 0.066 0.934 27 H 0.115 0.885 28 H 0.067 0.933 29 H 0.153 0.847 30 H 0.063 0.937 31 H 0.372 0.628 32 H -0.264 1.264 33 H -0.294 1.294 34 H 0.124 0.876 35 H 0.124 0.876 36 H 0.418 0.582 37 H 0.097 0.903 38 H 0.074 0.926 39 H 0.124 0.876 40 H 0.088 0.912 41 H 0.058 0.942 42 H 0.064 0.936 43 H 0.397 0.603 44 H 0.080 0.920 45 H 0.114 0.886 46 H 0.166 0.834 47 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.764 2.924 -1.757 7.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.119 4.119 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.712 3.288 9 C 0.044 3.956 10 O -0.229 6.229 11 C -0.040 4.040 12 C 0.303 3.697 13 O -0.444 6.444 14 N -0.366 5.366 15 C -0.008 4.008 16 C 0.063 3.937 17 F -0.177 7.177 18 C -0.174 4.174 19 C -0.133 4.133 20 H 0.105 0.895 21 C 0.005 3.995 22 O -0.407 6.407 23 C -0.178 4.178 24 C -0.179 4.179 25 C -0.180 4.180 26 H 0.084 0.916 27 H 0.133 0.867 28 H 0.085 0.915 29 H 0.170 0.830 30 H 0.080 0.920 31 H 0.220 0.780 32 H -0.189 1.189 33 H -0.221 1.221 34 H 0.142 0.858 35 H 0.141 0.859 36 H 0.256 0.744 37 H 0.115 0.885 38 H 0.092 0.908 39 H 0.142 0.858 40 H 0.107 0.893 41 H 0.076 0.924 42 H 0.082 0.918 43 H 0.247 0.753 44 H 0.099 0.901 45 H 0.133 0.867 46 H 0.183 0.817 47 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -5.221 1.383 -1.903 5.726 hybrid contribution -0.779 2.449 -0.521 2.623 sum -6.000 3.833 -2.424 7.521 Atomic orbital electron populations 1.23356 0.76386 1.05633 1.02345 1.86088 1.23382 1.26281 1.88916 1.18978 0.91955 0.85335 0.99129 1.20187 0.92403 0.96804 1.04207 1.19455 0.96057 0.90939 1.05429 1.25528 0.92775 1.12582 0.88007 1.86661 1.74221 1.42262 1.31963 0.92200 0.76254 0.79046 0.81298 1.18796 0.91709 0.84228 1.00864 1.86077 1.35419 1.11874 1.89488 1.22679 0.92600 0.81885 1.06822 1.20456 0.88324 0.85169 0.75771 1.90775 1.16398 1.87287 1.49903 1.45565 1.11549 1.04330 1.75201 1.21835 0.93124 0.81587 1.04300 1.22161 0.87286 0.95810 0.88493 1.92857 1.62363 1.97327 1.65158 1.23577 0.99743 0.92861 1.01212 1.22483 0.99352 0.95065 0.96361 0.89518 1.22229 0.88806 0.96553 0.91881 1.86437 1.36140 1.70214 1.47930 1.23763 1.03621 0.95356 0.95017 1.21368 0.92105 1.00007 1.04373 1.21418 1.01594 0.90935 1.04079 0.91556 0.86698 0.91450 0.82981 0.91971 0.78002 1.18936 1.22130 0.85826 0.85882 0.74443 0.88530 0.90798 0.85776 0.89313 0.92403 0.91795 0.75280 0.90092 0.86741 0.81698 0.82164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.76 10.50 -93.36 -0.98 -1.74 16 3 C 0.09 0.26 6.69 22.49 0.15 0.41 16 4 C -0.12 -0.53 8.59 22.35 0.19 -0.34 16 5 C -0.12 -0.72 5.27 -19.78 -0.10 -0.82 16 6 C -0.08 -0.66 2.33 71.24 0.17 -0.50 16 7 O -0.54 -5.40 12.65 -148.98 -1.89 -7.29 16 8 Si 0.81 4.26 30.17 68.60 2.07 6.33 16 9 C 0.09 0.33 6.62 22.49 0.15 0.48 16 10 O -0.31 -1.47 8.56 -74.40 -0.64 -2.10 16 11 C 0.04 -0.14 5.22 71.24 0.37 0.24 16 12 C 0.52 0.98 7.91 87.66 0.69 1.68 16 13 O -0.57 -7.05 16.50 16.02 0.26 -6.78 16 14 N -0.71 2.60 5.47 -463.06 -2.53 0.07 16 15 C 0.12 -0.36 5.37 86.37 0.46 0.11 16 16 C 0.08 -0.35 1.68 -10.18 -0.02 -0.37 16 17 F -0.20 -0.06 16.80 44.97 0.76 0.69 16 18 C -0.14 0.83 7.09 31.12 0.22 1.05 16 19 C -0.11 0.42 3.98 -10.27 -0.04 0.37 16 20 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 21 C 0.08 -0.39 6.89 71.98 0.50 0.10 16 22 O -0.60 0.54 13.66 -148.98 -2.03 -1.49 16 23 C -0.14 0.74 7.09 31.21 0.22 0.96 16 24 C -0.16 0.30 9.03 22.36 0.20 0.50 16 25 C -0.16 0.24 9.03 22.35 0.20 0.44 16 26 H 0.07 -0.51 7.66 -2.39 -0.02 -0.53 16 27 H 0.11 -0.95 8.14 -2.38 -0.02 -0.97 16 28 H 0.07 -0.52 7.66 -2.39 -0.02 -0.54 16 29 H 0.15 0.25 5.13 -2.91 -0.01 0.23 16 30 H 0.06 0.65 7.82 -2.39 -0.02 0.63 16 31 H 0.37 2.77 8.60 -74.06 -0.64 2.14 16 32 H -0.26 -1.88 7.11 99.48 0.71 -1.17 16 33 H -0.29 -3.38 7.11 99.48 0.71 -2.67 16 34 H 0.12 -1.16 7.65 -2.39 -0.02 -1.18 16 35 H 0.12 -1.18 7.67 -2.38 -0.02 -1.19 16 36 H 0.42 -3.62 8.19 -92.71 -0.76 -4.38 16 37 H 0.10 -0.36 7.95 -2.38 -0.02 -0.38 16 38 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.12 -1.20 8.06 -2.39 -0.02 -1.22 16 40 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 41 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 42 H 0.06 -0.49 7.85 -2.39 -0.02 -0.51 16 43 H 0.40 -3.61 9.12 -74.05 -0.68 -4.29 16 44 H 0.08 -0.33 8.14 -2.38 -0.02 -0.35 16 45 H 0.11 -0.87 7.73 -2.39 -0.02 -0.89 16 46 H 0.17 -1.51 6.29 -2.91 -0.02 -1.53 16 47 H 0.16 -1.15 6.29 -2.91 -0.02 -1.17 16 Total: 0.00 -26.41 393.64 -1.49 -27.91 By element: Atomic # 1 Polarization: -19.92 SS G_CDS: -0.99 Total: -20.91 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: 4.48 Total: 5.32 kcal Atomic # 7 Polarization: 2.60 SS G_CDS: -2.53 Total: 0.07 kcal Atomic # 8 Polarization: -14.14 SS G_CDS: -5.27 Total: -19.41 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.76 Total: 0.69 kcal Atomic # 14 Polarization: 4.26 SS G_CDS: 2.07 Total: 6.33 kcal Total: -26.41 -1.49 -27.91 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.308 kcal (2) G-P(sol) polarization free energy of solvation -26.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.720 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.214 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds