Wall clock time and date at job start Sun Mar 7 2021 08:59:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35897 * 117.00135 * 2 1 4 4 C 1.38614 * 120.02715 * 180.02562 * 3 2 1 5 5 C 1.38661 * 119.88841 * 180.02562 * 4 3 2 6 6 O 1.35896 * 120.02225 * 179.97438 * 5 4 3 7 7 C 1.42901 * 117.00474 * 0.02840 * 6 5 4 8 8 C 1.50697 * 109.46988 * 179.97438 * 7 6 5 9 9 O 1.21282 * 120.00264 * 359.97438 * 8 7 6 10 10 N 1.34780 * 119.99745 * 179.97438 * 8 7 6 11 11 C 1.46499 * 119.99918 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.46957 * 180.02562 * 11 10 8 13 13 F 1.39899 * 112.84860 * 48.80816 * 12 11 10 14 14 C 1.53781 * 113.61147 * 180.02562 * 12 11 10 15 15 C 1.53778 * 87.07843 * 139.98327 * 14 12 11 16 16 H 1.09002 * 113.61951 * 89.19967 * 15 14 12 17 17 C 1.53004 * 113.61370 * 220.01789 * 15 14 12 18 18 O 1.42901 * 109.46955 * 184.99773 * 17 15 14 19 19 C 1.53781 * 113.61477 * 277.50006 * 12 11 10 20 20 C 1.38747 * 119.94674 * 0.02562 * 5 4 3 21 21 C 1.50693 * 119.97448 * 179.97438 * 20 5 4 22 22 O 1.42907 * 109.47661 * 285.00326 * 21 20 5 23 23 Si 1.86298 * 109.47618 * 165.00016 * 21 20 5 24 24 C 1.38196 * 120.05438 * 0.26998 * 20 5 4 25 25 C 1.38151 * 120.10908 * 359.45424 * 24 20 5 26 26 H 1.08995 * 109.47410 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.46684 * 299.99548 * 1 2 3 28 28 H 1.09004 * 109.47473 * 59.99697 * 1 2 3 29 29 H 1.07997 * 120.05758 * 0.04532 * 4 3 2 30 30 H 1.08993 * 109.46813 * 299.99531 * 7 6 5 31 31 H 1.09002 * 109.46766 * 59.99597 * 7 6 5 32 32 H 0.97001 * 120.00235 * 0.02562 * 10 8 7 33 33 H 1.08999 * 109.47178 * 300.00317 * 11 10 8 34 34 H 1.09002 * 109.47241 * 60.00498 * 11 10 8 35 35 H 1.09000 * 113.61440 * 254.52788 * 14 12 11 36 36 H 1.08998 * 113.61623 * 25.35533 * 14 12 11 37 37 H 1.08995 * 109.47263 * 304.99925 * 17 15 14 38 38 H 1.08997 * 109.46967 * 65.00171 * 17 15 14 39 39 H 0.96709 * 113.99973 * 179.97438 * 18 17 15 40 40 H 1.08999 * 113.61213 * 334.56386 * 19 12 11 41 41 H 1.08998 * 113.61165 * 105.46882 * 19 12 11 42 42 H 1.09000 * 109.46936 * 44.99949 * 21 20 5 43 43 H 0.96697 * 114.00527 * 179.97438 * 22 21 20 44 44 H 1.48506 * 109.99834 * 298.68714 * 23 21 20 45 45 H 1.48502 * 110.00011 * 59.99978 * 23 21 20 46 46 H 1.07999 * 119.94674 * 179.70027 * 24 20 5 47 47 H 1.08002 * 119.97627 * 180.25554 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4302 1.2840 -0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5959 0.0000 7 6 6.1316 1.3604 -0.0012 8 6 7.6124 1.6400 -0.0016 9 8 8.0135 2.7847 -0.0015 10 7 8.4912 0.6181 -0.0022 11 6 9.9307 0.8899 -0.0032 12 6 10.6995 -0.4330 -0.0044 13 9 10.2376 -1.3288 -0.9746 14 6 12.2273 -0.2575 -0.0049 15 6 12.2840 -1.4356 0.9819 16 1 12.3592 -2.4087 0.4964 17 6 13.3108 -1.2491 2.1007 18 8 13.3725 -2.4364 2.8935 19 6 10.8511 -1.0586 1.3922 20 6 3.2972 3.6821 0.0016 21 6 3.9774 5.0268 0.0028 22 8 4.5043 5.2930 1.3042 23 14 2.7438 6.3474 -0.4498 24 6 1.9173 3.6065 0.0083 25 6 1.2906 2.3753 0.0020 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5139 -0.8900 29 1 4.0197 0.3791 -0.0017 30 1 5.8700 0.7873 0.8883 31 1 5.8698 0.7889 -0.8917 32 1 8.1705 -0.2974 -0.0028 33 1 10.1918 1.4623 -0.8934 34 1 10.1931 1.4622 0.8866 35 1 12.6911 -0.4718 -0.9677 36 1 12.5583 0.6886 0.4233 37 1 14.2904 -1.0514 1.6657 38 1 13.0155 -0.4082 2.7283 39 1 14.0051 -2.3896 3.6234 40 1 10.8062 -0.3319 2.2033 41 1 10.2035 -1.9196 1.5575 42 1 4.7895 5.0237 -0.7243 43 1 4.9575 6.1440 1.3786 44 1 2.2120 6.0996 -1.8141 45 1 1.6314 6.3618 0.5339 46 1 1.3278 4.5114 0.0145 47 1 0.2121 2.3187 0.0031 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:55 Heat of formation + Delta-G solvation = -178.333035 kcal Electronic energy + Delta-G solvation = -31549.422130 eV Core-core repulsion = 26808.458427 eV Total energy + Delta-G solvation = -4740.963702 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.156 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -48.89722 -41.93773 -40.97593 -40.06009 -39.68642 -38.26725 -37.20929 -37.04573 -35.72495 -32.52227 -31.81362 -30.83697 -29.16353 -28.46929 -27.11960 -26.75650 -26.12719 -23.86029 -22.49101 -22.27112 -21.80214 -20.68578 -20.02008 -18.80719 -18.40117 -18.28766 -17.96595 -17.65943 -17.56488 -17.18595 -16.91172 -16.86225 -16.72733 -16.47183 -16.34883 -15.80696 -15.73314 -15.67576 -15.33933 -15.13478 -14.93298 -14.60868 -14.32530 -14.10616 -13.88411 -13.83730 -13.61291 -13.43937 -13.41647 -13.26458 -13.21464 -12.60134 -12.49210 -12.39577 -12.01703 -11.93971 -11.89848 -11.76670 -11.54083 -11.35218 -11.08614 -10.82136 -10.35119 -10.22252 -9.85770 -9.25004 -4.94447 0.01442 0.14663 1.29548 1.30390 1.33860 1.63821 1.92030 2.10979 2.38471 2.43413 3.02191 3.10016 3.12341 3.32802 3.41635 3.47362 3.54384 3.55934 3.81313 3.83349 3.85010 3.95312 3.97428 4.08384 4.17746 4.22408 4.25831 4.30681 4.31376 4.34576 4.43733 4.51088 4.53794 4.59323 4.62530 4.68004 4.70630 4.83418 4.86375 4.89312 4.97211 5.05910 5.11557 5.13913 5.28284 5.36523 5.98426 6.20301 6.28173 6.87927 6.91567 6.96236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.325 6.325 3 C 0.166 3.834 4 C -0.249 4.249 5 C 0.180 3.820 6 O -0.295 6.295 7 C 0.032 3.968 8 C 0.520 3.480 9 O -0.559 6.559 10 N -0.712 5.712 11 C 0.116 3.884 12 C 0.080 3.920 13 F -0.198 7.198 14 C -0.134 4.134 15 C -0.114 4.114 16 H 0.086 0.914 17 C 0.083 3.917 18 O -0.599 6.599 19 C -0.142 4.142 20 C -0.166 4.166 21 C -0.074 4.074 22 O -0.563 6.563 23 Si 0.780 3.220 24 C -0.056 4.056 25 C -0.240 4.240 26 H 0.122 0.878 27 H 0.066 0.934 28 H 0.067 0.933 29 H 0.161 0.839 30 H 0.121 0.879 31 H 0.122 0.878 32 H 0.417 0.583 33 H 0.075 0.925 34 H 0.099 0.901 35 H 0.089 0.911 36 H 0.126 0.874 37 H 0.059 0.941 38 H 0.065 0.935 39 H 0.397 0.603 40 H 0.115 0.885 41 H 0.078 0.922 42 H 0.067 0.933 43 H 0.397 0.603 44 H -0.286 1.286 45 H -0.279 1.279 46 H 0.136 0.864 47 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.219 -0.563 1.082 1.724 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.238 6.238 3 C 0.120 3.880 4 C -0.268 4.268 5 C 0.134 3.866 6 O -0.207 6.207 7 C -0.046 4.046 8 C 0.306 3.694 9 O -0.437 6.437 10 N -0.367 5.367 11 C -0.008 4.008 12 C 0.061 3.939 13 F -0.178 7.178 14 C -0.172 4.172 15 C -0.133 4.133 16 H 0.104 0.896 17 C 0.005 3.995 18 O -0.408 6.408 19 C -0.179 4.179 20 C -0.167 4.167 21 C -0.182 4.182 22 O -0.373 6.373 23 Si 0.684 3.316 24 C -0.074 4.074 25 C -0.259 4.259 26 H 0.140 0.860 27 H 0.085 0.915 28 H 0.086 0.914 29 H 0.178 0.822 30 H 0.139 0.861 31 H 0.139 0.861 32 H 0.254 0.746 33 H 0.094 0.906 34 H 0.117 0.883 35 H 0.107 0.893 36 H 0.144 0.856 37 H 0.077 0.923 38 H 0.083 0.917 39 H 0.247 0.753 40 H 0.134 0.866 41 H 0.097 0.903 42 H 0.085 0.915 43 H 0.247 0.753 44 H -0.212 1.212 45 H -0.206 1.206 46 H 0.153 0.847 47 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 0.200 -0.404 0.529 0.695 hybrid contribution 0.171 -1.162 0.156 1.185 sum 0.371 -1.566 0.685 1.749 Atomic orbital electron populations 1.23423 0.75964 1.05950 1.02525 1.86060 1.23781 1.26109 1.87861 1.18811 0.91746 0.84797 0.92661 1.20629 0.93305 0.97622 1.15224 1.18490 0.82071 0.92841 0.93203 1.86185 1.14913 1.31630 1.87987 1.22753 0.88711 0.86466 1.06672 1.20257 0.88170 0.85033 0.75948 1.90763 1.80572 1.22684 1.49650 1.45564 1.06075 1.09796 1.75247 1.21873 0.78879 0.95593 1.04474 1.22141 0.95892 0.87382 0.88440 1.92855 1.90105 1.69753 1.65104 1.23572 0.91966 1.00454 1.01195 1.22481 0.95058 0.99319 0.96392 0.89594 1.22236 0.98344 0.87039 0.91835 1.86442 1.67040 1.39535 1.47758 1.23722 0.97138 1.01932 0.95127 1.18942 0.92846 0.93416 1.11501 1.24789 1.04960 0.99777 0.88715 1.86448 1.77443 1.44227 1.29132 0.94127 0.76574 0.84815 0.76112 1.20766 0.92635 0.98235 0.95757 1.21342 1.01605 0.91254 1.11676 0.86010 0.91534 0.91444 0.82195 0.86141 0.86079 0.74560 0.90625 0.88291 0.89265 0.85573 0.92316 0.91720 0.75282 0.86630 0.90303 0.91525 0.75318 1.21242 1.20648 0.84695 0.82692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.33 -1.23 10.49 -92.39 -0.97 -2.20 16 3 C 0.17 0.97 6.68 22.49 0.15 1.12 16 4 C -0.25 -1.41 8.97 22.46 0.20 -1.20 16 5 C 0.18 1.65 6.66 22.49 0.15 1.80 16 6 O -0.30 -2.84 8.99 -73.34 -0.66 -3.50 16 7 C 0.03 0.03 5.22 71.24 0.37 0.41 16 8 C 0.52 2.41 7.91 87.66 0.69 3.11 16 9 O -0.56 -7.94 16.50 16.00 0.26 -7.67 16 10 N -0.71 1.04 5.47 -463.05 -2.53 -1.49 16 11 C 0.12 -0.23 5.36 86.38 0.46 0.23 16 12 C 0.08 -0.26 1.67 -10.27 -0.02 -0.27 16 13 F -0.20 -0.34 16.80 44.97 0.76 0.42 16 14 C -0.13 0.74 7.10 31.12 0.22 0.97 16 15 C -0.11 0.33 3.99 -10.28 -0.04 0.29 16 16 H 0.09 0.09 8.14 -2.39 -0.02 0.07 16 17 C 0.08 -0.35 6.89 71.98 0.50 0.14 16 18 O -0.60 0.17 13.66 -148.98 -2.04 -1.87 16 19 C -0.14 0.58 7.08 31.11 0.22 0.80 16 20 C -0.17 -1.64 5.30 -19.75 -0.10 -1.74 16 21 C -0.07 -0.50 2.36 71.23 0.17 -0.33 16 22 O -0.56 -4.24 12.86 -148.98 -1.92 -6.15 16 23 Si 0.78 1.02 30.21 68.60 2.07 3.09 16 24 C -0.06 -0.43 8.65 22.24 0.19 -0.23 16 25 C -0.24 -1.21 9.04 22.38 0.20 -1.00 16 26 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 27 H 0.07 -0.32 7.66 -2.39 -0.02 -0.34 16 28 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 29 H 0.16 0.03 6.30 -2.91 -0.02 0.01 16 30 H 0.12 -0.48 7.66 -2.39 -0.02 -0.50 16 31 H 0.12 -0.52 7.66 -2.39 -0.02 -0.53 16 32 H 0.42 -2.50 8.19 -92.71 -0.76 -3.26 16 33 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 34 H 0.10 -0.30 7.94 -2.39 -0.02 -0.32 16 35 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 36 H 0.13 -1.20 8.06 -2.39 -0.02 -1.22 16 37 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 38 H 0.06 -0.47 7.84 -2.39 -0.02 -0.49 16 39 H 0.40 -3.40 9.12 -74.05 -0.68 -4.08 16 40 H 0.12 -0.76 7.72 -2.39 -0.02 -0.78 16 41 H 0.08 -0.20 8.14 -2.39 -0.02 -0.21 16 42 H 0.07 0.48 7.82 -2.39 -0.02 0.46 16 43 H 0.40 -1.01 8.74 -74.06 -0.65 -1.66 16 44 H -0.29 -1.74 7.11 99.48 0.71 -1.04 16 45 H -0.28 -1.60 6.74 99.48 0.67 -0.93 16 46 H 0.14 0.76 4.89 -2.91 -0.01 0.74 16 47 H 0.16 -0.05 6.29 -2.91 -0.02 -0.06 16 Total: 0.00 -28.90 393.91 -1.58 -30.48 By element: Atomic # 1 Polarization: -15.21 SS G_CDS: -1.04 Total: -16.25 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: 4.48 Total: 5.14 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -2.53 Total: -1.49 kcal Atomic # 8 Polarization: -16.08 SS G_CDS: -5.32 Total: -21.39 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.76 Total: 0.42 kcal Atomic # 14 Polarization: 1.02 SS G_CDS: 2.07 Total: 3.09 kcal Total: -28.90 -1.58 -30.48 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.851 kcal (2) G-P(sol) polarization free energy of solvation -28.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.580 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds