Wall clock time and date at job start Sun Mar 7 2021 08:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37641 * 125.67432 * 2 1 4 4 C 1.46676 * 126.22549 * 0.05864 * 3 2 1 5 5 O 1.21692 * 120.00065 * 5.50871 * 4 3 2 6 6 N 1.34778 * 119.99761 * 185.50581 * 4 3 2 7 7 C 1.46497 * 119.99691 * 185.08528 * 6 4 3 8 8 C 1.53006 * 109.47179 * 180.02562 * 7 6 4 9 9 F 1.39903 * 112.84889 * 48.80081 * 8 7 6 10 10 C 1.53778 * 113.61525 * 179.97438 * 8 7 6 11 11 C 1.53783 * 87.07986 * 139.98172 * 10 8 7 12 12 H 1.08997 * 113.61999 * 89.20028 * 11 10 8 13 13 C 1.52998 * 113.61409 * 220.02072 * 11 10 8 14 14 O 1.42900 * 109.47319 * 184.99657 * 13 11 10 15 15 C 1.53780 * 87.08129 * 334.56583 * 11 10 8 16 16 C 1.37879 * 107.54745 * 180.16284 * 3 2 1 17 17 C 1.39880 * 107.09267 * 359.63522 * 16 3 2 18 18 Br 1.89099 * 126.07363 * 180.22728 * 17 16 3 19 19 C 1.35503 * 107.85118 * 0.22821 * 17 16 3 20 20 C 1.50700 * 125.56746 * 180.02562 * 19 17 16 21 21 O 1.42902 * 109.46767 * 209.97785 * 20 19 17 22 22 Si 1.86299 * 109.47183 * 329.97698 * 20 19 17 23 23 H 1.09000 * 109.47343 * 264.41880 * 1 2 3 24 24 H 1.08996 * 109.47392 * 24.42136 * 1 2 3 25 25 H 1.08998 * 109.47111 * 144.41936 * 1 2 3 26 26 H 0.97004 * 119.99928 * 5.08487 * 6 4 3 27 27 H 1.09000 * 109.47197 * 299.99661 * 7 6 4 28 28 H 1.08999 * 109.47736 * 60.00111 * 7 6 4 29 29 H 1.08994 * 113.61510 * 254.52522 * 10 8 7 30 30 H 1.08997 * 113.61669 * 25.34977 * 10 8 7 31 31 H 1.09001 * 109.47165 * 304.99827 * 13 11 10 32 32 H 1.08998 * 109.47625 * 64.99914 * 13 11 10 33 33 H 0.96696 * 114.00386 * 179.97438 * 14 13 11 34 34 H 1.08998 * 113.61838 * 270.88885 * 15 11 10 35 35 H 1.09001 * 113.61388 * 139.97947 * 15 11 10 36 36 H 1.08003 * 126.45256 * 179.90671 * 16 3 2 37 37 H 1.09002 * 109.47213 * 89.98087 * 20 19 17 38 38 H 0.96696 * 114.00074 * 60.00122 * 21 20 19 39 39 H 1.48500 * 109.99892 * 180.02562 * 22 20 19 40 40 H 1.48496 * 110.00265 * 301.31802 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8120 2.5123 0.0012 5 8 0.6259 2.7647 0.1035 6 7 2.7069 3.5138 -0.1109 7 6 2.2658 4.9062 0.0020 8 6 3.4689 5.8373 -0.1621 9 9 4.2502 5.5235 -1.2795 10 6 3.1115 7.3294 -0.0602 11 6 4.4142 7.5063 0.7377 12 1 5.2825 7.7195 0.1143 13 6 4.2823 8.4666 1.9214 14 8 5.5630 8.6554 2.5266 15 6 4.2832 6.0248 1.1288 16 6 3.5780 0.6891 -0.0037 17 6 3.5528 -0.7094 0.0025 18 35 5.0609 -1.8502 0.0071 19 6 2.2558 -1.1015 0.0047 20 6 1.7714 -2.5285 0.0117 21 8 0.5130 -2.6076 -0.6609 22 14 3.0117 -3.6096 -0.8620 23 1 -0.3634 -0.0999 1.0228 24 1 -0.3634 0.9357 -0.4249 25 1 -0.3633 -0.8358 -0.5979 26 1 3.6430 3.3126 -0.2664 27 1 1.5331 5.1195 -0.7763 28 1 1.8133 5.0659 0.9806 29 1 3.1140 7.8456 -1.0202 30 1 2.2111 7.5240 0.5226 31 1 3.9013 9.4257 1.5705 32 1 3.5925 8.0477 2.6541 33 1 5.5549 9.2545 3.2856 34 1 3.7040 5.8627 2.0378 35 1 5.2317 5.4877 1.1286 36 1 4.4582 1.3151 -0.0061 37 1 1.6551 -2.8676 1.0411 38 1 0.5416 -2.3206 -1.5838 39 1 2.5453 -5.0195 -0.8624 40 1 3.2029 -3.1381 -2.2571 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:58 Heat of formation + Delta-G solvation = -89.904622 kcal Electronic energy + Delta-G solvation = -26537.757404 eV Core-core repulsion = 22316.512476 eV Total energy + Delta-G solvation = -4221.244929 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.047 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.86900 -42.94851 -40.56836 -39.71603 -38.06584 -37.19462 -35.88656 -34.57842 -32.61286 -31.39082 -30.20025 -27.80719 -27.37540 -27.01775 -26.17892 -23.37432 -22.28644 -21.60492 -20.86062 -20.57132 -19.11825 -18.45335 -18.25983 -17.48379 -17.32497 -16.93839 -16.81067 -16.44644 -16.17979 -16.15365 -15.70711 -15.56398 -15.43483 -15.02816 -14.92511 -14.63155 -14.57665 -14.23311 -14.09268 -13.79466 -13.71303 -13.41174 -13.21934 -13.18548 -12.82481 -12.47215 -12.36940 -12.07623 -11.87843 -11.69373 -11.52335 -11.32904 -11.22492 -10.86888 -10.79727 -10.37388 -9.91495 -9.38473 -4.69978 0.09730 0.32303 0.86725 1.16933 1.41401 1.54002 1.90356 2.06714 2.17980 3.01485 3.04719 3.12410 3.14430 3.25363 3.35507 3.49229 3.57479 3.72806 3.84079 4.08368 4.23785 4.25860 4.32469 4.36819 4.38081 4.45427 4.53099 4.60955 4.61790 4.64883 4.66213 4.73245 4.85773 4.92795 4.99688 5.12935 5.21761 5.38939 5.53052 5.74394 6.18823 6.25202 6.90253 6.91630 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.389 5.389 3 C -0.058 4.058 4 C 0.593 3.407 5 O -0.572 6.572 6 N -0.705 5.705 7 C 0.117 3.883 8 C 0.079 3.921 9 F -0.198 7.198 10 C -0.134 4.134 11 C -0.114 4.114 12 H 0.085 0.915 13 C 0.083 3.917 14 O -0.599 6.599 15 C -0.141 4.141 16 C -0.092 4.092 17 C -0.190 4.190 18 Br 0.090 6.910 19 C 0.059 3.941 20 C -0.039 4.039 21 O -0.540 6.540 22 Si 0.629 3.371 23 H 0.082 0.918 24 H 0.094 0.906 25 H 0.115 0.885 26 H 0.416 0.584 27 H 0.077 0.923 28 H 0.103 0.897 29 H 0.088 0.912 30 H 0.127 0.873 31 H 0.057 0.943 32 H 0.065 0.935 33 H 0.397 0.603 34 H 0.117 0.883 35 H 0.079 0.921 36 H 0.183 0.817 37 H 0.142 0.858 38 H 0.387 0.613 39 H -0.268 1.268 40 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.659 3.878 3.211 5.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.061 5.061 3 C -0.172 4.172 4 C 0.382 3.618 5 O -0.454 6.454 6 N -0.356 5.356 7 C -0.006 4.006 8 C 0.060 3.940 9 F -0.179 7.179 10 C -0.172 4.172 11 C -0.133 4.133 12 H 0.103 0.897 13 C 0.006 3.994 14 O -0.407 6.407 15 C -0.178 4.178 16 C -0.119 4.119 17 C -0.276 4.276 18 Br 0.174 6.826 19 C -0.064 4.064 20 C -0.149 4.149 21 O -0.347 6.347 22 Si 0.530 3.470 23 H 0.100 0.900 24 H 0.112 0.888 25 H 0.133 0.867 26 H 0.253 0.747 27 H 0.095 0.905 28 H 0.121 0.879 29 H 0.106 0.894 30 H 0.145 0.855 31 H 0.076 0.924 32 H 0.083 0.917 33 H 0.247 0.753 34 H 0.135 0.865 35 H 0.098 0.902 36 H 0.200 0.800 37 H 0.159 0.841 38 H 0.237 0.763 39 H -0.193 1.193 40 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges 1.106 2.548 2.700 3.874 hybrid contribution -0.963 0.907 -0.665 1.481 sum 0.143 3.455 2.035 4.013 Atomic orbital electron populations 1.22692 0.74200 1.06339 1.05192 1.43930 1.07770 1.03734 1.50627 1.20112 0.90387 0.87744 1.18968 1.16904 0.85228 0.83699 0.76013 1.90807 1.17248 1.85064 1.52254 1.45400 1.12033 1.05355 1.72841 1.21910 0.95650 0.78632 1.04454 1.22157 0.90522 0.96533 0.84740 1.92860 1.76381 1.94061 1.54566 1.23571 0.99104 0.92019 1.02488 1.22483 0.98658 0.95041 0.97075 0.89652 1.22233 0.84823 0.98416 0.93966 1.86441 1.31832 1.71242 1.51223 1.23729 1.01207 0.96364 0.96536 1.21486 0.95598 0.92693 1.02116 1.20685 0.90727 0.94872 1.21301 1.96317 1.32738 1.56178 1.97361 1.21008 0.89581 0.90294 1.05541 1.24717 0.93186 0.92484 1.04554 1.86544 1.29769 1.88682 1.29739 0.92690 0.92367 0.77975 0.83943 0.89991 0.88759 0.86650 0.74710 0.90490 0.87908 0.89378 0.85513 0.92431 0.91669 0.75306 0.86511 0.90199 0.79990 0.84103 0.76309 1.19341 1.20482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.08 10.21 127.77 1.30 1.39 16 2 N -0.39 -1.23 3.16 -519.63 -1.64 -2.87 16 3 C -0.06 -0.17 6.88 40.35 0.28 0.11 16 4 C 0.59 2.38 7.77 86.45 0.67 3.05 16 5 O -0.57 -5.69 14.63 -4.32 -0.06 -5.76 16 6 N -0.70 1.02 5.44 -467.08 -2.54 -1.53 16 7 C 0.12 -0.38 5.37 86.38 0.46 0.09 16 8 C 0.08 -0.32 1.67 -10.27 -0.02 -0.34 16 9 F -0.20 -0.26 16.80 44.97 0.76 0.49 16 10 C -0.13 0.86 7.09 31.12 0.22 1.08 16 11 C -0.11 0.42 3.99 -10.27 -0.04 0.38 16 12 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 13 C 0.08 -0.42 6.88 71.98 0.50 0.08 16 14 O -0.60 0.60 13.66 -148.98 -2.03 -1.44 16 15 C -0.14 0.72 7.08 31.12 0.22 0.94 16 16 C -0.09 0.06 10.33 22.58 0.23 0.29 16 17 C -0.19 -0.12 6.16 22.03 0.14 0.01 16 18 Br 0.09 -0.18 28.25 -20.37 -0.58 -0.76 16 19 C 0.06 0.11 6.15 41.35 0.25 0.37 16 20 C -0.04 -0.03 2.99 71.24 0.21 0.19 16 21 O -0.54 -0.60 10.11 -148.98 -1.51 -2.11 16 22 Si 0.63 1.62 27.11 68.60 1.86 3.48 16 23 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 24 H 0.09 0.39 6.13 -2.39 -0.01 0.37 16 25 H 0.12 -0.15 5.26 -2.39 -0.01 -0.16 16 26 H 0.42 -1.97 7.13 -92.71 -0.66 -2.63 16 27 H 0.08 -0.10 8.14 -2.39 -0.02 -0.11 16 28 H 0.10 -0.52 7.94 -2.39 -0.02 -0.54 16 29 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 30 H 0.13 -1.34 8.06 -2.39 -0.02 -1.36 16 31 H 0.06 -0.39 8.14 -2.39 -0.02 -0.40 16 32 H 0.07 -0.54 7.84 -2.39 -0.02 -0.56 16 33 H 0.40 -3.67 9.12 -74.06 -0.68 -4.34 16 34 H 0.12 -0.92 7.72 -2.39 -0.02 -0.93 16 35 H 0.08 -0.28 8.14 -2.39 -0.02 -0.29 16 36 H 0.18 -1.19 7.49 -2.91 -0.02 -1.21 16 37 H 0.14 -0.22 7.96 -2.39 -0.02 -0.24 16 38 H 0.39 -1.30 8.31 -74.06 -0.62 -1.91 16 39 H -0.27 -2.29 7.11 99.48 0.71 -1.58 16 40 H -0.28 -2.15 7.11 99.48 0.71 -1.44 16 Total: 0.00 -18.49 347.75 -2.12 -20.61 By element: Atomic # 1 Polarization: -16.96 SS G_CDS: -0.80 Total: -17.76 kcal Atomic # 6 Polarization: 3.20 SS G_CDS: 4.43 Total: 7.63 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -4.18 Total: -4.40 kcal Atomic # 8 Polarization: -5.69 SS G_CDS: -3.60 Total: -9.30 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.76 Total: 0.49 kcal Atomic # 14 Polarization: 1.62 SS G_CDS: 1.86 Total: 3.48 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -0.58 Total: -0.76 kcal Total: -18.49 -2.12 -20.61 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.299 kcal (2) G-P(sol) polarization free energy of solvation -18.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.606 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.905 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds