Wall clock time and date at job start Sun Mar 7 2021 09:00:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35988 * 117.00118 * 2 1 4 4 C 1.39157 * 120.07235 * 180.02562 * 3 2 1 5 5 O 1.35993 * 120.07258 * 0.02562 * 4 3 2 6 6 C 1.42901 * 117.00051 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47119 * 180.02562 * 6 5 4 8 8 O 1.21281 * 120.00364 * 359.97438 * 7 6 5 9 9 N 1.34783 * 120.00012 * 180.02562 * 7 6 5 10 10 C 1.46500 * 120.00119 * 179.97438 * 9 7 6 11 11 C 1.52995 * 109.47108 * 179.97438 * 10 9 7 12 12 F 1.39905 * 112.85050 * 314.66470 * 11 10 9 13 13 C 1.53781 * 113.69312 * 85.93318 * 11 10 9 14 14 C 1.53779 * 87.08092 * 139.99220 * 13 11 10 15 15 H 1.08995 * 113.61370 * 89.11749 * 14 13 11 16 16 C 1.53007 * 113.61310 * 220.02292 * 14 13 11 17 17 O 1.42904 * 109.46734 * 272.49735 * 16 14 13 18 18 C 1.53777 * 87.08235 * 334.56833 * 14 13 11 19 19 C 1.38567 * 119.85562 * 180.29812 * 4 3 2 20 20 C 1.38246 * 119.99431 * 359.46561 * 19 4 3 21 21 C 1.38254 * 120.14949 * 0.50662 * 20 19 4 22 22 C 1.50693 * 119.92888 * 179.74562 * 21 20 19 23 23 O 1.42901 * 109.47286 * 245.02878 * 22 21 20 24 24 Si 1.86302 * 109.47231 * 5.02561 * 22 21 20 25 25 C 1.38245 * 120.14318 * 359.77294 * 21 20 19 26 26 H 1.08997 * 109.47064 * 300.00633 * 1 2 3 27 27 H 1.09006 * 109.46984 * 60.00419 * 1 2 3 28 28 H 1.09000 * 109.47530 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47199 * 60.00375 * 6 5 4 30 30 H 1.09005 * 109.47027 * 300.00185 * 6 5 4 31 31 H 0.96997 * 119.99419 * 359.97438 * 9 7 6 32 32 H 1.09005 * 109.46936 * 59.99437 * 10 9 7 33 33 H 1.09004 * 109.46937 * 300.00111 * 10 9 7 34 34 H 1.08997 * 113.61414 * 254.54602 * 13 11 10 35 35 H 1.09005 * 113.60855 * 25.44101 * 13 11 10 36 36 H 1.08995 * 109.47003 * 32.49400 * 16 14 13 37 37 H 1.08995 * 109.47164 * 152.50012 * 16 14 13 38 38 H 0.96702 * 113.99816 * 180.02562 * 17 16 14 39 39 H 1.09009 * 113.61922 * 270.88620 * 18 14 13 40 40 H 1.09003 * 113.61452 * 139.98026 * 18 14 13 41 41 H 1.07995 * 120.00214 * 179.70079 * 19 4 3 42 42 H 1.08003 * 119.92722 * 180.25676 * 20 19 4 43 43 H 1.09001 * 109.47173 * 125.02151 * 22 21 20 44 44 H 0.96699 * 114.00210 * 59.99702 * 23 22 21 45 45 H 1.48500 * 109.99796 * 58.67809 * 24 22 21 46 46 H 1.48497 * 110.00425 * 180.02562 * 24 22 21 47 47 H 1.07998 * 119.99570 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1475 -0.0016 6 6 5.6003 0.3005 -0.0015 7 6 6.2518 -1.0584 -0.0034 8 8 5.5669 -2.0593 -0.0042 9 7 7.5957 -1.1615 -0.0032 10 6 8.2290 -2.4825 -0.0044 11 6 9.7502 -2.3187 -0.0045 12 9 10.1933 -1.3587 -0.9206 13 6 10.3541 -2.1545 1.4002 14 6 11.5033 -3.0598 0.9263 15 1 12.3277 -2.5144 0.4670 16 6 11.9687 -4.0636 1.9832 17 8 12.9678 -3.4591 2.8068 18 6 10.5132 -3.6511 -0.0910 19 6 4.0604 2.5232 0.0057 20 6 3.3031 3.6797 0.0013 21 6 1.9225 3.6057 0.0012 22 6 1.1018 4.8695 0.0022 23 8 0.3653 4.9583 1.2236 24 14 2.2310 6.3434 -0.1505 25 6 1.2933 2.3747 0.0008 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 5.9066 0.8493 0.8889 30 1 5.9065 0.8511 -0.8911 31 1 8.1434 -0.3609 -0.0021 32 1 7.9229 -3.0313 -0.8951 33 1 7.9225 -3.0332 0.8849 34 1 10.6659 -1.1346 1.6250 35 1 9.7475 -2.5967 2.1906 36 1 11.1207 -4.3611 2.5999 37 1 12.3861 -4.9420 1.4911 38 1 13.3097 -4.0396 3.5005 39 1 9.9501 -4.5024 0.2916 40 1 10.9536 -3.8392 -1.0702 41 1 5.1387 2.5838 0.0102 42 1 3.7909 4.6433 0.0020 43 1 0.4093 4.8537 -0.8394 44 1 0.9189 4.9770 2.0162 45 1 3.0258 6.2469 -1.4012 46 1 1.4339 7.5963 -0.1501 47 1 0.2147 2.3197 0.0012 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:03 Heat of formation + Delta-G solvation = -173.872366 kcal Electronic energy + Delta-G solvation = -31185.420511 eV Core-core repulsion = 26444.650238 eV Total energy + Delta-G solvation = -4740.770273 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.156 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -48.93125 -41.78202 -40.82497 -39.97477 -39.19348 -38.84367 -37.30356 -36.92148 -35.64493 -32.14434 -31.52161 -30.92744 -29.24461 -28.42859 -27.27221 -26.92048 -26.11822 -23.59048 -22.58746 -22.31391 -21.71774 -20.80407 -19.77107 -18.75973 -18.42007 -18.38756 -17.97196 -17.60050 -17.40240 -17.12414 -16.94184 -16.60125 -16.53021 -16.38395 -16.10389 -15.88671 -15.67937 -15.59162 -15.56463 -15.18321 -14.99375 -14.60738 -14.30816 -14.23860 -13.90844 -13.73247 -13.66016 -13.61370 -13.43234 -13.30678 -12.63258 -12.52067 -12.50896 -12.18348 -12.10621 -12.03380 -11.97876 -11.76015 -11.63586 -11.47579 -11.00895 -10.89925 -10.46518 -10.29226 -9.78967 -8.85234 -5.06128 0.17591 0.29852 1.26729 1.38005 1.47498 1.61687 1.95320 2.31903 2.46159 2.57196 2.85984 2.95735 3.00791 3.18241 3.35485 3.42044 3.48827 3.62636 3.64462 3.77046 3.79828 3.89747 3.94011 4.10028 4.12207 4.17759 4.25797 4.29046 4.29811 4.33987 4.37525 4.39464 4.47389 4.49018 4.50995 4.57078 4.65063 4.67702 4.76006 4.80527 4.99756 5.09941 5.12144 5.24061 5.37083 5.55322 5.95333 6.25150 6.54055 6.55065 6.56388 7.04898 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.518 3.482 8 O -0.508 6.508 9 N -0.726 5.726 10 C 0.116 3.884 11 C 0.080 3.920 12 F -0.184 7.184 13 C -0.146 4.146 14 C -0.109 4.109 15 H 0.105 0.895 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.142 4.142 19 C -0.169 4.169 20 C -0.112 4.112 21 C -0.115 4.115 22 C -0.066 4.066 23 O -0.540 6.540 24 Si 0.688 3.312 25 C -0.146 4.146 26 H 0.057 0.943 27 H 0.055 0.945 28 H 0.103 0.897 29 H 0.096 0.904 30 H 0.095 0.905 31 H 0.406 0.594 32 H 0.083 0.917 33 H 0.092 0.908 34 H 0.085 0.915 35 H 0.103 0.897 36 H 0.050 0.950 37 H 0.051 0.949 38 H 0.382 0.618 39 H 0.106 0.894 40 H 0.090 0.910 41 H 0.140 0.860 42 H 0.133 0.867 43 H 0.113 0.887 44 H 0.379 0.621 45 H -0.257 1.257 46 H -0.255 1.255 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.124 0.447 3.084 5.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.302 3.698 8 O -0.382 6.382 9 N -0.382 5.382 10 C -0.008 4.008 11 C 0.061 3.939 12 F -0.164 7.164 13 C -0.183 4.183 14 C -0.127 4.127 15 H 0.123 0.877 16 C 0.007 3.993 17 O -0.379 6.379 18 C -0.180 4.180 19 C -0.188 4.188 20 C -0.130 4.130 21 C -0.116 4.116 22 C -0.177 4.177 23 O -0.346 6.346 24 Si 0.590 3.410 25 C -0.165 4.165 26 H 0.076 0.924 27 H 0.074 0.926 28 H 0.121 0.879 29 H 0.114 0.886 30 H 0.113 0.887 31 H 0.241 0.759 32 H 0.102 0.898 33 H 0.110 0.890 34 H 0.104 0.896 35 H 0.121 0.879 36 H 0.068 0.932 37 H 0.069 0.931 38 H 0.230 0.770 39 H 0.125 0.875 40 H 0.109 0.891 41 H 0.158 0.842 42 H 0.150 0.850 43 H 0.130 0.870 44 H 0.227 0.773 45 H -0.182 1.182 46 H -0.180 1.180 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.221 0.532 1.763 3.710 hybrid contribution 0.035 -0.207 -0.108 0.236 sum 3.256 0.325 1.654 3.667 Atomic orbital electron populations 1.23132 0.78122 1.04403 1.01366 1.86246 1.21329 1.25345 1.88548 1.18278 0.89009 0.85562 1.01039 1.18275 0.88291 0.85754 1.01847 1.86271 1.16001 1.27775 1.88883 1.22451 0.81281 0.96069 1.04150 1.20011 0.82143 0.90714 0.76906 1.90804 1.62564 1.38013 1.46797 1.45626 1.06128 1.09586 1.76824 1.21826 0.89179 0.85333 1.04492 1.22079 0.92698 0.89287 0.89800 1.92880 1.90522 1.64975 1.68020 1.23728 0.97177 1.02458 0.94975 1.22512 0.97133 0.97217 0.95842 0.87657 1.22142 0.90750 0.94639 0.91729 1.86487 1.58195 1.44478 1.48757 1.23564 0.97078 0.96094 1.01314 1.21003 1.00507 0.90681 1.06609 1.20668 0.92737 0.97764 1.01819 1.20037 0.93710 0.95212 1.02645 1.25032 1.00794 1.01656 0.90185 1.86503 1.36374 1.96657 1.15036 0.94744 0.81774 0.76670 0.87784 1.20936 1.00371 0.90423 1.04762 0.92416 0.92632 0.87867 0.88594 0.88673 0.75896 0.89844 0.89016 0.89588 0.87897 0.93180 0.93122 0.77030 0.87542 0.89113 0.84238 0.85019 0.86980 0.77322 1.18176 1.17980 0.84221 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.34 10.28 -34.21 -0.35 -1.69 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 4 C 0.10 0.29 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.10 9.45 -47.35 -0.45 -1.55 16 6 C 0.04 -0.02 5.22 36.00 0.19 0.17 16 7 C 0.52 0.94 7.91 -10.98 -0.09 0.85 16 8 O -0.51 -3.45 16.50 -14.35 -0.24 -3.68 16 9 N -0.73 0.80 5.45 -60.29 -0.33 0.47 16 10 C 0.12 -0.14 5.41 -4.04 -0.02 -0.16 16 11 C 0.08 -0.15 1.72 -89.81 -0.15 -0.30 16 12 F -0.18 -0.05 16.64 2.25 0.04 -0.01 16 13 C -0.15 0.33 7.08 -25.92 -0.18 0.15 16 14 C -0.11 0.18 3.99 -89.81 -0.36 -0.17 16 15 H 0.11 -0.03 8.14 -51.93 -0.42 -0.45 16 16 C 0.09 -0.18 6.88 37.16 0.26 0.08 16 17 O -0.57 0.19 13.66 -35.23 -0.48 -0.29 16 18 C -0.14 0.39 7.10 -25.92 -0.18 0.21 16 19 C -0.17 0.04 9.04 -39.46 -0.36 -0.32 16 20 C -0.11 0.07 8.66 -39.57 -0.34 -0.27 16 21 C -0.12 -0.05 5.35 -104.62 -0.56 -0.61 16 22 C -0.07 0.02 2.80 36.00 0.10 0.12 16 23 O -0.54 -0.08 12.83 -35.23 -0.45 -0.53 16 24 Si 0.69 -0.89 29.80 -169.99 -5.06 -5.96 16 25 C -0.15 -0.24 8.67 -39.46 -0.34 -0.58 16 26 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 27 H 0.06 -0.04 7.67 -51.93 -0.40 -0.43 16 28 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.10 -0.33 7.65 -51.93 -0.40 -0.73 16 30 H 0.10 -0.28 7.67 -51.93 -0.40 -0.68 16 31 H 0.41 -1.38 8.08 -40.82 -0.33 -1.71 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 -0.14 7.88 -51.93 -0.41 -0.55 16 34 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.10 -0.32 7.68 -51.93 -0.40 -0.72 16 36 H 0.05 -0.16 7.84 -51.93 -0.41 -0.57 16 37 H 0.05 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 39 H 0.11 -0.45 8.06 -51.92 -0.42 -0.87 16 40 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 41 H 0.14 -0.47 6.30 -52.49 -0.33 -0.80 16 42 H 0.13 -0.40 4.89 -52.48 -0.26 -0.65 16 43 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 44 H 0.38 -1.40 8.70 45.56 0.40 -1.00 16 45 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 46 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 47 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 394.18 15.07 5.94 5.94 Total: 0.00 -12.47 394.18 -8.77 -21.24 By element: Atomic # 1 Polarization: -8.43 SS G_CDS: -5.81 Total: -14.23 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -1.58 Total: 0.28 kcal Atomic # 7 Polarization: 0.80 SS G_CDS: -0.33 Total: 0.47 kcal Atomic # 8 Polarization: -5.77 SS G_CDS: -1.97 Total: -7.74 kcal Atomic # 9 Polarization: -0.05 SS G_CDS: 0.04 Total: -0.01 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.06 Total: -5.96 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -12.47 -8.77 -21.24 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.629 kcal (2) G-P(sol) polarization free energy of solvation -12.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.872 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds