Wall clock time and date at job start Sun Mar 7 2021 09:00:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35988 * 117.00118 * 2 1 4 4 C 1.39157 * 120.07235 * 180.02562 * 3 2 1 5 5 O 1.35993 * 120.07258 * 0.02562 * 4 3 2 6 6 C 1.42901 * 117.00051 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47119 * 180.02562 * 6 5 4 8 8 O 1.21281 * 120.00364 * 359.97438 * 7 6 5 9 9 N 1.34783 * 120.00012 * 180.02562 * 7 6 5 10 10 C 1.46500 * 120.00119 * 179.97438 * 9 7 6 11 11 C 1.52995 * 109.47108 * 179.97438 * 10 9 7 12 12 F 1.39905 * 112.85050 * 314.66470 * 11 10 9 13 13 C 1.53781 * 113.69312 * 85.93318 * 11 10 9 14 14 C 1.53779 * 87.08092 * 139.99220 * 13 11 10 15 15 H 1.08995 * 113.61370 * 89.11749 * 14 13 11 16 16 C 1.53007 * 113.61310 * 220.02292 * 14 13 11 17 17 O 1.42904 * 109.46734 * 272.49735 * 16 14 13 18 18 C 1.53777 * 87.08235 * 334.56833 * 14 13 11 19 19 C 1.38567 * 119.85562 * 180.29812 * 4 3 2 20 20 C 1.38246 * 119.99431 * 359.46561 * 19 4 3 21 21 C 1.38254 * 120.14949 * 0.50662 * 20 19 4 22 22 C 1.50693 * 119.92888 * 179.74562 * 21 20 19 23 23 O 1.42901 * 109.47286 * 245.02878 * 22 21 20 24 24 Si 1.86302 * 109.47231 * 5.02561 * 22 21 20 25 25 C 1.38245 * 120.14318 * 359.77294 * 21 20 19 26 26 H 1.08997 * 109.47064 * 300.00633 * 1 2 3 27 27 H 1.09006 * 109.46984 * 60.00419 * 1 2 3 28 28 H 1.09000 * 109.47530 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47199 * 60.00375 * 6 5 4 30 30 H 1.09005 * 109.47027 * 300.00185 * 6 5 4 31 31 H 0.96997 * 119.99419 * 359.97438 * 9 7 6 32 32 H 1.09005 * 109.46936 * 59.99437 * 10 9 7 33 33 H 1.09004 * 109.46937 * 300.00111 * 10 9 7 34 34 H 1.08997 * 113.61414 * 254.54602 * 13 11 10 35 35 H 1.09005 * 113.60855 * 25.44101 * 13 11 10 36 36 H 1.08995 * 109.47003 * 32.49400 * 16 14 13 37 37 H 1.08995 * 109.47164 * 152.50012 * 16 14 13 38 38 H 0.96702 * 113.99816 * 180.02562 * 17 16 14 39 39 H 1.09009 * 113.61922 * 270.88620 * 18 14 13 40 40 H 1.09003 * 113.61452 * 139.98026 * 18 14 13 41 41 H 1.07995 * 120.00214 * 179.70079 * 19 4 3 42 42 H 1.08003 * 119.92722 * 180.25676 * 20 19 4 43 43 H 1.09001 * 109.47173 * 125.02151 * 22 21 20 44 44 H 0.96699 * 114.00210 * 59.99702 * 23 22 21 45 45 H 1.48500 * 109.99796 * 58.67809 * 24 22 21 46 46 H 1.48497 * 110.00425 * 180.02562 * 24 22 21 47 47 H 1.07998 * 119.99570 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1475 -0.0016 6 6 5.6003 0.3005 -0.0015 7 6 6.2518 -1.0584 -0.0034 8 8 5.5669 -2.0593 -0.0042 9 7 7.5957 -1.1615 -0.0032 10 6 8.2290 -2.4825 -0.0044 11 6 9.7502 -2.3187 -0.0045 12 9 10.1933 -1.3587 -0.9206 13 6 10.3541 -2.1545 1.4002 14 6 11.5033 -3.0598 0.9263 15 1 12.3277 -2.5144 0.4670 16 6 11.9687 -4.0636 1.9832 17 8 12.9678 -3.4591 2.8068 18 6 10.5132 -3.6511 -0.0910 19 6 4.0604 2.5232 0.0057 20 6 3.3031 3.6797 0.0013 21 6 1.9225 3.6057 0.0012 22 6 1.1018 4.8695 0.0022 23 8 0.3653 4.9583 1.2236 24 14 2.2310 6.3434 -0.1505 25 6 1.2933 2.3747 0.0008 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 5.9066 0.8493 0.8889 30 1 5.9065 0.8511 -0.8911 31 1 8.1434 -0.3609 -0.0021 32 1 7.9229 -3.0313 -0.8951 33 1 7.9225 -3.0332 0.8849 34 1 10.6659 -1.1346 1.6250 35 1 9.7475 -2.5967 2.1906 36 1 11.1207 -4.3611 2.5999 37 1 12.3861 -4.9420 1.4911 38 1 13.3097 -4.0396 3.5005 39 1 9.9501 -4.5024 0.2916 40 1 10.9536 -3.8392 -1.0702 41 1 5.1387 2.5838 0.0102 42 1 3.7909 4.6433 0.0020 43 1 0.4093 4.8537 -0.8394 44 1 0.9189 4.9770 2.0162 45 1 3.0258 6.2469 -1.4012 46 1 1.4339 7.5963 -0.1501 47 1 0.2147 2.3197 0.0012 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:01 Heat of formation + Delta-G solvation = -179.893638 kcal Electronic energy + Delta-G solvation = -31185.681613 eV Core-core repulsion = 26444.650238 eV Total energy + Delta-G solvation = -4741.031375 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.156 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -48.88156 -41.82837 -40.90442 -39.85908 -39.28869 -38.86839 -37.19548 -36.91968 -35.70600 -32.15260 -31.52367 -30.90958 -29.16617 -28.45694 -27.10147 -26.80084 -26.09327 -23.59840 -22.60210 -22.22350 -21.74971 -20.66444 -19.80398 -18.76828 -18.43262 -18.26102 -17.99288 -17.60940 -17.37252 -17.14626 -16.91209 -16.62678 -16.44605 -16.32040 -16.09632 -15.85833 -15.68318 -15.60500 -15.56869 -15.10744 -14.90678 -14.61632 -14.30520 -14.27620 -13.82985 -13.76707 -13.60646 -13.48175 -13.37747 -13.19112 -12.64288 -12.54902 -12.37525 -12.18709 -12.12782 -11.98345 -11.88966 -11.76565 -11.52153 -11.33766 -11.04555 -10.80830 -10.43477 -10.32142 -9.80319 -8.92599 -4.97189 0.15562 0.27012 1.33398 1.38798 1.41157 1.67707 2.00022 2.29890 2.49643 2.55222 3.03855 3.11452 3.13971 3.34477 3.47617 3.49691 3.57813 3.69555 3.82739 3.85616 3.89705 4.03583 4.07542 4.13454 4.24786 4.27389 4.29648 4.35342 4.35655 4.44799 4.49467 4.54998 4.60681 4.63201 4.64085 4.65229 4.71769 4.84729 4.91608 4.98265 4.99539 5.11552 5.17128 5.36334 5.38312 5.58144 5.94138 6.29755 6.50974 6.78071 6.88903 7.02690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.334 6.334 3 C 0.077 3.923 4 C 0.084 3.916 5 O -0.313 6.313 6 C 0.035 3.965 7 C 0.515 3.485 8 O -0.569 6.569 9 N -0.711 5.711 10 C 0.114 3.886 11 C 0.082 3.918 12 F -0.196 7.196 13 C -0.140 4.140 14 C -0.114 4.114 15 H 0.087 0.913 16 C 0.083 3.917 17 O -0.598 6.598 18 C -0.136 4.136 19 C -0.160 4.160 20 C -0.108 4.108 21 C -0.119 4.119 22 C -0.076 4.076 23 O -0.557 6.557 24 Si 0.786 3.214 25 C -0.153 4.153 26 H 0.065 0.935 27 H 0.062 0.938 28 H 0.111 0.889 29 H 0.131 0.869 30 H 0.124 0.876 31 H 0.419 0.581 32 H 0.072 0.928 33 H 0.097 0.903 34 H 0.081 0.919 35 H 0.115 0.885 36 H 0.064 0.936 37 H 0.057 0.943 38 H 0.397 0.603 39 H 0.124 0.876 40 H 0.088 0.912 41 H 0.175 0.825 42 H 0.161 0.839 43 H 0.103 0.897 44 H 0.396 0.604 45 H -0.281 1.281 46 H -0.303 1.303 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.376 1.574 3.687 6.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.248 6.248 3 C 0.032 3.968 4 C 0.039 3.961 5 O -0.227 6.227 6 C -0.043 4.043 7 C 0.302 3.698 8 O -0.447 6.447 9 N -0.366 5.366 10 C -0.010 4.010 11 C 0.063 3.937 12 F -0.177 7.177 13 C -0.178 4.178 14 C -0.133 4.133 15 H 0.105 0.895 16 C 0.005 3.995 17 O -0.407 6.407 18 C -0.174 4.174 19 C -0.178 4.178 20 C -0.126 4.126 21 C -0.120 4.120 22 C -0.185 4.185 23 O -0.365 6.365 24 Si 0.692 3.308 25 C -0.171 4.171 26 H 0.083 0.917 27 H 0.080 0.920 28 H 0.130 0.870 29 H 0.149 0.851 30 H 0.142 0.858 31 H 0.257 0.743 32 H 0.091 0.909 33 H 0.115 0.885 34 H 0.100 0.900 35 H 0.133 0.867 36 H 0.082 0.918 37 H 0.076 0.924 38 H 0.247 0.753 39 H 0.142 0.858 40 H 0.107 0.893 41 H 0.193 0.807 42 H 0.178 0.822 43 H 0.121 0.879 44 H 0.246 0.754 45 H -0.208 1.208 46 H -0.231 1.231 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.520 1.657 2.394 5.377 hybrid contribution -0.349 -0.524 -0.299 0.697 sum 4.171 1.132 2.094 4.803 Atomic orbital electron populations 1.23284 0.76824 1.05227 1.02059 1.86187 1.22976 1.26591 1.89086 1.18655 0.89879 0.85616 1.02667 1.18587 0.88188 0.86522 1.02812 1.86214 1.18064 1.29061 1.89326 1.22747 0.79432 0.95026 1.07088 1.20514 0.82576 0.91022 0.75722 1.90777 1.63931 1.40032 1.49920 1.45554 1.05487 1.10318 1.75247 1.21856 0.89535 0.85309 1.04257 1.22118 0.92116 0.89555 0.89879 1.92853 1.90637 1.65590 1.68597 1.23729 0.96926 1.02245 0.94851 1.22488 0.96872 0.97565 0.96328 0.89498 1.22232 0.91007 0.94509 0.91712 1.86439 1.58792 1.45856 1.49616 1.23589 0.96635 0.96155 1.01063 1.21392 1.02276 0.89375 1.04771 1.21004 0.92252 0.98948 1.00377 1.20202 0.94506 0.94838 1.02439 1.25250 1.00997 1.02247 0.89985 1.86467 1.37508 1.96648 1.15886 0.93670 0.79190 0.72554 0.85428 1.21015 1.00490 0.90593 1.05035 0.91660 0.91959 0.87024 0.85117 0.85815 0.74324 0.90927 0.88516 0.90014 0.86679 0.91751 0.92444 0.75293 0.85783 0.89347 0.80727 0.82235 0.87907 0.75433 1.20798 1.23104 0.84177 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.17 16 2 O -0.33 -3.75 10.28 -79.55 -0.82 -4.57 16 3 C 0.08 0.64 6.70 22.57 0.15 0.79 16 4 C 0.08 0.49 6.70 22.57 0.15 0.64 16 5 O -0.31 -2.73 9.45 -67.06 -0.63 -3.36 16 6 C 0.03 -0.06 5.22 71.23 0.37 0.31 16 7 C 0.52 2.03 7.91 87.65 0.69 2.73 16 8 O -0.57 -8.76 16.50 16.00 0.26 -8.49 16 9 N -0.71 1.80 5.45 -463.05 -2.53 -0.72 16 10 C 0.11 -0.26 5.41 86.38 0.47 0.21 16 11 C 0.08 -0.32 1.72 -10.27 -0.02 -0.34 16 12 F -0.20 -0.09 16.64 44.97 0.75 0.65 16 13 C -0.14 0.70 7.08 31.12 0.22 0.92 16 14 C -0.11 0.40 3.99 -10.27 -0.04 0.36 16 15 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 16 C 0.08 -0.39 6.88 71.98 0.50 0.11 16 17 O -0.60 0.53 13.66 -148.98 -2.04 -1.51 16 18 C -0.14 0.79 7.10 31.12 0.22 1.01 16 19 C -0.16 0.36 9.04 22.35 0.20 0.56 16 20 C -0.11 0.34 8.66 22.28 0.19 0.53 16 21 C -0.12 -0.05 5.35 -19.86 -0.11 -0.15 16 22 C -0.08 0.07 2.80 71.23 0.20 0.27 16 23 O -0.56 0.02 12.83 -148.98 -1.91 -1.89 16 24 Si 0.79 -2.97 29.80 68.60 2.04 -0.92 16 25 C -0.15 -0.64 8.67 22.35 0.19 -0.44 16 26 H 0.06 0.02 7.66 -2.39 -0.02 0.00 16 27 H 0.06 0.03 7.67 -2.38 -0.02 0.01 16 28 H 0.11 -0.01 8.14 -2.39 -0.02 -0.03 16 29 H 0.13 -1.21 7.65 -2.39 -0.02 -1.23 16 30 H 0.12 -0.99 7.67 -2.38 -0.02 -1.00 16 31 H 0.42 -3.33 8.08 -92.71 -0.75 -4.08 16 32 H 0.07 0.02 8.14 -2.38 -0.02 0.00 16 33 H 0.10 -0.29 7.88 -2.39 -0.02 -0.30 16 34 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 35 H 0.11 -0.85 7.68 -2.38 -0.02 -0.87 16 36 H 0.06 -0.49 7.84 -2.39 -0.02 -0.51 16 37 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 38 H 0.40 -3.61 9.12 -74.06 -0.68 -4.28 16 39 H 0.12 -1.16 8.06 -2.38 -0.02 -1.18 16 40 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 41 H 0.18 -1.80 6.30 -2.91 -0.02 -1.82 16 42 H 0.16 -1.47 4.89 -2.91 -0.01 -1.48 16 43 H 0.10 0.07 7.96 -2.39 -0.02 0.05 16 44 H 0.40 -3.25 8.70 -74.06 -0.64 -3.90 16 45 H -0.28 -0.12 7.11 99.48 0.71 0.59 16 46 H -0.30 -1.30 7.11 99.48 0.71 -0.59 16 47 H 0.14 0.39 6.30 -2.91 -0.02 0.37 16 Total: 0.00 -32.22 394.18 -1.35 -33.57 By element: Atomic # 1 Polarization: -20.44 SS G_CDS: -0.99 Total: -21.43 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: 4.51 Total: 8.67 kcal Atomic # 7 Polarization: 1.80 SS G_CDS: -2.53 Total: -0.72 kcal Atomic # 8 Polarization: -14.69 SS G_CDS: -5.13 Total: -19.82 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.75 Total: 0.65 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: 2.04 Total: -0.92 kcal Total: -32.22 -1.35 -33.57 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.324 kcal (2) G-P(sol) polarization free energy of solvation -32.220 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.350 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds