Wall clock time and date at job start Sun Mar 7 2021 09:00:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47238 * 2 1 4 4 C 1.50697 * 109.46917 * 120.00167 * 2 1 3 5 5 C 1.38239 * 119.93731 * 245.01812 * 4 2 1 6 6 C 1.38190 * 120.06847 * 179.74647 * 5 4 2 7 7 C 1.38684 * 119.95717 * 0.52974 * 6 5 4 8 8 O 1.35911 * 120.06011 * 179.72203 * 7 6 5 9 9 C 1.42898 * 117.00108 * 359.72833 * 8 7 6 10 10 C 1.50706 * 109.47059 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99854 * 0.02562 * 10 9 8 12 12 N 1.34767 * 120.00164 * 179.97438 * 10 9 8 13 13 C 1.46500 * 120.00310 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47092 * 180.02562 * 13 12 10 15 15 F 1.39895 * 112.91111 * 48.74636 * 14 13 12 16 16 C 1.53781 * 113.61201 * 179.97438 * 14 13 12 17 17 C 1.53776 * 87.08215 * 139.97787 * 16 14 13 18 18 H 1.09004 * 113.61390 * 89.20040 * 17 16 14 19 19 C 1.52999 * 113.61491 * 220.02020 * 17 16 14 20 20 O 1.42903 * 109.47256 * 185.00283 * 19 17 16 21 21 C 1.53780 * 87.08254 * 334.56758 * 17 16 14 22 22 C 1.38832 * 119.87734 * 359.45216 * 7 6 5 23 23 Br 1.89103 * 120.03606 * 180.29504 * 22 7 6 24 24 C 1.38197 * 119.93088 * 0.27013 * 22 7 6 25 25 H 0.96701 * 114.00033 * 59.99681 * 1 2 3 26 26 H 1.09001 * 109.46665 * 239.99943 * 2 1 3 27 27 H 1.48504 * 110.00025 * 59.99946 * 3 2 1 28 28 H 1.48497 * 110.00049 * 181.32184 * 3 2 1 29 29 H 1.07994 * 119.96598 * 0.02562 * 5 4 2 30 30 H 1.07997 * 120.02528 * 180.25664 * 6 5 4 31 31 H 1.08994 * 109.46954 * 60.00188 * 9 8 7 32 32 H 1.09000 * 109.46873 * 299.99564 * 9 8 7 33 33 H 0.97001 * 120.00155 * 0.02562 * 12 10 9 34 34 H 1.08998 * 109.47238 * 59.99909 * 13 12 10 35 35 H 1.09008 * 109.46880 * 300.00108 * 13 12 10 36 36 H 1.08998 * 113.61701 * 25.42834 * 16 14 13 37 37 H 1.09000 * 113.69243 * 254.54099 * 16 14 13 38 38 H 1.08997 * 109.47286 * 64.99843 * 19 17 16 39 39 H 1.09008 * 109.47201 * 304.99623 * 19 17 16 40 40 H 0.96700 * 114.00311 * 180.02562 * 20 19 17 41 41 H 1.08997 * 113.61633 * 139.97829 * 21 17 16 42 42 H 1.09002 * 113.61577 * 270.88412 * 21 17 16 43 43 H 1.07997 * 119.98016 * 179.97438 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6383 -0.0110 2.1906 6 6 3.0956 -0.6586 3.3225 7 6 2.8545 -2.0140 3.4899 8 8 3.3082 -2.6543 4.5996 9 6 4.0317 -1.8705 5.5505 10 6 4.4513 -2.7432 6.7054 11 8 4.1599 -3.9205 6.7130 12 7 5.1512 -2.2156 7.7291 13 6 5.5596 -3.0640 8.8514 14 6 6.3341 -2.2248 9.8697 15 9 5.6829 -1.0316 10.1999 16 6 6.8098 -3.0256 11.0933 17 6 8.1203 -2.2254 11.0092 18 1 8.1019 -1.2963 11.5789 19 6 9.3697 -3.0651 11.2822 20 8 10.5198 -2.2170 11.2967 21 6 7.8183 -2.0388 9.5129 22 6 2.1440 -2.7145 2.5245 23 35 1.8054 -4.5610 2.7522 24 6 1.6839 -2.0608 1.3972 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5139 -0.8900 27 1 1.5615 2.4679 1.2085 28 1 3.5346 1.7702 -0.0322 29 1 2.8294 1.0436 2.0583 30 1 3.6442 -0.1106 4.0742 31 1 3.3952 -1.0651 5.9168 32 1 4.9161 -1.4471 5.0746 33 1 5.3846 -1.2742 7.7229 34 1 6.1957 -3.8698 8.4852 35 1 4.6750 -3.4873 9.3276 36 1 6.9350 -4.0903 10.8967 37 1 6.2342 -2.8271 11.9974 38 1 9.4814 -3.8154 10.4994 39 1 9.2710 -3.5599 12.2484 40 1 11.3503 -2.6832 11.4644 41 1 8.0562 -1.0424 9.1404 42 1 8.2192 -2.8337 8.8841 43 1 1.1314 -2.6050 0.6455 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:06 Heat of formation + Delta-G solvation = -133.641017 kcal Electronic energy + Delta-G solvation = -28847.799873 eV Core-core repulsion = 24243.175970 eV Total energy + Delta-G solvation = -4604.623903 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.051 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.95569 -41.72097 -40.72517 -39.95714 -39.05042 -37.38342 -37.26982 -35.70244 -33.65258 -32.14709 -31.26425 -30.34085 -29.33918 -27.32926 -27.03780 -26.22857 -24.07181 -22.49055 -22.26416 -21.78080 -20.84172 -19.68136 -18.79853 -18.45894 -18.42438 -17.68854 -17.52679 -17.38944 -16.97673 -16.77374 -16.50689 -16.46068 -15.86277 -15.83384 -15.71306 -15.47505 -15.11476 -14.89801 -14.69805 -14.47313 -14.18800 -14.02876 -13.91597 -13.77413 -13.60837 -13.56107 -13.35778 -12.66240 -12.55060 -12.33295 -12.13421 -12.05465 -12.00882 -11.79764 -11.67100 -11.50425 -11.05281 -11.03195 -10.96429 -10.40426 -10.35336 -9.97790 -9.33525 -5.06176 -0.11489 0.06133 0.70668 1.19619 1.24129 1.39458 1.54894 1.85982 2.29577 2.32220 2.82944 2.93003 2.97143 3.14903 3.24550 3.31219 3.38635 3.51550 3.58685 3.61972 3.71687 3.77078 3.84852 3.98632 4.06378 4.15063 4.18647 4.27220 4.34643 4.36182 4.38850 4.44758 4.48377 4.54699 4.64795 4.72668 4.74736 4.78067 4.87333 5.06621 5.16188 5.20419 5.37590 5.93085 6.19144 6.54469 6.55625 6.96906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.068 4.068 3 Si 0.684 3.316 4 C -0.107 4.107 5 C -0.066 4.066 6 C -0.199 4.199 7 C 0.161 3.839 8 O -0.273 6.273 9 C 0.037 3.963 10 C 0.518 3.482 11 O -0.505 6.505 12 N -0.726 5.726 13 C 0.116 3.884 14 C 0.080 3.920 15 F -0.183 7.183 16 C -0.142 4.142 17 C -0.108 4.108 18 H 0.105 0.895 19 C 0.085 3.915 20 O -0.573 6.573 21 C -0.146 4.146 22 C -0.121 4.121 23 Br -0.022 7.022 24 C -0.020 4.020 25 H 0.384 0.616 26 H 0.077 0.923 27 H -0.250 1.250 28 H -0.254 1.254 29 H 0.128 0.872 30 H 0.141 0.859 31 H 0.099 0.901 32 H 0.098 0.902 33 H 0.406 0.594 34 H 0.092 0.908 35 H 0.084 0.916 36 H 0.106 0.894 37 H 0.091 0.909 38 H 0.050 0.950 39 H 0.051 0.949 40 H 0.382 0.618 41 H 0.085 0.915 42 H 0.103 0.897 43 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.413 3.829 -1.602 5.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.178 4.178 3 Si 0.585 3.415 4 C -0.108 4.108 5 C -0.084 4.084 6 C -0.218 4.218 7 C 0.112 3.888 8 O -0.184 6.184 9 C -0.042 4.042 10 C 0.302 3.698 11 O -0.378 6.378 12 N -0.381 5.381 13 C -0.008 4.008 14 C 0.061 3.939 15 F -0.164 7.164 16 C -0.180 4.180 17 C -0.127 4.127 18 H 0.124 0.876 19 C 0.007 3.993 20 O -0.379 6.379 21 C -0.184 4.184 22 C -0.201 4.201 23 Br 0.063 6.937 24 C -0.040 4.040 25 H 0.231 0.769 26 H 0.095 0.905 27 H -0.175 1.175 28 H -0.178 1.178 29 H 0.145 0.855 30 H 0.159 0.841 31 H 0.116 0.884 32 H 0.116 0.884 33 H 0.241 0.759 34 H 0.110 0.890 35 H 0.102 0.898 36 H 0.125 0.875 37 H 0.109 0.891 38 H 0.068 0.932 39 H 0.069 0.931 40 H 0.230 0.770 41 H 0.104 0.896 42 H 0.121 0.879 43 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.148 2.799 -0.577 4.252 hybrid contribution 0.678 0.288 0.394 0.835 sum 3.826 3.087 -0.183 4.919 Atomic orbital electron populations 1.86506 1.17047 1.81846 1.49763 1.24619 0.85892 1.10317 0.97015 0.95110 0.80777 0.78028 0.87544 1.19246 1.01363 0.93673 0.96496 1.20811 0.95944 0.99014 0.92675 1.21115 1.06995 0.92956 1.00755 1.18593 0.93167 0.90549 0.86451 1.86276 1.67997 1.35976 1.28151 1.22532 0.98017 0.94138 0.89477 1.19909 0.78468 0.88465 0.82912 1.90816 1.52993 1.15948 1.78060 1.45612 1.57549 1.13907 1.21000 1.21831 1.00233 0.93105 0.85627 1.22073 0.92274 0.82884 0.96676 1.92883 1.82637 1.47397 1.93460 1.23553 0.96210 1.00433 0.97808 1.22511 0.92946 1.00308 0.96917 0.87641 1.22142 0.85215 0.91879 1.00027 1.86485 1.17516 1.38444 1.95479 1.23720 0.92577 1.04615 0.97459 1.21143 1.07748 0.93249 0.97982 1.96802 1.94733 1.04523 1.97609 1.20868 0.94851 0.93481 0.94827 0.76864 0.90527 1.17452 1.17844 0.85460 0.84140 0.88361 0.88389 0.75932 0.88953 0.89771 0.87537 0.89071 0.93193 0.93092 0.77014 0.89627 0.87901 0.83623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.14 12.81 -35.23 -0.45 -0.31 16 2 C -0.07 0.05 2.79 36.00 0.10 0.15 16 3 Si 0.68 -1.30 29.85 -169.99 -5.07 -6.37 16 4 C -0.11 -0.19 5.38 -104.60 -0.56 -0.76 16 5 C -0.07 -0.09 8.66 -39.60 -0.34 -0.44 16 6 C -0.20 -0.18 9.04 -39.43 -0.36 -0.53 16 7 C 0.16 0.47 6.68 -39.20 -0.26 0.21 16 8 O -0.27 -0.94 9.01 -39.37 -0.35 -1.29 16 9 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 10 C 0.52 0.82 7.91 -10.99 -0.09 0.74 16 11 O -0.51 -3.19 16.50 -14.35 -0.24 -3.43 16 12 N -0.73 0.84 5.47 -60.29 -0.33 0.51 16 13 C 0.12 -0.14 5.37 -4.04 -0.02 -0.16 16 14 C 0.08 -0.14 1.67 -89.81 -0.15 -0.29 16 15 F -0.18 -0.09 16.80 2.25 0.04 -0.05 16 16 C -0.14 0.38 7.10 -25.92 -0.18 0.19 16 17 C -0.11 0.17 3.99 -89.81 -0.36 -0.18 16 18 H 0.11 -0.02 8.14 -51.93 -0.42 -0.44 16 19 C 0.09 -0.17 6.88 37.16 0.26 0.09 16 20 O -0.57 0.13 13.66 -35.23 -0.48 -0.35 16 21 C -0.15 0.32 7.08 -25.92 -0.18 0.13 16 22 C -0.12 -0.44 6.24 -39.38 -0.25 -0.69 16 23 Br -0.02 -0.10 33.16 -68.01 -2.26 -2.35 16 24 C -0.02 -0.05 9.42 -39.58 -0.37 -0.42 16 25 H 0.38 -2.03 8.74 45.56 0.40 -1.63 16 26 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 27 H -0.25 -0.26 7.05 56.52 0.40 0.14 16 28 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 29 H 0.13 0.03 4.86 -52.49 -0.26 -0.22 16 30 H 0.14 -0.32 6.30 -52.49 -0.33 -0.65 16 31 H 0.10 -0.28 7.65 -51.93 -0.40 -0.68 16 32 H 0.10 -0.32 7.67 -51.93 -0.40 -0.72 16 33 H 0.41 -1.38 8.19 -40.82 -0.33 -1.71 16 34 H 0.09 -0.14 7.94 -51.93 -0.41 -0.56 16 35 H 0.08 -0.02 8.14 -51.92 -0.42 -0.45 16 36 H 0.11 -0.44 8.06 -51.93 -0.42 -0.86 16 37 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 38 H 0.05 -0.16 7.84 -51.93 -0.41 -0.56 16 39 H 0.05 -0.14 8.14 -51.92 -0.42 -0.56 16 40 H 0.38 -1.65 9.12 45.56 0.42 -1.23 16 41 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.10 -0.31 7.72 -51.93 -0.40 -0.71 16 43 H 0.15 0.20 8.06 -52.49 -0.42 -0.23 16 LS Contribution 385.63 15.07 5.81 5.81 Total: 0.00 -11.58 385.63 -10.61 -22.19 By element: Atomic # 1 Polarization: -7.88 SS G_CDS: -4.69 Total: -12.57 kcal Atomic # 6 Polarization: 0.79 SS G_CDS: -2.58 Total: -1.80 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.33 Total: 0.51 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -1.52 Total: -5.38 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.04 Total: -0.05 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.07 Total: -6.37 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.58 -10.61 -22.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.450 kcal (2) G-P(sol) polarization free energy of solvation -11.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds