Wall clock time and date at job start Sun Mar 7 2021 09:00:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47238 * 2 1 4 4 C 1.50697 * 109.46917 * 120.00167 * 2 1 3 5 5 C 1.38239 * 119.93731 * 245.01812 * 4 2 1 6 6 C 1.38190 * 120.06847 * 179.74647 * 5 4 2 7 7 C 1.38684 * 119.95717 * 0.52974 * 6 5 4 8 8 O 1.35911 * 120.06011 * 179.72203 * 7 6 5 9 9 C 1.42898 * 117.00108 * 359.72833 * 8 7 6 10 10 C 1.50706 * 109.47059 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99854 * 0.02562 * 10 9 8 12 12 N 1.34767 * 120.00164 * 179.97438 * 10 9 8 13 13 C 1.46500 * 120.00310 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.47092 * 180.02562 * 13 12 10 15 15 F 1.39895 * 112.91111 * 48.74636 * 14 13 12 16 16 C 1.53781 * 113.61201 * 179.97438 * 14 13 12 17 17 C 1.53776 * 87.08215 * 139.97787 * 16 14 13 18 18 H 1.09004 * 113.61390 * 89.20040 * 17 16 14 19 19 C 1.52999 * 113.61491 * 220.02020 * 17 16 14 20 20 O 1.42903 * 109.47256 * 185.00283 * 19 17 16 21 21 C 1.53780 * 87.08254 * 334.56758 * 17 16 14 22 22 C 1.38832 * 119.87734 * 359.45216 * 7 6 5 23 23 Br 1.89103 * 120.03606 * 180.29504 * 22 7 6 24 24 C 1.38197 * 119.93088 * 0.27013 * 22 7 6 25 25 H 0.96701 * 114.00033 * 59.99681 * 1 2 3 26 26 H 1.09001 * 109.46665 * 239.99943 * 2 1 3 27 27 H 1.48504 * 110.00025 * 59.99946 * 3 2 1 28 28 H 1.48497 * 110.00049 * 181.32184 * 3 2 1 29 29 H 1.07994 * 119.96598 * 0.02562 * 5 4 2 30 30 H 1.07997 * 120.02528 * 180.25664 * 6 5 4 31 31 H 1.08994 * 109.46954 * 60.00188 * 9 8 7 32 32 H 1.09000 * 109.46873 * 299.99564 * 9 8 7 33 33 H 0.97001 * 120.00155 * 0.02562 * 12 10 9 34 34 H 1.08998 * 109.47238 * 59.99909 * 13 12 10 35 35 H 1.09008 * 109.46880 * 300.00108 * 13 12 10 36 36 H 1.08998 * 113.61701 * 25.42834 * 16 14 13 37 37 H 1.09000 * 113.69243 * 254.54099 * 16 14 13 38 38 H 1.08997 * 109.47286 * 64.99843 * 19 17 16 39 39 H 1.09008 * 109.47201 * 304.99623 * 19 17 16 40 40 H 0.96700 * 114.00311 * 180.02562 * 20 19 17 41 41 H 1.08997 * 113.61633 * 139.97829 * 21 17 16 42 42 H 1.09002 * 113.61577 * 270.88412 * 21 17 16 43 43 H 1.07997 * 119.98016 * 179.97438 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6383 -0.0110 2.1906 6 6 3.0956 -0.6586 3.3225 7 6 2.8545 -2.0140 3.4899 8 8 3.3082 -2.6543 4.5996 9 6 4.0317 -1.8705 5.5505 10 6 4.4513 -2.7432 6.7054 11 8 4.1599 -3.9205 6.7130 12 7 5.1512 -2.2156 7.7291 13 6 5.5596 -3.0640 8.8514 14 6 6.3341 -2.2248 9.8697 15 9 5.6829 -1.0316 10.1999 16 6 6.8098 -3.0256 11.0933 17 6 8.1203 -2.2254 11.0092 18 1 8.1019 -1.2963 11.5789 19 6 9.3697 -3.0651 11.2822 20 8 10.5198 -2.2170 11.2967 21 6 7.8183 -2.0388 9.5129 22 6 2.1440 -2.7145 2.5245 23 35 1.8054 -4.5610 2.7522 24 6 1.6839 -2.0608 1.3972 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5139 -0.8900 27 1 1.5615 2.4679 1.2085 28 1 3.5346 1.7702 -0.0322 29 1 2.8294 1.0436 2.0583 30 1 3.6442 -0.1106 4.0742 31 1 3.3952 -1.0651 5.9168 32 1 4.9161 -1.4471 5.0746 33 1 5.3846 -1.2742 7.7229 34 1 6.1957 -3.8698 8.4852 35 1 4.6750 -3.4873 9.3276 36 1 6.9350 -4.0903 10.8967 37 1 6.2342 -2.8271 11.9974 38 1 9.4814 -3.8154 10.4994 39 1 9.2710 -3.5599 12.2484 40 1 11.3503 -2.6832 11.4644 41 1 8.0562 -1.0424 9.1404 42 1 8.2192 -2.8337 8.8841 43 1 1.1314 -2.6050 0.6455 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:05 Heat of formation + Delta-G solvation = -137.722497 kcal Electronic energy + Delta-G solvation = -28847.976859 eV Core-core repulsion = 24243.175970 eV Total energy + Delta-G solvation = -4604.800889 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.051 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -48.92032 -41.80333 -40.79356 -39.85194 -39.10092 -37.31231 -37.19563 -35.75533 -33.78492 -32.19384 -31.26701 -30.48312 -29.27111 -27.18145 -26.91589 -26.20106 -24.14979 -22.47191 -22.24158 -21.81789 -20.70904 -19.74116 -18.81261 -18.36462 -18.29778 -17.69889 -17.56967 -17.36483 -16.91603 -16.77085 -16.42658 -16.40213 -15.93010 -15.88730 -15.68167 -15.45833 -15.04439 -14.88350 -14.72940 -14.45729 -14.19737 -14.02824 -13.93374 -13.74820 -13.60799 -13.45024 -13.23372 -12.66393 -12.43119 -12.34584 -12.20954 -12.02677 -11.92680 -11.92000 -11.56630 -11.37500 -11.29768 -11.11287 -10.84115 -10.37856 -10.30947 -10.10329 -9.45048 -4.90696 -0.23902 -0.02531 0.51041 1.23825 1.32084 1.32251 1.67791 1.96295 2.21633 2.32978 2.99766 3.07764 3.09470 3.28556 3.31047 3.37911 3.49826 3.53296 3.61051 3.79365 3.83077 3.92196 3.92952 3.95079 4.18486 4.20075 4.32295 4.40574 4.42374 4.51615 4.52451 4.57242 4.60267 4.68424 4.69435 4.79427 4.81240 4.87172 4.95006 5.07556 5.11211 5.31561 5.34447 5.88919 6.24445 6.86029 6.91686 6.95071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.080 4.080 3 Si 0.775 3.225 4 C -0.119 4.119 5 C -0.076 4.076 6 C -0.191 4.191 7 C 0.149 3.851 8 O -0.299 6.299 9 C 0.031 3.969 10 C 0.517 3.483 11 O -0.561 6.561 12 N -0.712 5.712 13 C 0.115 3.885 14 C 0.081 3.919 15 F -0.197 7.197 16 C -0.136 4.136 17 C -0.114 4.114 18 H 0.086 0.914 19 C 0.083 3.917 20 O -0.599 6.599 21 C -0.140 4.140 22 C -0.140 4.140 23 Br -0.041 7.041 24 C -0.030 4.030 25 H 0.404 0.596 26 H 0.094 0.906 27 H -0.290 1.290 28 H -0.282 1.282 29 H 0.138 0.862 30 H 0.174 0.826 31 H 0.126 0.874 32 H 0.131 0.869 33 H 0.418 0.582 34 H 0.098 0.902 35 H 0.073 0.927 36 H 0.125 0.875 37 H 0.088 0.912 38 H 0.064 0.936 39 H 0.058 0.942 40 H 0.397 0.603 41 H 0.080 0.920 42 H 0.115 0.885 43 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.074 5.038 -2.071 6.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.189 4.189 3 Si 0.680 3.320 4 C -0.120 4.120 5 C -0.094 4.094 6 C -0.210 4.210 7 C 0.101 3.899 8 O -0.211 6.211 9 C -0.047 4.047 10 C 0.303 3.697 11 O -0.439 6.439 12 N -0.366 5.366 13 C -0.009 4.009 14 C 0.062 3.938 15 F -0.178 7.178 16 C -0.174 4.174 17 C -0.133 4.133 18 H 0.105 0.895 19 C 0.005 3.995 20 O -0.407 6.407 21 C -0.178 4.178 22 C -0.220 4.220 23 Br 0.044 6.956 24 C -0.049 4.049 25 H 0.255 0.745 26 H 0.112 0.888 27 H -0.217 1.217 28 H -0.209 1.209 29 H 0.155 0.845 30 H 0.191 0.809 31 H 0.143 0.857 32 H 0.149 0.851 33 H 0.256 0.744 34 H 0.116 0.884 35 H 0.091 0.909 36 H 0.143 0.857 37 H 0.107 0.893 38 H 0.083 0.917 39 H 0.076 0.924 40 H 0.247 0.753 41 H 0.099 0.901 42 H 0.133 0.867 43 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.818 4.036 -1.057 5.655 hybrid contribution 0.500 -0.027 0.590 0.774 sum 4.318 4.009 -0.467 5.910 Atomic orbital electron populations 1.86454 1.17228 1.82498 1.51408 1.24866 0.85959 1.11477 0.96612 0.94041 0.77637 0.75097 0.85235 1.19653 1.01186 0.93587 0.97596 1.21071 0.95909 0.99590 0.92860 1.21449 1.06259 0.92160 1.01180 1.18719 0.93507 0.91289 0.86364 1.86237 1.68623 1.37528 1.28755 1.22830 0.99591 0.93770 0.88460 1.20334 0.77820 0.87959 0.83584 1.90792 1.55423 1.18315 1.79330 1.45546 1.56299 1.14541 1.20226 1.21857 0.99975 0.93405 0.85621 1.22125 0.92229 0.82384 0.97033 1.92855 1.82984 1.48316 1.93606 1.23577 0.95314 1.01244 0.97226 1.22488 0.93821 0.99877 0.97074 0.89536 1.22233 0.84479 0.91782 1.00964 1.86438 1.18787 1.39880 1.95625 1.23721 0.91959 1.04802 0.97297 1.21324 1.09023 0.92530 0.99094 1.96758 1.94887 1.06256 1.97706 1.20970 0.95191 0.94017 0.94747 0.74458 0.88771 1.21713 1.20892 0.84462 0.80869 0.85671 0.85148 0.74437 0.88353 0.90850 0.85713 0.89315 0.91746 0.92394 0.75276 0.90118 0.86650 0.83289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.66 12.81 -148.98 -1.91 -1.25 16 2 C -0.08 0.17 2.79 71.24 0.20 0.36 16 3 Si 0.78 -3.66 29.85 68.60 2.05 -1.61 16 4 C -0.12 -0.42 5.38 -19.85 -0.11 -0.53 16 5 C -0.08 -0.16 8.66 22.26 0.19 0.03 16 6 C -0.19 -0.15 9.04 22.36 0.20 0.05 16 7 C 0.15 0.91 6.68 22.52 0.15 1.06 16 8 O -0.30 -2.18 9.01 -73.51 -0.66 -2.84 16 9 C 0.03 -0.06 5.22 71.24 0.37 0.31 16 10 C 0.52 1.74 7.91 87.66 0.69 2.43 16 11 O -0.56 -7.90 16.50 16.00 0.26 -7.64 16 12 N -0.71 1.87 5.47 -463.05 -2.53 -0.66 16 13 C 0.12 -0.27 5.37 86.38 0.46 0.19 16 14 C 0.08 -0.30 1.67 -10.27 -0.02 -0.31 16 15 F -0.20 -0.21 16.80 44.97 0.76 0.54 16 16 C -0.14 0.76 7.10 31.12 0.22 0.98 16 17 C -0.11 0.37 3.99 -10.27 -0.04 0.33 16 18 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 19 C 0.08 -0.37 6.88 71.98 0.50 0.13 16 20 O -0.60 0.36 13.66 -148.98 -2.04 -1.68 16 21 C -0.14 0.67 7.08 31.12 0.22 0.89 16 22 C -0.14 -1.17 6.24 22.40 0.14 -1.03 16 23 Br -0.04 -0.43 33.16 -20.37 -0.68 -1.10 16 24 C -0.03 -0.17 9.42 22.27 0.21 0.04 16 25 H 0.40 -4.72 8.74 -74.06 -0.65 -5.36 16 26 H 0.09 -0.55 7.96 -2.39 -0.02 -0.57 16 27 H -0.29 -0.54 7.05 99.48 0.70 0.16 16 28 H -0.28 0.02 7.11 99.48 0.71 0.72 16 29 H 0.14 -0.06 4.86 -2.91 -0.01 -0.07 16 30 H 0.17 -1.22 6.30 -2.91 -0.02 -1.24 16 31 H 0.13 -0.95 7.65 -2.39 -0.02 -0.96 16 32 H 0.13 -1.14 7.67 -2.39 -0.02 -1.15 16 33 H 0.42 -3.23 8.19 -92.71 -0.76 -3.99 16 34 H 0.10 -0.32 7.94 -2.39 -0.02 -0.34 16 35 H 0.07 0.02 8.14 -2.38 -0.02 0.00 16 36 H 0.12 -1.16 8.06 -2.39 -0.02 -1.18 16 37 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 38 H 0.06 -0.48 7.84 -2.39 -0.02 -0.50 16 39 H 0.06 -0.35 8.14 -2.38 -0.02 -0.37 16 40 H 0.40 -3.51 9.12 -74.06 -0.68 -4.18 16 41 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.12 -0.83 7.72 -2.39 -0.02 -0.85 16 43 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 Total: 0.00 -29.03 385.63 -2.31 -31.34 By element: Atomic # 1 Polarization: -19.09 SS G_CDS: -0.96 Total: -20.05 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: 3.39 Total: 4.94 kcal Atomic # 7 Polarization: 1.87 SS G_CDS: -2.53 Total: -0.66 kcal Atomic # 8 Polarization: -9.07 SS G_CDS: -4.34 Total: -13.41 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.76 Total: 0.54 kcal Atomic # 14 Polarization: -3.66 SS G_CDS: 2.05 Total: -1.61 kcal Atomic # 35 Polarization: -0.43 SS G_CDS: -0.68 Total: -1.10 kcal Total: -29.03 -2.31 -31.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.379 kcal (2) G-P(sol) polarization free energy of solvation -29.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.310 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.343 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds