Wall clock time and date at job start Sun Mar 7 2021 09:00:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35973 * 116.99608 * 2 1 4 4 C 1.39441 * 120.11711 * 180.02562 * 3 2 1 5 5 O 1.34775 * 133.24624 * 359.97438 * 4 3 2 6 6 C 1.34938 * 110.84257 * 179.24678 * 5 4 3 7 7 C 1.46991 * 125.13718 * 180.08343 * 6 5 4 8 8 O 1.21658 * 119.99489 * 180.66820 * 7 6 5 9 9 N 1.34772 * 120.00329 * 0.66581 * 7 6 5 10 10 C 1.46503 * 120.00294 * 180.02562 * 9 7 6 11 11 C 1.52998 * 109.47485 * 180.02562 * 10 9 7 12 12 F 1.39906 * 112.84688 * 316.19638 * 11 10 9 13 13 C 1.53774 * 113.61436 * 87.50333 * 11 10 9 14 14 C 1.53779 * 87.08317 * 139.98204 * 13 11 10 15 15 H 1.09000 * 113.61241 * 89.11472 * 14 13 11 16 16 C 1.52990 * 113.69272 * 220.00719 * 14 13 11 17 17 O 1.42900 * 109.47302 * 272.53350 * 16 14 13 18 18 C 1.53778 * 113.61426 * 185.00133 * 11 10 9 19 19 C 1.35810 * 109.71681 * 0.66238 * 6 5 4 20 20 C 1.40611 * 119.13787 * 179.68291 * 4 3 2 21 21 C 1.39785 * 120.11374 * 0.56511 * 20 4 3 22 22 C 1.50699 * 120.09281 * 179.72554 * 21 20 4 23 23 O 1.42903 * 109.47152 * 284.72862 * 22 21 20 24 24 Si 1.86293 * 109.47431 * 164.72754 * 22 21 20 25 25 C 1.36630 * 119.81368 * 359.45042 * 21 20 4 26 26 C 1.38261 * 120.12108 * 359.97438 * 3 2 1 27 27 H 1.09000 * 109.46931 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.46978 * 299.99862 * 1 2 3 29 29 H 1.09000 * 109.47308 * 60.00011 * 1 2 3 30 30 H 0.97003 * 120.00030 * 0.02562 * 9 7 6 31 31 H 1.09000 * 109.47125 * 300.00268 * 10 9 7 32 32 H 1.09001 * 109.46822 * 59.99948 * 10 9 7 33 33 H 1.09006 * 113.61481 * 254.52968 * 13 11 10 34 34 H 1.09000 * 113.61901 * 25.43174 * 13 11 10 35 35 H 1.09003 * 109.47189 * 32.53125 * 16 14 13 36 36 H 1.09001 * 109.47365 * 152.53510 * 16 14 13 37 37 H 0.96698 * 114.00659 * 179.97438 * 17 16 14 38 38 H 1.09003 * 113.61560 * 334.56328 * 18 11 10 39 39 H 1.08998 * 113.61571 * 105.46852 * 18 11 10 40 40 H 1.07998 * 126.95191 * 179.43732 * 19 6 5 41 41 H 1.09008 * 109.47393 * 44.72257 * 22 21 20 42 42 H 0.96700 * 114.00311 * 180.02562 * 23 22 21 43 43 H 1.48506 * 109.99973 * 59.99460 * 24 22 21 44 44 H 1.48493 * 110.00375 * 181.31561 * 24 22 21 45 45 H 1.08002 * 119.75070 * 180.27656 * 25 21 20 46 46 H 1.07993 * 119.66262 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2116 0.0000 4 6 3.4386 1.2875 -0.0005 5 8 4.4141 0.3575 -0.0007 6 6 5.6317 0.9389 -0.0179 7 6 6.9130 0.2186 -0.0247 8 8 7.9594 0.8391 -0.0282 9 7 6.9286 -1.1290 -0.0270 10 6 8.2057 -1.8468 -0.0333 11 6 7.9436 -3.3542 -0.0354 12 9 6.9371 -3.7318 0.8600 13 6 7.7723 -3.9476 -1.4437 14 6 8.5902 -5.1526 -0.9499 15 1 7.9823 -5.9395 -0.5033 16 6 9.5855 -5.6848 -1.9827 17 8 8.9362 -6.6435 -2.8202 18 6 9.2214 -4.2018 0.0809 19 6 5.4943 2.2900 -0.0150 20 6 4.0554 2.5511 -0.0073 21 6 3.2764 3.7118 -0.0015 22 6 3.9379 5.0658 -0.0025 23 8 4.4613 5.3412 1.2984 24 14 2.6860 6.3684 -0.4568 25 6 1.9135 3.6152 -0.0006 26 6 1.2956 2.3727 -0.0005 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 6.0942 -1.6237 -0.0246 31 1 8.7707 -1.5754 -0.9250 32 1 8.7776 -1.5784 0.8550 33 1 6.7396 -4.1930 -1.6915 34 1 8.2705 -3.3719 -2.2237 35 1 9.9527 -4.8593 -2.5925 36 1 10.4229 -6.1583 -1.4701 37 1 9.5087 -7.0235 -3.5004 38 1 10.1158 -3.6956 -0.2823 39 1 9.3585 -4.6523 1.0639 40 1 6.2873 3.0232 -0.0174 41 1 4.7499 5.0730 -0.7298 42 1 4.9020 6.1989 1.3716 43 1 1.5736 6.3688 0.5272 44 1 3.3331 7.7044 -0.4923 45 1 1.3126 4.5126 -0.0006 46 1 0.2174 2.3120 -0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:16 Heat of formation + Delta-G solvation = -130.744476 kcal Electronic energy + Delta-G solvation = -32814.397503 eV Core-core repulsion = 27974.582734 eV Total energy + Delta-G solvation = -4839.814769 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.140 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -48.86571 -43.61085 -40.91487 -40.38751 -39.81253 -38.96618 -37.28606 -37.16466 -35.74368 -33.53258 -32.00786 -31.31285 -30.21526 -28.67700 -27.43515 -27.12549 -26.21735 -24.60508 -23.90444 -22.31204 -21.87524 -21.56830 -20.79997 -19.75457 -18.83721 -18.56380 -18.48990 -18.36551 -17.62296 -17.54344 -17.06111 -16.96164 -16.64235 -16.56903 -16.43634 -16.28439 -15.86179 -15.73417 -15.62314 -15.23593 -14.93466 -14.60037 -14.45372 -14.27369 -14.09312 -13.99166 -13.87971 -13.84370 -13.57187 -13.37570 -13.28907 -13.19948 -12.63773 -12.46832 -12.41505 -12.05533 -12.00417 -11.71501 -11.69077 -11.43598 -11.34650 -10.95237 -10.89893 -10.49469 -10.33869 -9.71502 -8.93145 -5.00689 -0.54554 0.18629 0.74750 1.21329 1.32544 1.54402 1.88841 1.89715 2.06762 2.09791 2.42504 2.88564 2.98609 3.04582 3.20977 3.23891 3.36548 3.44786 3.60204 3.66368 3.69615 3.88685 3.99620 4.02440 4.12528 4.14793 4.14969 4.19197 4.21009 4.32606 4.34686 4.40537 4.43110 4.48515 4.50573 4.51350 4.55162 4.71638 4.81284 4.84183 4.88061 4.93795 5.08765 5.11437 5.26998 5.30677 5.37484 5.66664 6.17907 6.31943 6.43411 6.59924 6.89498 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.047 3.953 5 O -0.173 6.173 6 C -0.024 4.024 7 C 0.605 3.395 8 O -0.510 6.510 9 N -0.715 5.715 10 C 0.112 3.888 11 C 0.079 3.921 12 F -0.182 7.182 13 C -0.146 4.146 14 C -0.109 4.109 15 H 0.105 0.895 16 C 0.086 3.914 17 O -0.573 6.573 18 C -0.141 4.141 19 C -0.102 4.102 20 C -0.083 4.083 21 C -0.050 4.050 22 C -0.075 4.075 23 O -0.533 6.533 24 Si 0.688 3.312 25 C -0.090 4.090 26 C -0.177 4.177 27 H 0.105 0.895 28 H 0.060 0.940 29 H 0.061 0.939 30 H 0.413 0.587 31 H 0.095 0.905 32 H 0.087 0.913 33 H 0.086 0.914 34 H 0.103 0.897 35 H 0.050 0.950 36 H 0.050 0.950 37 H 0.382 0.618 38 H 0.106 0.894 39 H 0.090 0.910 40 H 0.173 0.827 41 H 0.077 0.923 42 H 0.380 0.620 43 H -0.253 1.253 44 H -0.259 1.259 45 H 0.140 0.860 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.113 -0.175 -4.172 4.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.001 4.001 5 O -0.074 6.074 6 C -0.074 4.074 7 C 0.390 3.610 8 O -0.387 6.387 9 N -0.367 5.367 10 C -0.012 4.012 11 C 0.061 3.939 12 F -0.162 7.162 13 C -0.184 4.184 14 C -0.127 4.127 15 H 0.123 0.877 16 C 0.008 3.992 17 O -0.379 6.379 18 C -0.180 4.180 19 C -0.123 4.123 20 C -0.084 4.084 21 C -0.051 4.051 22 C -0.184 4.184 23 O -0.340 6.340 24 Si 0.589 3.411 25 C -0.108 4.108 26 C -0.195 4.195 27 H 0.124 0.876 28 H 0.079 0.921 29 H 0.080 0.920 30 H 0.249 0.751 31 H 0.113 0.887 32 H 0.105 0.895 33 H 0.105 0.895 34 H 0.121 0.879 35 H 0.068 0.932 36 H 0.069 0.931 37 H 0.229 0.771 38 H 0.125 0.875 39 H 0.109 0.891 40 H 0.190 0.810 41 H 0.095 0.905 42 H 0.228 0.772 43 H -0.178 1.178 44 H -0.184 1.184 45 H 0.158 0.842 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -1.505 0.031 -3.389 3.708 hybrid contribution 0.637 0.130 0.632 0.907 sum -0.868 0.161 -2.757 2.895 Atomic orbital electron populations 1.23193 0.77333 1.04753 1.01797 1.86182 1.22149 1.25624 1.88363 1.17735 0.86484 0.85896 0.99426 1.18740 0.87458 0.86843 1.07060 1.84064 1.12614 1.34676 1.76075 1.21860 0.83888 0.92519 1.09172 1.16572 0.85566 0.81828 0.76999 1.90919 1.30345 1.67437 1.50015 1.45721 1.10483 1.05898 1.74586 1.21932 0.86118 0.88451 1.04690 1.22075 0.88324 0.93125 0.90414 1.92891 1.61752 1.92356 1.69245 1.23738 1.03028 0.96752 0.94888 1.22507 0.97636 0.96742 0.95813 0.87654 1.22136 0.94115 0.91339 0.91622 1.86491 1.42257 1.59880 1.49259 1.23563 0.96566 0.96567 1.01255 1.22688 0.94717 0.94225 1.00644 1.19395 0.92613 0.92110 1.04282 1.18332 0.92358 0.91989 1.02416 1.24782 1.04875 1.00579 0.88174 1.86625 1.76775 1.41073 1.29549 0.94977 0.79631 0.76923 0.89541 1.20525 0.93354 0.97797 0.99135 1.20953 1.00389 0.90422 1.07782 0.87644 0.92149 0.92006 0.75090 0.88695 0.89493 0.89529 0.87863 0.93190 0.93128 0.77067 0.87515 0.89087 0.80951 0.90514 0.77200 1.17754 1.18414 0.84247 0.83381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.70 10.50 -19.66 -0.21 -0.90 16 3 C 0.15 0.39 6.70 -39.12 -0.26 0.13 16 4 C 0.05 0.20 7.35 -38.24 -0.28 -0.09 16 5 O -0.17 -0.74 10.28 2.63 0.03 -0.71 16 6 C -0.02 -0.09 7.07 -36.91 -0.26 -0.35 16 7 C 0.60 2.17 7.80 -12.72 -0.10 2.07 16 8 O -0.51 -3.00 16.83 5.23 0.09 -2.92 16 9 N -0.71 -0.98 5.45 -61.52 -0.34 -1.31 16 10 C 0.11 -0.03 5.42 -4.04 -0.02 -0.06 16 11 C 0.08 -0.06 1.74 -89.81 -0.16 -0.21 16 12 F -0.18 -0.35 16.58 2.25 0.04 -0.31 16 13 C -0.15 0.17 7.08 -25.92 -0.18 -0.02 16 14 C -0.11 0.10 3.98 -89.81 -0.36 -0.25 16 15 H 0.11 0.06 8.14 -51.93 -0.42 -0.37 16 16 C 0.09 -0.14 6.89 37.15 0.26 0.12 16 17 O -0.57 -0.11 13.66 -35.23 -0.48 -0.59 16 18 C -0.14 0.31 7.10 -25.92 -0.18 0.12 16 19 C -0.10 -0.35 10.68 -37.23 -0.40 -0.75 16 20 C -0.08 -0.29 6.16 -105.21 -0.65 -0.94 16 21 C -0.05 -0.10 5.30 -104.63 -0.55 -0.66 16 22 C -0.07 -0.03 2.70 36.01 0.10 0.07 16 23 O -0.53 -0.88 12.86 -35.23 -0.45 -1.34 16 24 Si 0.69 -0.83 30.20 -169.99 -5.13 -5.96 16 25 C -0.09 -0.06 8.62 -39.97 -0.34 -0.40 16 26 C -0.18 -0.07 9.03 -39.38 -0.36 -0.42 16 27 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 28 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 29 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 30 H 0.41 0.34 7.74 -40.82 -0.32 0.03 16 31 H 0.09 -0.12 7.84 -51.93 -0.41 -0.53 16 32 H 0.09 0.00 8.14 -51.93 -0.42 -0.43 16 33 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.10 -0.24 7.65 -51.93 -0.40 -0.64 16 35 H 0.05 -0.14 7.85 -51.93 -0.41 -0.55 16 36 H 0.05 -0.12 8.14 -51.93 -0.42 -0.55 16 37 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 38 H 0.11 -0.42 8.06 -51.93 -0.42 -0.84 16 39 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.17 0.38 8.06 -52.49 -0.42 -0.04 16 41 H 0.08 -0.08 7.96 -51.92 -0.41 -0.50 16 42 H 0.38 -0.92 8.74 45.56 0.40 -0.53 16 43 H -0.25 -0.31 6.75 56.52 0.38 0.07 16 44 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 45 H 0.14 -0.18 4.85 -52.49 -0.25 -0.43 16 46 H 0.15 -0.38 6.26 -52.49 -0.33 -0.71 16 LS Contribution 391.94 15.07 5.91 5.91 Total: 0.00 -10.36 391.94 -8.41 -18.77 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -5.10 Total: -9.94 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.76 Total: -0.69 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.34 Total: -1.31 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -1.03 Total: -6.46 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.13 Total: -5.96 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -10.36 -8.41 -18.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.971 kcal (2) G-P(sol) polarization free energy of solvation -10.358 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.773 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.744 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds