Wall clock time and date at job start Sun Mar 7 2021 09:00:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35973 * 116.99608 * 2 1 4 4 C 1.39441 * 120.11711 * 180.02562 * 3 2 1 5 5 O 1.34775 * 133.24624 * 359.97438 * 4 3 2 6 6 C 1.34938 * 110.84257 * 179.24678 * 5 4 3 7 7 C 1.46991 * 125.13718 * 180.08343 * 6 5 4 8 8 O 1.21658 * 119.99489 * 180.66820 * 7 6 5 9 9 N 1.34772 * 120.00329 * 0.66581 * 7 6 5 10 10 C 1.46503 * 120.00294 * 180.02562 * 9 7 6 11 11 C 1.52998 * 109.47485 * 180.02562 * 10 9 7 12 12 F 1.39906 * 112.84688 * 316.19638 * 11 10 9 13 13 C 1.53774 * 113.61436 * 87.50333 * 11 10 9 14 14 C 1.53779 * 87.08317 * 139.98204 * 13 11 10 15 15 H 1.09000 * 113.61241 * 89.11472 * 14 13 11 16 16 C 1.52990 * 113.69272 * 220.00719 * 14 13 11 17 17 O 1.42900 * 109.47302 * 272.53350 * 16 14 13 18 18 C 1.53778 * 113.61426 * 185.00133 * 11 10 9 19 19 C 1.35810 * 109.71681 * 0.66238 * 6 5 4 20 20 C 1.40611 * 119.13787 * 179.68291 * 4 3 2 21 21 C 1.39785 * 120.11374 * 0.56511 * 20 4 3 22 22 C 1.50699 * 120.09281 * 179.72554 * 21 20 4 23 23 O 1.42903 * 109.47152 * 284.72862 * 22 21 20 24 24 Si 1.86293 * 109.47431 * 164.72754 * 22 21 20 25 25 C 1.36630 * 119.81368 * 359.45042 * 21 20 4 26 26 C 1.38261 * 120.12108 * 359.97438 * 3 2 1 27 27 H 1.09000 * 109.46931 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.46978 * 299.99862 * 1 2 3 29 29 H 1.09000 * 109.47308 * 60.00011 * 1 2 3 30 30 H 0.97003 * 120.00030 * 0.02562 * 9 7 6 31 31 H 1.09000 * 109.47125 * 300.00268 * 10 9 7 32 32 H 1.09001 * 109.46822 * 59.99948 * 10 9 7 33 33 H 1.09006 * 113.61481 * 254.52968 * 13 11 10 34 34 H 1.09000 * 113.61901 * 25.43174 * 13 11 10 35 35 H 1.09003 * 109.47189 * 32.53125 * 16 14 13 36 36 H 1.09001 * 109.47365 * 152.53510 * 16 14 13 37 37 H 0.96698 * 114.00659 * 179.97438 * 17 16 14 38 38 H 1.09003 * 113.61560 * 334.56328 * 18 11 10 39 39 H 1.08998 * 113.61571 * 105.46852 * 18 11 10 40 40 H 1.07998 * 126.95191 * 179.43732 * 19 6 5 41 41 H 1.09008 * 109.47393 * 44.72257 * 22 21 20 42 42 H 0.96700 * 114.00311 * 180.02562 * 23 22 21 43 43 H 1.48506 * 109.99973 * 59.99460 * 24 22 21 44 44 H 1.48493 * 110.00375 * 181.31561 * 24 22 21 45 45 H 1.08002 * 119.75070 * 180.27656 * 25 21 20 46 46 H 1.07993 * 119.66262 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2116 0.0000 4 6 3.4386 1.2875 -0.0005 5 8 4.4141 0.3575 -0.0007 6 6 5.6317 0.9389 -0.0179 7 6 6.9130 0.2186 -0.0247 8 8 7.9594 0.8391 -0.0282 9 7 6.9286 -1.1290 -0.0270 10 6 8.2057 -1.8468 -0.0333 11 6 7.9436 -3.3542 -0.0354 12 9 6.9371 -3.7318 0.8600 13 6 7.7723 -3.9476 -1.4437 14 6 8.5902 -5.1526 -0.9499 15 1 7.9823 -5.9395 -0.5033 16 6 9.5855 -5.6848 -1.9827 17 8 8.9362 -6.6435 -2.8202 18 6 9.2214 -4.2018 0.0809 19 6 5.4943 2.2900 -0.0150 20 6 4.0554 2.5511 -0.0073 21 6 3.2764 3.7118 -0.0015 22 6 3.9379 5.0658 -0.0025 23 8 4.4613 5.3412 1.2984 24 14 2.6860 6.3684 -0.4568 25 6 1.9135 3.6152 -0.0006 26 6 1.2956 2.3727 -0.0005 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 6.0942 -1.6237 -0.0246 31 1 8.7707 -1.5754 -0.9250 32 1 8.7776 -1.5784 0.8550 33 1 6.7396 -4.1930 -1.6915 34 1 8.2705 -3.3719 -2.2237 35 1 9.9527 -4.8593 -2.5925 36 1 10.4229 -6.1583 -1.4701 37 1 9.5087 -7.0235 -3.5004 38 1 10.1158 -3.6956 -0.2823 39 1 9.3585 -4.6523 1.0639 40 1 6.2873 3.0232 -0.0174 41 1 4.7499 5.0730 -0.7298 42 1 4.9020 6.1989 1.3716 43 1 1.5736 6.3688 0.5272 44 1 3.3331 7.7044 -0.4923 45 1 1.3126 4.5126 -0.0006 46 1 0.2174 2.3120 -0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:15 Heat of formation + Delta-G solvation = -134.962244 kcal Electronic energy + Delta-G solvation = -32814.580399 eV Core-core repulsion = 27974.582734 eV Total energy + Delta-G solvation = -4839.997665 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.140 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -48.93612 -43.79910 -41.07248 -40.48715 -39.79670 -39.02440 -37.24046 -37.22111 -35.89153 -33.71113 -32.10701 -31.41981 -30.22943 -28.59520 -27.39093 -27.01403 -26.23637 -24.72165 -24.05053 -22.28686 -22.00969 -21.73842 -20.73983 -19.88568 -18.95526 -18.60862 -18.56020 -18.28146 -17.81774 -17.61157 -17.15158 -17.00906 -16.66201 -16.58714 -16.44226 -16.31672 -15.95308 -15.83786 -15.62289 -15.23585 -14.92876 -14.69553 -14.57704 -14.31767 -14.23515 -14.01641 -13.95230 -13.84879 -13.43876 -13.39412 -13.24507 -13.23206 -12.55693 -12.41371 -12.39856 -12.08006 -11.99702 -11.78797 -11.74334 -11.40442 -11.37855 -11.06504 -10.82404 -10.50792 -10.47613 -9.87823 -9.04257 -4.90356 -0.72340 0.05716 0.56197 1.12806 1.28655 1.61773 1.76407 1.81465 1.93820 2.10229 2.32880 2.97945 3.05164 3.07200 3.17140 3.31472 3.35487 3.50783 3.52691 3.68617 3.77388 3.80004 3.91167 3.95349 4.10926 4.21113 4.29953 4.33858 4.35010 4.39909 4.40584 4.41915 4.50348 4.58475 4.61257 4.69501 4.74113 4.79393 4.80413 4.82910 4.84977 4.95208 5.00220 5.01585 5.19900 5.30475 5.34710 5.53031 6.04952 6.23186 6.58257 6.67020 6.89068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.333 6.333 3 C 0.136 3.864 4 C 0.021 3.979 5 O -0.183 6.183 6 C -0.037 4.037 7 C 0.606 3.394 8 O -0.539 6.539 9 N -0.707 5.707 10 C 0.110 3.890 11 C 0.075 3.925 12 F -0.201 7.201 13 C -0.144 4.144 14 C -0.114 4.114 15 H 0.084 0.916 16 C 0.084 3.916 17 O -0.600 6.600 18 C -0.130 4.130 19 C -0.106 4.106 20 C -0.098 4.098 21 C -0.063 4.063 22 C -0.092 4.092 23 O -0.557 6.557 24 Si 0.779 3.221 25 C -0.090 4.090 26 C -0.165 4.165 27 H 0.116 0.884 28 H 0.072 0.928 29 H 0.079 0.921 30 H 0.415 0.585 31 H 0.110 0.890 32 H 0.086 0.914 33 H 0.072 0.928 34 H 0.119 0.881 35 H 0.067 0.933 36 H 0.060 0.940 37 H 0.397 0.603 38 H 0.131 0.869 39 H 0.089 0.911 40 H 0.179 0.821 41 H 0.087 0.913 42 H 0.395 0.605 43 H -0.281 1.281 44 H -0.286 1.286 45 H 0.162 0.838 46 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.665 0.526 -4.842 5.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.090 3.910 4 C -0.027 4.027 5 O -0.086 6.086 6 C -0.087 4.087 7 C 0.392 3.608 8 O -0.418 6.418 9 N -0.358 5.358 10 C -0.013 4.013 11 C 0.056 3.944 12 F -0.181 7.181 13 C -0.181 4.181 14 C -0.132 4.132 15 H 0.102 0.898 16 C 0.007 3.993 17 O -0.409 6.409 18 C -0.168 4.168 19 C -0.126 4.126 20 C -0.099 4.099 21 C -0.064 4.064 22 C -0.200 4.200 23 O -0.368 6.368 24 Si 0.682 3.318 25 C -0.107 4.107 26 C -0.183 4.183 27 H 0.134 0.866 28 H 0.091 0.909 29 H 0.097 0.903 30 H 0.251 0.749 31 H 0.128 0.872 32 H 0.104 0.896 33 H 0.091 0.909 34 H 0.138 0.862 35 H 0.085 0.915 36 H 0.079 0.921 37 H 0.247 0.753 38 H 0.149 0.851 39 H 0.108 0.892 40 H 0.196 0.804 41 H 0.105 0.895 42 H 0.245 0.755 43 H -0.208 1.208 44 H -0.213 1.213 45 H 0.179 0.821 46 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -2.043 0.688 -4.072 4.607 hybrid contribution 0.744 -0.100 0.858 1.140 sum -1.299 0.588 -3.214 3.516 Atomic orbital electron populations 1.23495 0.75294 1.06032 1.03202 1.86153 1.24366 1.25764 1.88458 1.17978 0.86158 0.86825 1.00035 1.19210 0.88269 0.87125 1.08142 1.84025 1.12845 1.35146 1.76548 1.21933 0.83986 0.92816 1.09997 1.16569 0.85146 0.82311 0.76778 1.90890 1.31082 1.68040 1.51766 1.45750 1.11360 1.05313 1.73348 1.22096 0.85384 0.88412 1.05373 1.22239 0.88747 0.92983 0.90412 1.92852 1.62765 1.92514 1.69974 1.23768 1.02491 0.96902 0.94964 1.22477 0.97882 0.96371 0.96473 0.89805 1.22229 0.93857 0.91700 0.91560 1.86445 1.43763 1.60507 1.50139 1.23574 0.96511 0.95687 1.00982 1.22860 0.95190 0.94316 1.00256 1.19601 0.92612 0.92669 1.05034 1.18666 0.93069 0.92285 1.02379 1.25154 1.06225 1.00619 0.87973 1.86574 1.77301 1.42538 1.30348 0.93947 0.76579 0.73758 0.87528 1.20844 0.93035 0.98782 0.98071 1.21352 1.01851 0.89456 1.05641 0.86618 0.90950 0.90259 0.74884 0.87194 0.89573 0.90890 0.86231 0.91506 0.92142 0.75261 0.85073 0.89187 0.80375 0.89453 0.75473 1.20849 1.21294 0.82111 0.80166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.33 -1.69 10.50 -93.25 -0.98 -2.67 16 3 C 0.14 0.79 6.70 22.57 0.15 0.94 16 4 C 0.02 0.20 7.35 23.14 0.17 0.37 16 5 O -0.18 -2.01 10.28 -13.50 -0.14 -2.15 16 6 C -0.04 -0.36 7.07 24.00 0.17 -0.19 16 7 C 0.61 5.45 7.80 86.54 0.67 6.12 16 8 O -0.54 -7.20 16.83 -4.21 -0.07 -7.27 16 9 N -0.71 -2.96 5.45 -466.79 -2.54 -5.50 16 10 C 0.11 -0.01 5.42 86.38 0.47 0.46 16 11 C 0.07 -0.06 1.74 -10.27 -0.02 -0.08 16 12 F -0.20 -1.08 16.58 44.97 0.75 -0.34 16 13 C -0.14 0.26 7.08 31.12 0.22 0.48 16 14 C -0.11 0.18 3.98 -10.27 -0.04 0.13 16 15 H 0.08 0.23 8.14 -2.39 -0.02 0.21 16 16 C 0.08 -0.31 6.89 71.98 0.50 0.19 16 17 O -0.60 -0.29 13.66 -148.98 -2.03 -2.33 16 18 C -0.13 0.60 7.10 31.12 0.22 0.82 16 19 C -0.11 -0.93 10.68 23.79 0.25 -0.68 16 20 C -0.10 -0.83 6.16 -20.24 -0.12 -0.96 16 21 C -0.06 -0.28 5.30 -19.87 -0.11 -0.38 16 22 C -0.09 -0.06 2.70 71.24 0.19 0.13 16 23 O -0.56 -2.05 12.86 -148.98 -1.92 -3.97 16 24 Si 0.78 -2.63 30.20 68.60 2.07 -0.55 16 25 C -0.09 -0.04 8.62 22.02 0.19 0.15 16 26 C -0.16 0.02 9.03 22.40 0.20 0.22 16 27 H 0.12 -0.83 8.14 -2.39 -0.02 -0.85 16 28 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 29 H 0.08 -0.67 7.66 -2.39 -0.02 -0.69 16 30 H 0.41 1.48 7.74 -92.71 -0.72 0.76 16 31 H 0.11 -0.32 7.84 -2.39 -0.02 -0.34 16 32 H 0.09 0.03 8.14 -2.39 -0.02 0.02 16 33 H 0.07 0.08 8.14 -2.38 -0.02 0.06 16 34 H 0.12 -0.63 7.65 -2.39 -0.02 -0.64 16 35 H 0.07 -0.47 7.85 -2.39 -0.02 -0.49 16 36 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 37 H 0.40 -3.20 9.12 -74.06 -0.68 -3.87 16 38 H 0.13 -1.24 8.06 -2.39 -0.02 -1.26 16 39 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 40 H 0.18 1.13 8.06 -2.91 -0.02 1.11 16 41 H 0.09 -0.18 7.96 -2.38 -0.02 -0.20 16 42 H 0.39 -1.81 8.74 -74.06 -0.65 -2.46 16 43 H -0.28 -0.40 6.75 99.48 0.67 0.28 16 44 H -0.29 -0.30 7.11 99.48 0.71 0.41 16 45 H 0.16 -0.69 4.85 -2.91 -0.01 -0.70 16 46 H 0.18 -1.35 6.26 -2.91 -0.02 -1.37 16 Total: 0.00 -25.74 391.94 -1.60 -27.34 By element: Atomic # 1 Polarization: -10.38 SS G_CDS: -0.96 Total: -11.34 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 4.23 Total: 8.77 kcal Atomic # 7 Polarization: -2.96 SS G_CDS: -2.54 Total: -5.50 kcal Atomic # 8 Polarization: -13.24 SS G_CDS: -5.14 Total: -18.38 kcal Atomic # 9 Polarization: -1.08 SS G_CDS: 0.75 Total: -0.34 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: 2.07 Total: -0.55 kcal Total: -25.74 -1.60 -27.34 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.623 kcal (2) G-P(sol) polarization free energy of solvation -25.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds