Wall clock time and date at job start Sun Mar 7 2021 09:00:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33813 * 122.44887 * 2 1 4 4 C 1.50691 * 124.52583 * 359.97438 * 3 2 1 5 5 O 1.42904 * 109.47176 * 45.12884 * 4 3 2 6 6 Si 1.86301 * 109.47679 * 165.13033 * 4 3 2 7 7 S 1.70624 * 110.95092 * 179.97438 * 3 2 1 8 8 C 1.75825 * 91.56357 * 359.97438 * 7 3 2 9 9 C 1.46583 * 125.45480 * 180.02562 * 8 7 3 10 10 O 1.21701 * 119.99711 * 180.02562 * 9 8 7 11 11 N 1.34777 * 120.00222 * 0.02562 * 9 8 7 12 12 C 1.46500 * 119.99959 * 180.02562 * 11 9 8 13 13 C 1.53000 * 109.46992 * 180.02562 * 12 11 9 14 14 F 1.39901 * 112.85095 * 314.66851 * 13 12 11 15 15 C 1.53779 * 113.61351 * 85.86646 * 13 12 11 16 16 C 1.54046 * 86.98760 * 140.02036 * 15 13 12 17 17 H 1.08997 * 113.69251 * 89.12633 * 16 15 13 18 18 C 1.53005 * 113.61725 * 220.02437 * 16 15 13 19 19 O 1.42900 * 109.46870 * 272.48922 * 18 16 15 20 20 C 1.53782 * 113.61237 * 183.47178 * 13 12 11 21 21 C 1.36648 * 109.08815 * 0.26084 * 8 7 3 22 22 H 1.09005 * 109.46603 * 84.25599 * 1 2 3 23 23 H 1.08995 * 109.47162 * 204.25616 * 1 2 3 24 24 H 1.08994 * 109.47182 * 324.26157 * 1 2 3 25 25 H 1.09002 * 109.47436 * 285.13366 * 4 3 2 26 26 H 0.96698 * 113.99946 * 179.97438 * 5 4 3 27 27 H 1.48500 * 109.99866 * 300.00488 * 6 4 3 28 28 H 1.48508 * 109.99586 * 61.31635 * 6 4 3 29 29 H 0.96997 * 119.99793 * 0.02562 * 11 9 8 30 30 H 1.09000 * 109.47022 * 60.00355 * 12 11 9 31 31 H 1.08997 * 109.47268 * 300.00522 * 12 11 9 32 32 H 1.09007 * 113.61462 * 254.61521 * 15 13 12 33 33 H 1.09001 * 113.61458 * 25.51138 * 15 13 12 34 34 H 1.08994 * 109.47641 * 32.49139 * 18 16 15 35 35 H 1.09004 * 109.46940 * 152.49385 * 18 16 15 36 36 H 0.96698 * 114.00297 * 180.02562 * 19 18 16 37 37 H 1.08998 * 113.61909 * 334.48393 * 20 13 12 38 38 H 1.09000 * 113.61243 * 105.30396 * 20 13 12 39 39 H 1.07991 * 123.35818 * 179.73657 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 0.5741 2.5829 0.9539 6 14 2.9548 3.7518 0.4504 7 16 3.8970 0.7891 0.0007 8 6 3.5937 -0.9428 0.0018 9 6 4.6231 -1.9863 0.0033 10 8 4.3001 -3.1597 0.0035 11 7 5.9273 -1.6464 0.0046 12 6 6.9561 -2.6893 0.0055 13 6 8.3412 -2.0394 0.0075 14 9 8.4492 -0.9878 -0.9090 15 6 8.8539 -1.6862 1.4136 16 6 10.2385 -2.1691 0.9415 17 1 10.8424 -1.3862 0.4828 18 6 11.0034 -2.9663 2.0000 19 8 11.7501 -2.0692 2.8245 20 6 9.4964 -3.0510 -0.0767 21 6 2.2446 -1.1602 -0.0043 22 1 -0.3633 0.1029 -1.0226 23 1 -0.3633 -0.9369 0.4222 24 1 -0.3633 0.8341 0.6002 25 1 1.2469 2.7453 -0.9928 26 1 0.1477 3.4491 1.0079 27 1 3.4929 3.4502 1.8012 28 1 4.0497 3.7146 -0.5523 29 1 6.1847 -0.7112 0.0048 30 1 6.8463 -3.3088 -0.8846 31 1 6.8446 -3.3089 0.8953 32 1 8.8148 -0.6201 1.6376 33 1 8.4226 -2.3017 2.2030 34 1 10.2974 -3.5234 2.6158 35 1 11.6849 -3.6613 1.5093 36 1 12.2611 -2.5065 3.5192 37 1 9.2405 -4.0390 0.3060 38 1 9.9747 -3.0870 -1.0555 39 1 1.8019 -2.1452 -0.0091 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_6739946.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:20 Heat of formation + Delta-G solvation = -106.403867 kcal Electronic energy + Delta-G solvation = -23948.947901 eV Core-core repulsion = 20093.157531 eV Total energy + Delta-G solvation = -3855.790370 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.098 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -48.90866 -40.88925 -40.00056 -39.54391 -37.51319 -37.25837 -35.62529 -32.47403 -30.45007 -30.15442 -27.74829 -27.18921 -25.88075 -24.19493 -22.34167 -21.81376 -20.82560 -20.06342 -19.19925 -18.61776 -18.39383 -17.78031 -17.19987 -16.98694 -16.70295 -16.42171 -16.15001 -15.91042 -15.86739 -15.28269 -15.05643 -14.84962 -14.77218 -14.48087 -14.35906 -14.22910 -13.85985 -13.59784 -13.32711 -13.15803 -13.01172 -12.92177 -12.52127 -12.48377 -12.12190 -12.06069 -11.99812 -11.62582 -11.46259 -11.13124 -10.96783 -10.58755 -10.30354 -9.71801 -9.42278 -5.34875 -0.62297 0.31777 0.66597 1.03600 1.31184 1.47922 1.80254 1.89280 2.16275 2.86830 2.96525 3.03191 3.16826 3.19693 3.38293 3.62757 3.63731 3.74074 4.10892 4.13991 4.19104 4.26562 4.30825 4.38431 4.39328 4.40696 4.48007 4.52037 4.60526 4.69154 4.77525 4.81737 4.83147 4.88265 5.06807 5.13715 5.25545 5.40650 5.51464 6.25968 6.44430 6.57795 7.03002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.082 4.082 3 C -0.194 4.194 4 C -0.032 4.032 5 O -0.537 6.537 6 Si 0.667 3.333 7 S 0.177 5.823 8 C -0.260 4.260 9 C 0.596 3.404 10 O -0.523 6.523 11 N -0.726 5.726 12 C 0.114 3.886 13 C 0.078 3.922 14 F -0.184 7.184 15 C -0.147 4.147 16 C -0.108 4.108 17 H 0.105 0.895 18 C 0.085 3.915 19 O -0.573 6.573 20 C -0.141 4.141 21 C -0.045 4.045 22 H 0.068 0.932 23 H 0.065 0.935 24 H 0.096 0.904 25 H 0.086 0.914 26 H 0.385 0.615 27 H -0.236 1.236 28 H -0.236 1.236 29 H 0.402 0.598 30 H 0.085 0.915 31 H 0.093 0.907 32 H 0.085 0.915 33 H 0.103 0.897 34 H 0.050 0.950 35 H 0.051 0.949 36 H 0.382 0.618 37 H 0.106 0.894 38 H 0.091 0.909 39 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.016 3.334 0.692 3.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.094 4.094 3 C -0.313 4.313 4 C -0.145 4.145 5 O -0.345 6.345 6 Si 0.566 3.434 7 S 0.445 5.555 8 C -0.380 4.380 9 C 0.382 3.618 10 O -0.401 6.401 11 N -0.378 5.378 12 C -0.010 4.010 13 C 0.059 3.941 14 F -0.164 7.164 15 C -0.185 4.185 16 C -0.126 4.126 17 H 0.124 0.876 18 C 0.008 3.992 19 O -0.379 6.379 20 C -0.179 4.179 21 C -0.078 4.078 22 H 0.086 0.914 23 H 0.084 0.916 24 H 0.115 0.885 25 H 0.104 0.896 26 H 0.233 0.767 27 H -0.159 1.159 28 H -0.160 1.160 29 H 0.237 0.763 30 H 0.103 0.897 31 H 0.111 0.889 32 H 0.104 0.896 33 H 0.121 0.879 34 H 0.068 0.932 35 H 0.069 0.931 36 H 0.230 0.770 37 H 0.125 0.875 38 H 0.109 0.891 39 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.895 3.346 0.575 3.888 hybrid contribution -1.059 -1.169 -0.025 1.577 sum 0.837 2.177 0.551 2.396 Atomic orbital electron populations 1.20744 0.88564 1.04144 1.02853 1.18730 0.98596 0.90319 1.01790 1.23140 0.97735 0.98691 1.11726 1.23969 0.97938 0.96707 0.95897 1.86457 1.49932 1.37878 1.60184 0.94809 0.78848 0.87154 0.82576 1.83002 1.03506 0.99470 1.69568 1.24565 0.97963 0.96540 1.18886 1.16893 0.81349 0.87443 0.76111 1.90860 1.81546 1.18025 1.49666 1.45683 1.05336 1.10449 1.76382 1.21862 0.84019 0.90492 1.04577 1.22104 0.95037 0.87070 0.89849 1.92879 1.96975 1.58551 1.67988 1.23787 0.95774 1.03944 0.94974 1.22555 0.95217 0.99033 0.95807 0.87640 1.22139 0.94069 0.91316 0.91708 1.86488 1.65602 1.37181 1.48616 1.23548 0.94621 0.98406 1.01310 1.20759 0.90794 1.00166 0.96116 0.91372 0.91611 0.88545 0.89639 0.76656 1.15946 1.15958 0.76308 0.89652 0.88884 0.89633 0.87858 0.93190 0.93090 0.77045 0.87512 0.89061 0.82446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.09 9.74 36.01 0.35 0.27 16 2 C -0.08 -0.21 5.75 -106.45 -0.61 -0.82 16 3 C -0.19 -0.40 5.65 -35.87 -0.20 -0.60 16 4 C -0.03 0.03 2.69 36.00 0.10 0.12 16 5 O -0.54 0.72 10.17 -35.23 -0.36 0.36 16 6 Si 0.67 -1.09 30.98 -169.99 -5.27 -6.36 16 7 S 0.18 0.37 19.36 -107.50 -2.08 -1.71 16 8 C -0.26 -0.93 6.45 -36.79 -0.24 -1.16 16 9 C 0.60 2.60 7.78 -12.90 -0.10 2.50 16 10 O -0.52 -3.80 16.84 5.19 0.09 -3.71 16 11 N -0.73 -1.39 5.45 -61.65 -0.34 -1.73 16 12 C 0.11 0.05 5.41 -4.04 -0.02 0.02 16 13 C 0.08 -0.03 1.71 -89.81 -0.15 -0.18 16 14 F -0.18 -0.36 16.64 2.25 0.04 -0.32 16 15 C -0.15 0.12 7.09 -25.78 -0.18 -0.06 16 16 C -0.11 0.09 3.99 -89.66 -0.36 -0.27 16 17 H 0.11 0.06 8.14 -51.93 -0.42 -0.36 16 18 C 0.09 -0.12 6.89 37.16 0.26 0.14 16 19 O -0.57 -0.17 13.66 -35.23 -0.48 -0.65 16 20 C -0.14 0.27 7.10 -25.91 -0.18 0.08 16 21 C -0.04 -0.15 9.78 -40.43 -0.40 -0.54 16 22 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 23 H 0.06 0.02 8.10 -51.93 -0.42 -0.40 16 24 H 0.10 0.08 5.48 -51.93 -0.28 -0.20 16 25 H 0.09 -0.22 7.96 -51.93 -0.41 -0.63 16 26 H 0.38 -2.44 8.74 45.56 0.40 -2.04 16 27 H -0.24 -0.38 7.11 56.52 0.40 0.02 16 28 H -0.24 -0.09 7.11 56.52 0.40 0.31 16 29 H 0.40 0.36 7.19 -40.82 -0.29 0.07 16 30 H 0.09 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.09 -0.03 7.87 -51.93 -0.41 -0.44 16 32 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.10 -0.19 7.68 -51.93 -0.40 -0.59 16 34 H 0.05 -0.13 7.85 -51.93 -0.41 -0.53 16 35 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.38 -1.48 9.12 45.56 0.42 -1.06 16 37 H 0.11 -0.38 8.06 -51.93 -0.42 -0.80 16 38 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.16 0.42 8.06 -52.49 -0.42 0.00 16 LS Contribution 342.30 15.07 5.16 5.16 Total: 0.00 -9.11 342.30 -9.37 -18.48 By element: Atomic # 1 Polarization: -4.61 SS G_CDS: -4.39 Total: -8.99 kcal Atomic # 6 Polarization: 1.23 SS G_CDS: -1.74 Total: -0.52 kcal Atomic # 7 Polarization: -1.39 SS G_CDS: -0.34 Total: -1.73 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.75 Total: -4.00 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.27 Total: -6.36 kcal Atomic # 16 Polarization: 0.37 SS G_CDS: -2.08 Total: -1.71 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -9.11 -9.37 -18.48 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6739946.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.923 kcal (2) G-P(sol) polarization free energy of solvation -9.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.373 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.480 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds