Wall clock time and date at job start Sun Mar 7 2021 09:00:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.46949 * 2 1 4 4 C 1.50695 * 109.47631 * 120.00489 * 2 1 3 5 5 C 1.32768 * 124.71473 * 64.99509 * 4 2 1 6 6 C 1.44423 * 113.08527 * 179.72500 * 5 4 2 7 7 C 1.47190 * 123.46588 * 180.32024 * 6 5 4 8 8 O 1.21640 * 119.99504 * 0.19049 * 7 6 5 9 9 N 1.34777 * 120.00433 * 180.19549 * 7 6 5 10 10 C 1.46492 * 120.00003 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.47142 * 179.97438 * 10 9 7 12 12 F 1.39897 * 112.85079 * 314.66813 * 11 10 9 13 13 C 1.53780 * 113.61333 * 85.86347 * 11 10 9 14 14 C 1.53961 * 87.01988 * 139.95510 * 13 11 10 15 15 H 1.09001 * 113.61313 * 89.20040 * 14 13 11 16 16 C 1.53001 * 113.66336 * 220.06867 * 14 13 11 17 17 O 1.42904 * 109.46933 * 272.55488 * 16 14 13 18 18 C 1.53779 * 113.61674 * 183.47265 * 11 10 9 19 19 C 1.36010 * 113.07813 * 0.47577 * 6 5 4 20 20 S 1.70454 * 110.81487 * 359.54023 * 19 6 5 21 21 H 0.96696 * 114.00976 * 60.00017 * 1 2 3 22 22 H 1.09000 * 109.46788 * 240.00485 * 2 1 3 23 23 H 1.48496 * 109.99897 * 60.00566 * 3 2 1 24 24 H 1.48500 * 110.00125 * 181.32495 * 3 2 1 25 25 H 1.07999 * 123.45731 * 359.97438 * 5 4 2 26 26 H 0.97000 * 119.99507 * 359.97438 * 9 7 6 27 27 H 1.08999 * 109.47261 * 299.99927 * 10 9 7 28 28 H 1.09001 * 109.47481 * 59.99987 * 10 9 7 29 29 H 1.09000 * 113.61707 * 254.52917 * 13 11 10 30 30 H 1.08997 * 113.61887 * 25.43119 * 13 11 10 31 31 H 1.08995 * 109.47341 * 32.55285 * 16 14 13 32 32 H 1.08996 * 109.46744 * 152.56026 * 16 14 13 33 33 H 0.96706 * 113.99813 * 180.02562 * 17 16 14 34 34 H 1.09001 * 113.61182 * 334.56655 * 18 11 10 35 35 H 1.08999 * 113.61992 * 105.47209 * 18 11 10 36 36 H 1.08002 * 124.59604 * 179.81346 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.7486 -2.0004 1.4862 6 6 2.3417 -2.4196 2.7345 7 6 2.2822 -3.8016 3.2377 8 8 1.7138 -4.6605 2.5905 9 7 2.8573 -4.1154 4.4155 10 6 2.7975 -5.4907 4.9165 11 6 3.5220 -5.5755 6.2614 12 9 4.7543 -4.9133 6.2574 13 6 2.6332 -5.2156 7.4636 14 6 3.3162 -6.3741 8.2130 15 1 4.2199 -6.0772 8.7454 16 6 2.3585 -7.1943 9.0796 17 8 2.2576 -6.5973 10.3741 18 6 3.5904 -7.0004 6.8355 19 6 2.9581 -1.4056 3.3991 20 16 2.8400 0.0523 2.5238 21 1 -0.3935 0.4416 -0.7650 22 1 1.7923 -0.5138 -0.8900 23 1 1.5615 2.4678 1.2085 24 1 3.5345 1.7704 -0.0323 25 1 1.2149 -2.6684 0.8266 26 1 3.3108 -3.4305 4.9314 27 1 1.7561 -5.7855 5.0452 28 1 3.2787 -6.1588 4.2023 29 1 2.8475 -4.2342 7.8868 30 1 1.5703 -5.3775 7.2849 31 1 1.3741 -7.2165 8.6121 32 1 2.7376 -8.2115 9.1772 33 1 1.6656 -7.0660 10.9783 34 1 2.7895 -7.6514 6.4847 35 1 4.5762 -7.4580 6.7524 36 1 3.4588 -1.5108 4.3503 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_6894386.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:22 Heat of formation + Delta-G solvation = -103.968848 kcal Electronic energy + Delta-G solvation = -21902.115898 eV Core-core repulsion = 18201.968737 eV Total energy + Delta-G solvation = -3700.147160 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.082 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.90758 -40.95049 -39.93150 -38.67472 -37.33271 -37.11879 -35.61598 -32.20785 -30.24100 -27.55968 -27.16835 -26.94621 -25.10366 -22.35363 -21.89520 -20.89234 -20.36999 -18.92709 -18.49046 -18.39173 -18.11747 -17.35557 -16.96980 -16.61941 -16.45873 -16.18330 -15.97190 -15.72722 -15.41601 -15.02356 -14.69716 -14.42424 -14.28173 -13.98776 -13.86413 -13.73885 -13.66136 -13.47884 -13.29762 -12.67176 -12.48594 -12.31210 -12.06773 -12.01039 -11.61319 -11.45165 -11.00115 -10.91048 -10.49292 -10.23785 -9.98334 -9.51887 -5.31024 -0.37684 0.35861 0.71026 0.89551 1.12854 1.51559 1.82317 1.97402 2.34551 2.87571 2.97668 3.04274 3.20802 3.26681 3.39438 3.62165 3.65449 3.84178 3.96946 4.12599 4.19863 4.25166 4.31788 4.33316 4.39939 4.41640 4.51344 4.53214 4.69962 4.70566 4.78353 4.82969 5.01782 5.16969 5.22203 5.29874 6.36165 6.51478 6.57741 7.14939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.034 4.034 3 Si 0.670 3.330 4 C -0.198 4.198 5 C -0.048 4.048 6 C -0.155 4.155 7 C 0.582 3.418 8 O -0.530 6.530 9 N -0.725 5.725 10 C 0.114 3.886 11 C 0.079 3.921 12 F -0.184 7.184 13 C -0.146 4.146 14 C -0.108 4.108 15 H 0.105 0.895 16 C 0.085 3.915 17 O -0.573 6.573 18 C -0.141 4.141 19 C -0.201 4.201 20 S 0.178 5.822 21 H 0.385 0.615 22 H 0.085 0.915 23 H -0.234 1.234 24 H -0.239 1.239 25 H 0.159 0.841 26 H 0.403 0.597 27 H 0.092 0.908 28 H 0.083 0.917 29 H 0.084 0.916 30 H 0.103 0.897 31 H 0.050 0.950 32 H 0.051 0.949 33 H 0.382 0.618 34 H 0.106 0.894 35 H 0.090 0.910 36 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.570 1.332 -0.575 1.558 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.147 4.147 3 Si 0.569 3.431 4 C -0.314 4.314 5 C -0.077 4.077 6 C -0.174 4.174 7 C 0.368 3.632 8 O -0.408 6.408 9 N -0.377 5.377 10 C -0.010 4.010 11 C 0.061 3.939 12 F -0.165 7.165 13 C -0.184 4.184 14 C -0.127 4.127 15 H 0.123 0.877 16 C 0.008 3.992 17 O -0.379 6.379 18 C -0.180 4.180 19 C -0.339 4.339 20 S 0.444 5.556 21 H 0.233 0.767 22 H 0.103 0.897 23 H -0.157 1.157 24 H -0.162 1.162 25 H 0.176 0.824 26 H 0.238 0.762 27 H 0.110 0.890 28 H 0.102 0.898 29 H 0.103 0.897 30 H 0.121 0.879 31 H 0.068 0.932 32 H 0.069 0.931 33 H 0.230 0.770 34 H 0.125 0.875 35 H 0.109 0.891 36 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges 0.572 2.903 -0.061 2.959 hybrid contribution -0.440 -2.079 0.500 2.183 sum 0.132 0.824 0.440 0.943 Atomic orbital electron populations 1.86521 1.16759 1.81849 1.49802 1.23994 0.85937 1.09680 0.95129 0.94723 0.81904 0.78106 0.88340 1.23425 1.09225 0.97307 1.01477 1.21025 0.97314 0.94357 0.95034 1.20181 1.05848 0.93826 0.97518 1.17548 0.78169 0.87114 0.80401 1.90826 1.43184 1.49587 1.57154 1.45652 1.58287 1.11419 1.22375 1.21825 1.01623 0.84057 0.93458 1.22091 0.81595 0.94885 0.95359 1.92873 1.44229 1.81897 1.97468 1.23759 0.99841 1.00640 0.94150 1.22542 0.99833 0.96138 0.94153 0.87692 1.22139 0.97941 0.95482 0.83682 1.86489 1.70615 1.56632 1.24175 1.23552 1.04781 0.94901 0.94726 1.25831 1.04857 0.98314 1.04904 1.83191 1.50955 1.10006 1.11404 0.76689 0.89714 1.15699 1.16223 0.82375 0.76182 0.89035 0.89841 0.89680 0.87890 0.93182 0.93103 0.77041 0.87528 0.89110 0.81025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.07 12.86 -35.23 -0.45 -0.52 16 2 C -0.03 0.01 2.93 36.00 0.11 0.11 16 3 Si 0.67 -1.03 30.92 -169.99 -5.26 -6.29 16 4 C -0.20 -0.45 5.69 -36.18 -0.21 -0.65 16 5 C -0.05 -0.16 9.95 -39.02 -0.39 -0.55 16 6 C -0.16 -0.46 5.98 -104.63 -0.63 -1.08 16 7 C 0.58 2.24 7.79 -12.62 -0.10 2.14 16 8 O -0.53 -3.83 16.80 5.24 0.09 -3.74 16 9 N -0.72 -0.74 5.42 -61.46 -0.33 -1.07 16 10 C 0.11 0.00 5.40 -4.05 -0.02 -0.02 16 11 C 0.08 -0.06 1.71 -89.81 -0.15 -0.22 16 12 F -0.18 -0.26 16.65 2.25 0.04 -0.22 16 13 C -0.15 0.17 7.09 -25.82 -0.18 -0.01 16 14 C -0.11 0.10 3.99 -89.71 -0.36 -0.25 16 15 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 16 C 0.09 -0.13 6.89 37.16 0.26 0.13 16 17 O -0.57 -0.13 13.66 -35.23 -0.48 -0.61 16 18 C -0.14 0.29 7.10 -25.92 -0.18 0.10 16 19 C -0.20 -0.17 10.38 29.93 0.31 0.14 16 20 S 0.18 0.24 20.20 -107.50 -2.17 -1.94 16 21 H 0.38 -1.97 8.74 45.56 0.40 -1.57 16 22 H 0.09 -0.16 7.96 -51.93 -0.41 -0.58 16 23 H -0.23 -0.29 7.11 56.52 0.40 0.12 16 24 H -0.24 -0.13 7.11 56.52 0.40 0.27 16 25 H 0.16 0.56 8.06 -52.49 -0.42 0.14 16 26 H 0.40 -0.28 6.57 -40.82 -0.27 -0.55 16 27 H 0.09 -0.04 7.88 -51.93 -0.41 -0.45 16 28 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.10 -0.21 7.68 -51.93 -0.40 -0.61 16 31 H 0.05 -0.13 7.85 -51.93 -0.41 -0.54 16 32 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.38 -1.50 9.12 45.56 0.42 -1.08 16 34 H 0.11 -0.38 8.06 -51.93 -0.42 -0.80 16 35 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.17 -0.35 7.01 -52.49 -0.37 -0.71 16 LS Contribution 325.26 15.07 4.90 4.90 Total: 0.00 -9.56 325.26 -8.82 -18.38 By element: Atomic # 1 Polarization: -5.13 SS G_CDS: -3.60 Total: -8.73 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -1.55 Total: -0.15 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -0.33 Total: -1.07 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.85 Total: -4.88 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.26 Total: -6.29 kcal Atomic # 16 Polarization: 0.24 SS G_CDS: -2.17 Total: -1.94 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -9.56 -8.82 -18.38 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6894386.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.588 kcal (2) G-P(sol) polarization free energy of solvation -9.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.381 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds