Wall clock time and date at job start Sun Mar 7 2021 09:00:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.46949 * 2 1 4 4 C 1.50695 * 109.47631 * 120.00489 * 2 1 3 5 5 C 1.32768 * 124.71473 * 64.99509 * 4 2 1 6 6 C 1.44423 * 113.08527 * 179.72500 * 5 4 2 7 7 C 1.47190 * 123.46588 * 180.32024 * 6 5 4 8 8 O 1.21640 * 119.99504 * 0.19049 * 7 6 5 9 9 N 1.34777 * 120.00433 * 180.19549 * 7 6 5 10 10 C 1.46492 * 120.00003 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.47142 * 179.97438 * 10 9 7 12 12 F 1.39897 * 112.85079 * 314.66813 * 11 10 9 13 13 C 1.53780 * 113.61333 * 85.86347 * 11 10 9 14 14 C 1.53961 * 87.01988 * 139.95510 * 13 11 10 15 15 H 1.09001 * 113.61313 * 89.20040 * 14 13 11 16 16 C 1.53001 * 113.66336 * 220.06867 * 14 13 11 17 17 O 1.42904 * 109.46933 * 272.55488 * 16 14 13 18 18 C 1.53779 * 113.61674 * 183.47265 * 11 10 9 19 19 C 1.36010 * 113.07813 * 0.47577 * 6 5 4 20 20 S 1.70454 * 110.81487 * 359.54023 * 19 6 5 21 21 H 0.96696 * 114.00976 * 60.00017 * 1 2 3 22 22 H 1.09000 * 109.46788 * 240.00485 * 2 1 3 23 23 H 1.48496 * 109.99897 * 60.00566 * 3 2 1 24 24 H 1.48500 * 110.00125 * 181.32495 * 3 2 1 25 25 H 1.07999 * 123.45731 * 359.97438 * 5 4 2 26 26 H 0.97000 * 119.99507 * 359.97438 * 9 7 6 27 27 H 1.08999 * 109.47261 * 299.99927 * 10 9 7 28 28 H 1.09001 * 109.47481 * 59.99987 * 10 9 7 29 29 H 1.09000 * 113.61707 * 254.52917 * 13 11 10 30 30 H 1.08997 * 113.61887 * 25.43119 * 13 11 10 31 31 H 1.08995 * 109.47341 * 32.55285 * 16 14 13 32 32 H 1.08996 * 109.46744 * 152.56026 * 16 14 13 33 33 H 0.96706 * 113.99813 * 180.02562 * 17 16 14 34 34 H 1.09001 * 113.61182 * 334.56655 * 18 11 10 35 35 H 1.08999 * 113.61992 * 105.47209 * 18 11 10 36 36 H 1.08002 * 124.59604 * 179.81346 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.7486 -2.0004 1.4862 6 6 2.3417 -2.4196 2.7345 7 6 2.2822 -3.8016 3.2377 8 8 1.7138 -4.6605 2.5905 9 7 2.8573 -4.1154 4.4155 10 6 2.7975 -5.4907 4.9165 11 6 3.5220 -5.5755 6.2614 12 9 4.7543 -4.9133 6.2574 13 6 2.6332 -5.2156 7.4636 14 6 3.3162 -6.3741 8.2130 15 1 4.2199 -6.0772 8.7454 16 6 2.3585 -7.1943 9.0796 17 8 2.2576 -6.5973 10.3741 18 6 3.5904 -7.0004 6.8355 19 6 2.9581 -1.4056 3.3991 20 16 2.8400 0.0523 2.5238 21 1 -0.3935 0.4416 -0.7650 22 1 1.7923 -0.5138 -0.8900 23 1 1.5615 2.4678 1.2085 24 1 3.5345 1.7704 -0.0323 25 1 1.2149 -2.6684 0.8266 26 1 3.3108 -3.4305 4.9314 27 1 1.7561 -5.7855 5.0452 28 1 3.2787 -6.1588 4.2023 29 1 2.8475 -4.2342 7.8868 30 1 1.5703 -5.3775 7.2849 31 1 1.3741 -7.2165 8.6121 32 1 2.7376 -8.2115 9.1772 33 1 1.6656 -7.0660 10.9783 34 1 2.7895 -7.6514 6.4847 35 1 4.5762 -7.4580 6.7524 36 1 3.4588 -1.5108 4.3503 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_6894386.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:21 Heat of formation + Delta-G solvation = -107.552939 kcal Electronic energy + Delta-G solvation = -21902.271316 eV Core-core repulsion = 18201.968737 eV Total energy + Delta-G solvation = -3700.302578 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.082 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -48.94607 -41.16259 -39.86907 -38.74726 -37.29399 -37.15991 -35.78829 -32.29198 -30.24336 -27.53053 -27.05383 -27.02453 -25.18912 -22.32099 -22.04742 -20.85837 -20.47760 -18.99588 -18.46417 -18.34037 -18.23943 -17.36146 -17.00510 -16.66258 -16.47865 -16.23911 -16.07999 -15.78695 -15.41457 -14.98763 -14.78407 -14.48878 -14.29821 -14.04145 -13.96002 -13.81099 -13.69529 -13.43852 -13.24638 -12.69972 -12.46480 -12.39068 -12.11234 -11.92642 -11.57997 -11.39412 -11.18131 -10.84296 -10.49197 -10.39265 -10.07153 -9.65607 -5.20189 -0.50442 0.24782 0.58493 0.69997 1.18591 1.59664 1.85154 1.90019 2.11243 2.99006 3.06022 3.09424 3.28939 3.31935 3.48557 3.66968 3.75259 3.79152 3.92345 4.13328 4.20657 4.32050 4.40625 4.40818 4.50832 4.56315 4.57256 4.59413 4.67564 4.80208 4.84337 4.87860 4.93799 5.02886 5.13176 5.33543 6.22731 6.84334 6.86353 6.93923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.049 4.049 3 Si 0.760 3.240 4 C -0.209 4.209 5 C -0.068 4.068 6 C -0.178 4.178 7 C 0.581 3.419 8 O -0.573 6.573 9 N -0.713 5.713 10 C 0.113 3.887 11 C 0.079 3.921 12 F -0.198 7.198 13 C -0.143 4.143 14 C -0.112 4.112 15 H 0.086 0.914 16 C 0.083 3.917 17 O -0.599 6.599 18 C -0.133 4.133 19 C -0.186 4.186 20 S 0.186 5.814 21 H 0.406 0.594 22 H 0.102 0.898 23 H -0.271 1.271 24 H -0.265 1.265 25 H 0.147 0.853 26 H 0.412 0.588 27 H 0.099 0.901 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.115 0.885 31 H 0.064 0.936 32 H 0.060 0.940 33 H 0.397 0.603 34 H 0.127 0.873 35 H 0.090 0.910 36 H 0.200 0.800 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.636 1.615 -0.426 1.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.160 4.160 3 Si 0.661 3.339 4 C -0.325 4.325 5 C -0.097 4.097 6 C -0.196 4.196 7 C 0.367 3.633 8 O -0.454 6.454 9 N -0.365 5.365 10 C -0.010 4.010 11 C 0.060 3.940 12 F -0.179 7.179 13 C -0.180 4.180 14 C -0.131 4.131 15 H 0.105 0.895 16 C 0.006 3.994 17 O -0.408 6.408 18 C -0.171 4.171 19 C -0.324 4.324 20 S 0.451 5.549 21 H 0.258 0.742 22 H 0.120 0.880 23 H -0.197 1.197 24 H -0.190 1.190 25 H 0.165 0.835 26 H 0.249 0.751 27 H 0.117 0.883 28 H 0.096 0.904 29 H 0.096 0.904 30 H 0.133 0.867 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.247 0.753 34 H 0.145 0.855 35 H 0.109 0.891 36 H 0.217 0.783 Dipole moment (debyes) X Y Z Total from point charges 0.499 3.177 0.096 3.218 hybrid contribution -0.415 -2.128 0.495 2.224 sum 0.085 1.049 0.591 1.207 Atomic orbital electron populations 1.86467 1.16899 1.82532 1.51489 1.24295 0.86064 1.10919 0.94741 0.93643 0.78928 0.75223 0.86084 1.23813 1.08969 0.97258 1.02496 1.21061 0.98242 0.94866 0.95571 1.20175 1.07392 0.93930 0.98068 1.17724 0.77740 0.87127 0.80674 1.90793 1.45354 1.50732 1.58506 1.45609 1.57212 1.12190 1.21516 1.21918 1.02152 0.83326 0.93647 1.22171 0.80991 0.95843 0.94948 1.92844 1.45193 1.82320 1.97497 1.23776 1.00381 1.00250 0.93637 1.22511 0.99359 0.96587 0.94636 0.89537 1.22228 0.98514 0.95579 0.83102 1.86442 1.71408 1.57706 1.25206 1.23570 1.05562 0.94273 0.93648 1.26112 1.03435 0.97451 1.05426 1.83200 1.50508 1.10005 1.11152 0.74200 0.88029 1.19669 1.19036 0.83530 0.75138 0.88284 0.90440 0.90442 0.86696 0.91752 0.92191 0.75258 0.85526 0.89136 0.78320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.14 12.86 -148.98 -1.92 -2.06 16 2 C -0.05 0.02 2.93 71.23 0.21 0.23 16 3 Si 0.76 -2.60 30.92 68.60 2.12 -0.48 16 4 C -0.21 -1.08 5.69 24.51 0.14 -0.94 16 5 C -0.07 -0.56 9.95 22.67 0.23 -0.34 16 6 C -0.18 -1.22 5.98 -19.87 -0.12 -1.33 16 7 C 0.58 5.15 7.79 86.59 0.67 5.83 16 8 O -0.57 -9.36 16.80 -4.16 -0.07 -9.43 16 9 N -0.71 -1.74 5.42 -466.61 -2.53 -4.27 16 10 C 0.11 0.03 5.40 86.38 0.47 0.49 16 11 C 0.08 -0.13 1.71 -10.27 -0.02 -0.15 16 12 F -0.20 -0.61 16.65 44.97 0.75 0.13 16 13 C -0.14 0.37 7.09 31.18 0.22 0.59 16 14 C -0.11 0.23 3.99 -10.20 -0.04 0.19 16 15 H 0.09 0.15 8.14 -2.39 -0.02 0.13 16 16 C 0.08 -0.30 6.89 71.98 0.50 0.19 16 17 O -0.60 -0.15 13.66 -148.98 -2.04 -2.18 16 18 C -0.13 0.61 7.10 31.12 0.22 0.83 16 19 C -0.19 -0.30 10.38 67.30 0.70 0.40 16 20 S 0.19 0.50 20.20 -56.49 -1.14 -0.64 16 21 H 0.41 -4.39 8.74 -74.06 -0.65 -5.04 16 22 H 0.10 -0.42 7.96 -2.39 -0.02 -0.44 16 23 H -0.27 -0.73 7.11 99.48 0.71 -0.03 16 24 H -0.26 -0.22 7.11 99.48 0.71 0.48 16 25 H 0.15 1.41 8.06 -2.91 -0.02 1.39 16 26 H 0.41 -0.62 6.57 -92.71 -0.61 -1.23 16 27 H 0.10 -0.10 7.88 -2.39 -0.02 -0.12 16 28 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 29 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 30 H 0.11 -0.57 7.68 -2.39 -0.02 -0.59 16 31 H 0.06 -0.42 7.85 -2.39 -0.02 -0.44 16 32 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 33 H 0.40 -3.23 9.12 -74.05 -0.68 -3.91 16 34 H 0.13 -1.09 8.06 -2.39 -0.02 -1.11 16 35 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.20 -1.01 7.01 -2.91 -0.02 -1.03 16 Total: 0.00 -23.18 325.26 -2.40 -25.58 By element: Atomic # 1 Polarization: -11.89 SS G_CDS: -0.75 Total: -12.65 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: 3.17 Total: 6.00 kcal Atomic # 7 Polarization: -1.74 SS G_CDS: -2.53 Total: -4.27 kcal Atomic # 8 Polarization: -9.65 SS G_CDS: -4.02 Total: -13.67 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 0.75 Total: 0.13 kcal Atomic # 14 Polarization: -2.60 SS G_CDS: 2.12 Total: -0.48 kcal Atomic # 16 Polarization: 0.50 SS G_CDS: -1.14 Total: -0.64 kcal Total: -23.18 -2.40 -25.58 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_6894386.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.977 kcal (2) G-P(sol) polarization free energy of solvation -23.175 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.152 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds