Wall clock time and date at job start Sun Mar 7 2021 09:00:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37931 * 120.07395 * 2 1 4 4 C 1.38386 * 120.14667 * 180.02562 * 3 2 1 5 5 C 1.50700 * 119.85256 * 179.97438 * 4 3 2 6 6 C 1.38338 * 120.29272 * 359.95854 * 4 3 2 7 7 C 1.50693 * 119.92817 * 180.02562 * 6 4 3 8 8 O 1.42898 * 109.47255 * 285.00004 * 7 6 4 9 9 Si 1.86299 * 109.47199 * 164.99861 * 7 6 4 10 10 C 1.37975 * 120.14102 * 0.04122 * 6 4 3 11 11 C 1.39560 * 119.85772 * 359.97438 * 10 6 4 12 12 C 1.47846 * 120.14660 * 180.27601 * 11 10 6 13 13 O 1.21553 * 120.00046 * 173.72362 * 12 11 10 14 14 N 1.34781 * 120.00024 * 353.72593 * 12 11 10 15 15 C 1.46493 * 120.00143 * 180.02562 * 14 12 11 16 16 C 1.52997 * 109.47290 * 179.97438 * 15 14 12 17 17 F 1.39896 * 112.85114 * 48.80140 * 16 15 14 18 18 C 1.53782 * 113.61539 * 180.02562 * 16 15 14 19 19 C 1.53782 * 87.08071 * 139.98070 * 18 16 15 20 20 H 1.08999 * 113.61509 * 89.20011 * 19 18 16 21 21 C 1.53002 * 113.61027 * 220.01687 * 19 18 16 22 22 O 1.42909 * 109.46908 * 185.00093 * 21 19 18 23 23 C 1.53777 * 113.61361 * 277.49844 * 16 15 14 24 24 H 1.09002 * 109.46934 * 263.44589 * 1 2 3 25 25 H 1.08995 * 109.47100 * 23.44969 * 1 2 3 26 26 H 1.08995 * 109.47042 * 143.45191 * 1 2 3 27 27 H 1.08007 * 119.92601 * 0.02666 * 3 2 1 28 28 H 1.09001 * 109.46953 * 90.00646 * 5 4 3 29 29 H 1.09005 * 109.47048 * 209.99862 * 5 4 3 30 30 H 1.09001 * 109.47668 * 330.00430 * 5 4 3 31 31 H 1.09003 * 109.47338 * 45.00236 * 7 6 4 32 32 H 0.96700 * 113.99971 * 180.02562 * 8 7 6 33 33 H 1.48505 * 110.00132 * 298.68503 * 9 7 6 34 34 H 1.48504 * 109.99733 * 59.99925 * 9 7 6 35 35 H 1.08006 * 120.07155 * 180.02562 * 10 6 4 36 36 H 0.97005 * 119.99820 * 359.97438 * 14 12 11 37 37 H 1.08998 * 109.47035 * 299.99921 * 15 14 12 38 38 H 1.09000 * 109.47238 * 59.99794 * 15 14 12 39 39 H 1.09005 * 113.61307 * 254.52711 * 18 16 15 40 40 H 1.08995 * 113.61333 * 25.43233 * 18 16 15 41 41 H 1.08998 * 109.47262 * 304.99992 * 21 19 18 42 42 H 1.08996 * 109.47111 * 65.00483 * 21 19 18 43 43 H 0.96696 * 113.99906 * 179.97438 * 22 21 19 44 44 H 1.08998 * 113.61629 * 334.56077 * 23 16 15 45 45 H 1.08997 * 113.62016 * 105.46802 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5821 1.1954 -0.0005 5 6 4.3306 2.5034 -0.0011 6 6 4.2814 0.0018 -0.0002 7 6 5.7883 0.0133 -0.0002 8 8 6.2620 0.3652 -1.3016 9 14 6.4222 -1.6784 0.4549 10 6 3.6021 -1.1992 -0.0002 11 6 2.2066 -1.2080 0.0000 12 6 1.4722 -2.4912 0.0062 13 8 0.2622 -2.4984 0.1214 14 7 2.1444 -3.6530 -0.1160 15 6 1.4168 -4.9244 -0.1104 16 6 2.4078 -6.0799 -0.2632 17 9 3.4937 -5.9839 0.6135 18 6 1.7417 -7.4660 -0.2700 19 6 2.7364 -7.8517 -1.3775 20 1 3.6724 -8.2633 -0.9998 21 6 2.1176 -8.7040 -2.4873 22 8 3.1379 -9.1075 -3.4030 23 6 2.8131 -6.3551 -1.7209 24 1 -0.3633 -0.1173 1.0210 25 1 -0.3633 0.9427 -0.4089 26 1 -0.3633 -0.8255 -0.6119 27 1 1.6582 2.1290 0.0004 28 1 4.5115 2.8189 1.0264 29 1 5.2833 2.3766 -0.5153 30 1 3.7384 3.2607 -0.5148 31 1 6.1461 0.7429 0.7263 32 1 7.2258 0.3920 -1.3755 33 1 5.9628 -2.0429 1.8192 34 1 5.9413 -2.6823 -0.5280 35 1 4.1492 -2.1304 0.0005 36 1 3.1101 -3.6472 -0.2083 37 1 0.8772 -5.0301 0.8307 38 1 0.7088 -4.9415 -0.9390 39 1 1.8825 -8.0226 0.6566 40 1 0.7036 -7.4499 -0.6017 41 1 1.6518 -9.5872 -2.0502 42 1 1.3646 -8.1203 -3.0166 43 1 2.8169 -9.6526 -4.1343 44 1 2.0678 -6.0356 -2.4491 45 1 3.8191 -6.0147 -1.9662 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_9599494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:30 Heat of formation + Delta-G solvation = -114.662586 kcal Electronic energy + Delta-G solvation = -28049.080655 eV Core-core repulsion = 23948.242295 eV Total energy + Delta-G solvation = -4100.838360 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -48.90871 -41.62232 -40.23326 -39.69791 -37.69141 -37.28081 -35.83156 -34.41669 -33.49111 -30.64287 -29.23844 -28.56709 -27.26808 -26.94645 -25.42655 -23.70728 -22.73734 -22.02494 -21.04901 -20.67476 -18.79369 -18.49130 -18.39600 -17.74719 -17.18056 -16.84170 -16.74029 -16.43804 -16.36241 -16.10663 -15.96389 -15.43062 -15.03334 -15.01986 -14.96542 -14.77002 -14.52484 -14.30062 -13.95492 -13.89448 -13.73675 -13.57023 -13.41075 -13.31119 -13.03446 -12.87779 -12.68742 -12.54650 -12.49314 -12.02373 -12.01059 -11.88332 -11.59720 -11.44731 -10.98000 -10.65292 -10.37558 -10.25233 -9.89760 -9.58942 -5.06684 -0.22151 0.16699 1.19709 1.55204 1.78376 1.87836 1.93731 2.64870 2.86919 2.97210 3.03868 3.20194 3.27451 3.37996 3.55178 3.59117 3.65137 3.78665 3.82492 4.09207 4.10519 4.16970 4.19197 4.31106 4.36187 4.38904 4.40362 4.48245 4.51249 4.52053 4.54723 4.64022 4.69190 4.75144 4.77943 4.82442 4.87303 4.93713 5.05190 5.10620 5.16911 5.24824 5.36599 5.47337 5.55788 5.81014 6.32948 6.54889 6.57927 7.11890 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.008 4.008 3 C -0.132 4.132 4 C -0.023 4.023 5 C -0.126 4.126 6 C -0.092 4.092 7 C -0.066 4.066 8 O -0.543 6.543 9 Si 0.675 3.325 10 C -0.079 4.079 11 C -0.147 4.147 12 C 0.563 3.437 13 O -0.525 6.525 14 N -0.728 5.728 15 C 0.114 3.886 16 C 0.077 3.923 17 F -0.185 7.185 18 C -0.140 4.140 19 C -0.108 4.108 20 H 0.105 0.895 21 C 0.086 3.914 22 O -0.573 6.573 23 C -0.147 4.147 24 H 0.078 0.922 25 H 0.061 0.939 26 H 0.096 0.904 27 H 0.136 0.864 28 H 0.076 0.924 29 H 0.083 0.917 30 H 0.072 0.928 31 H 0.076 0.924 32 H 0.382 0.618 33 H -0.252 1.252 34 H -0.249 1.249 35 H 0.121 0.879 36 H 0.401 0.599 37 H 0.084 0.916 38 H 0.092 0.908 39 H 0.090 0.910 40 H 0.106 0.894 41 H 0.051 0.949 42 H 0.050 0.950 43 H 0.382 0.618 44 H 0.103 0.897 45 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.889 -0.098 -0.952 3.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.009 4.009 3 C -0.150 4.150 4 C -0.023 4.023 5 C -0.182 4.182 6 C -0.092 4.092 7 C -0.177 4.177 8 O -0.349 6.349 9 Si 0.576 3.424 10 C -0.097 4.097 11 C -0.150 4.150 12 C 0.352 3.648 13 O -0.403 6.403 14 N -0.381 5.381 15 C -0.010 4.010 16 C 0.058 3.942 17 F -0.165 7.165 18 C -0.178 4.178 19 C -0.126 4.126 20 H 0.124 0.876 21 C 0.008 3.992 22 O -0.379 6.379 23 C -0.185 4.185 24 H 0.097 0.903 25 H 0.080 0.920 26 H 0.114 0.886 27 H 0.153 0.847 28 H 0.094 0.906 29 H 0.102 0.898 30 H 0.091 0.909 31 H 0.094 0.906 32 H 0.230 0.770 33 H -0.176 1.176 34 H -0.174 1.174 35 H 0.139 0.861 36 H 0.236 0.764 37 H 0.102 0.898 38 H 0.110 0.890 39 H 0.109 0.891 40 H 0.125 0.875 41 H 0.069 0.931 42 H 0.068 0.932 43 H 0.230 0.770 44 H 0.122 0.878 45 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 1.550 -0.578 -0.317 1.685 hybrid contribution -0.095 -0.024 -0.237 0.257 sum 1.455 -0.603 -0.554 1.670 Atomic orbital electron populations 1.21119 0.89492 1.03383 1.03888 1.20095 0.97098 0.91139 0.92548 1.21046 0.93290 0.97898 1.02746 1.20017 0.93485 0.95140 0.93677 1.20986 1.01206 0.93240 1.02801 1.19049 0.93553 0.92633 1.03990 1.24577 0.93011 1.11181 0.88958 1.86512 1.26889 1.92797 1.28701 0.95268 0.90994 0.75900 0.80238 1.21067 0.93424 0.97298 0.97930 1.19546 0.92790 0.93276 1.09363 1.18202 0.87057 0.83404 0.76161 1.90749 1.13384 1.87042 1.49096 1.45795 1.11188 1.05593 1.75528 1.21822 0.93903 0.80859 1.04394 1.22111 0.85365 0.96315 0.90397 1.92876 1.56073 1.97056 1.70516 1.23544 1.00162 0.93712 1.00416 1.22502 1.00230 0.94719 0.95162 0.87647 1.22137 0.89666 0.97323 0.90080 1.86490 1.36753 1.73702 1.40921 1.23717 1.04118 0.96245 0.94379 0.90310 0.91971 0.88591 0.84659 0.90588 0.89797 0.90937 0.90602 0.77012 1.17595 1.17414 0.86131 0.76382 0.89792 0.88967 0.89087 0.87512 0.93086 0.93200 0.77046 0.87848 0.89723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.32 8.73 36.01 0.31 -0.01 16 2 C -0.01 -0.03 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.27 9.31 -39.64 -0.37 -0.63 16 4 C -0.02 -0.04 5.89 -104.53 -0.62 -0.66 16 5 C -0.13 0.05 9.31 36.01 0.34 0.38 16 6 C -0.09 -0.22 5.29 -104.69 -0.55 -0.78 16 7 C -0.07 0.02 1.87 36.00 0.07 0.09 16 8 O -0.54 0.23 11.89 -35.23 -0.42 -0.18 16 9 Si 0.67 -0.61 30.19 -169.99 -5.13 -5.74 16 10 C -0.08 -0.25 8.13 -39.18 -0.32 -0.56 16 11 C -0.15 -0.57 5.87 -104.97 -0.62 -1.19 16 12 C 0.56 2.41 7.70 -12.33 -0.09 2.32 16 13 O -0.52 -3.27 13.35 5.32 0.07 -3.20 16 14 N -0.73 -1.64 5.42 -61.26 -0.33 -1.97 16 15 C 0.11 0.07 5.37 -4.05 -0.02 0.05 16 16 C 0.08 0.00 1.67 -89.81 -0.15 -0.15 16 17 F -0.18 -0.46 16.80 2.25 0.04 -0.42 16 18 C -0.14 0.23 7.10 -25.92 -0.18 0.05 16 19 C -0.11 0.06 3.99 -89.83 -0.36 -0.30 16 20 H 0.11 0.08 8.14 -51.93 -0.42 -0.34 16 21 C 0.09 -0.11 6.88 37.16 0.26 0.15 16 22 O -0.57 -0.22 13.66 -35.23 -0.48 -0.70 16 23 C -0.15 0.07 7.08 -25.94 -0.18 -0.11 16 24 H 0.08 0.22 8.14 -51.93 -0.42 -0.20 16 25 H 0.06 0.05 8.04 -51.93 -0.42 -0.36 16 26 H 0.10 0.40 5.87 -51.93 -0.30 0.09 16 27 H 0.14 -0.01 8.06 -52.48 -0.42 -0.44 16 28 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.08 -0.03 6.18 -51.93 -0.32 -0.35 16 30 H 0.07 -0.07 8.08 -51.93 -0.42 -0.49 16 31 H 0.08 -0.15 7.38 -51.93 -0.38 -0.53 16 32 H 0.38 -2.05 8.74 45.56 0.40 -1.65 16 33 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 34 H -0.25 -0.39 6.75 56.52 0.38 -0.01 16 35 H 0.12 0.27 3.28 -52.48 -0.17 0.10 16 36 H 0.40 0.64 6.26 -40.82 -0.26 0.38 16 37 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 38 H 0.09 -0.02 7.94 -51.93 -0.41 -0.43 16 39 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.11 -0.36 8.06 -51.93 -0.42 -0.78 16 41 H 0.05 -0.11 8.14 -51.93 -0.42 -0.54 16 42 H 0.05 -0.12 7.84 -51.93 -0.41 -0.53 16 43 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 44 H 0.10 -0.15 7.71 -51.93 -0.40 -0.55 16 45 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 LS Contribution 364.81 15.07 5.50 5.50 Total: 0.00 -8.74 364.81 -9.57 -18.30 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -5.70 Total: -9.58 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -3.11 Total: -2.00 kcal Atomic # 7 Polarization: -1.64 SS G_CDS: -0.33 Total: -1.97 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.83 Total: -4.08 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.13 Total: -5.74 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.74 -9.57 -18.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_9599494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.362 kcal (2) G-P(sol) polarization free energy of solvation -8.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.097 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.663 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds