Wall clock time and date at job start Sun Mar 7 2021 09:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37931 * 120.07395 * 2 1 4 4 C 1.38386 * 120.14667 * 180.02562 * 3 2 1 5 5 C 1.50700 * 119.85256 * 179.97438 * 4 3 2 6 6 C 1.38338 * 120.29272 * 359.95854 * 4 3 2 7 7 C 1.50693 * 119.92817 * 180.02562 * 6 4 3 8 8 O 1.42898 * 109.47255 * 285.00004 * 7 6 4 9 9 Si 1.86299 * 109.47199 * 164.99861 * 7 6 4 10 10 C 1.37975 * 120.14102 * 0.04122 * 6 4 3 11 11 C 1.39560 * 119.85772 * 359.97438 * 10 6 4 12 12 C 1.47846 * 120.14660 * 180.27601 * 11 10 6 13 13 O 1.21553 * 120.00046 * 173.72362 * 12 11 10 14 14 N 1.34781 * 120.00024 * 353.72593 * 12 11 10 15 15 C 1.46493 * 120.00143 * 180.02562 * 14 12 11 16 16 C 1.52997 * 109.47290 * 179.97438 * 15 14 12 17 17 F 1.39896 * 112.85114 * 48.80140 * 16 15 14 18 18 C 1.53782 * 113.61539 * 180.02562 * 16 15 14 19 19 C 1.53782 * 87.08071 * 139.98070 * 18 16 15 20 20 H 1.08999 * 113.61509 * 89.20011 * 19 18 16 21 21 C 1.53002 * 113.61027 * 220.01687 * 19 18 16 22 22 O 1.42909 * 109.46908 * 185.00093 * 21 19 18 23 23 C 1.53777 * 113.61361 * 277.49844 * 16 15 14 24 24 H 1.09002 * 109.46934 * 263.44589 * 1 2 3 25 25 H 1.08995 * 109.47100 * 23.44969 * 1 2 3 26 26 H 1.08995 * 109.47042 * 143.45191 * 1 2 3 27 27 H 1.08007 * 119.92601 * 0.02666 * 3 2 1 28 28 H 1.09001 * 109.46953 * 90.00646 * 5 4 3 29 29 H 1.09005 * 109.47048 * 209.99862 * 5 4 3 30 30 H 1.09001 * 109.47668 * 330.00430 * 5 4 3 31 31 H 1.09003 * 109.47338 * 45.00236 * 7 6 4 32 32 H 0.96700 * 113.99971 * 180.02562 * 8 7 6 33 33 H 1.48505 * 110.00132 * 298.68503 * 9 7 6 34 34 H 1.48504 * 109.99733 * 59.99925 * 9 7 6 35 35 H 1.08006 * 120.07155 * 180.02562 * 10 6 4 36 36 H 0.97005 * 119.99820 * 359.97438 * 14 12 11 37 37 H 1.08998 * 109.47035 * 299.99921 * 15 14 12 38 38 H 1.09000 * 109.47238 * 59.99794 * 15 14 12 39 39 H 1.09005 * 113.61307 * 254.52711 * 18 16 15 40 40 H 1.08995 * 113.61333 * 25.43233 * 18 16 15 41 41 H 1.08998 * 109.47262 * 304.99992 * 21 19 18 42 42 H 1.08996 * 109.47111 * 65.00483 * 21 19 18 43 43 H 0.96696 * 113.99906 * 179.97438 * 22 21 19 44 44 H 1.08998 * 113.61629 * 334.56077 * 23 16 15 45 45 H 1.08997 * 113.62016 * 105.46802 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5821 1.1954 -0.0005 5 6 4.3306 2.5034 -0.0011 6 6 4.2814 0.0018 -0.0002 7 6 5.7883 0.0133 -0.0002 8 8 6.2620 0.3652 -1.3016 9 14 6.4222 -1.6784 0.4549 10 6 3.6021 -1.1992 -0.0002 11 6 2.2066 -1.2080 0.0000 12 6 1.4722 -2.4912 0.0062 13 8 0.2622 -2.4984 0.1214 14 7 2.1444 -3.6530 -0.1160 15 6 1.4168 -4.9244 -0.1104 16 6 2.4078 -6.0799 -0.2632 17 9 3.4937 -5.9839 0.6135 18 6 1.7417 -7.4660 -0.2700 19 6 2.7364 -7.8517 -1.3775 20 1 3.6724 -8.2633 -0.9998 21 6 2.1176 -8.7040 -2.4873 22 8 3.1379 -9.1075 -3.4030 23 6 2.8131 -6.3551 -1.7209 24 1 -0.3633 -0.1173 1.0210 25 1 -0.3633 0.9427 -0.4089 26 1 -0.3633 -0.8255 -0.6119 27 1 1.6582 2.1290 0.0004 28 1 4.5115 2.8189 1.0264 29 1 5.2833 2.3766 -0.5153 30 1 3.7384 3.2607 -0.5148 31 1 6.1461 0.7429 0.7263 32 1 7.2258 0.3920 -1.3755 33 1 5.9628 -2.0429 1.8192 34 1 5.9413 -2.6823 -0.5280 35 1 4.1492 -2.1304 0.0005 36 1 3.1101 -3.6472 -0.2083 37 1 0.8772 -5.0301 0.8307 38 1 0.7088 -4.9415 -0.9390 39 1 1.8825 -8.0226 0.6566 40 1 0.7036 -7.4499 -0.6017 41 1 1.6518 -9.5872 -2.0502 42 1 1.3646 -8.1203 -3.0166 43 1 2.8169 -9.6526 -4.1343 44 1 2.0678 -6.0356 -2.4491 45 1 3.8191 -6.0147 -1.9662 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500592_9599494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:29 Heat of formation + Delta-G solvation = -115.483843 kcal Electronic energy + Delta-G solvation = -28049.116268 eV Core-core repulsion = 23948.242295 eV Total energy + Delta-G solvation = -4100.873973 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -49.03971 -41.82357 -40.31174 -39.78043 -37.67100 -37.26038 -36.02561 -34.53317 -33.61665 -30.70899 -29.33051 -28.60675 -27.23796 -26.92554 -25.52377 -23.82315 -22.81498 -22.17118 -21.13194 -20.72707 -18.96161 -18.41631 -18.33509 -17.88214 -17.25305 -16.92051 -16.82759 -16.54376 -16.53199 -16.22520 -16.06415 -15.48229 -15.09516 -15.04221 -15.02133 -14.83815 -14.68689 -14.34321 -14.02291 -14.00302 -13.82750 -13.51331 -13.47172 -13.31534 -13.14723 -12.93097 -12.75366 -12.66955 -12.48547 -12.16936 -11.97450 -11.92312 -11.58178 -11.45539 -10.93702 -10.86714 -10.48147 -10.32209 -10.04817 -9.74802 -5.04883 -0.41966 0.00592 1.22966 1.50284 1.58501 1.76575 1.88123 2.46646 2.92482 2.98615 3.02837 3.23182 3.23722 3.40299 3.40571 3.46378 3.70366 3.73337 3.84901 4.00504 4.09037 4.13353 4.27482 4.33711 4.36775 4.42544 4.43785 4.48375 4.50442 4.53462 4.60209 4.62350 4.68686 4.74966 4.77505 4.78100 4.79560 4.88504 4.93631 4.99740 5.13618 5.23344 5.27236 5.36079 5.37631 5.69194 6.08692 6.84023 6.84993 6.89715 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.023 4.023 3 C -0.134 4.134 4 C -0.027 4.027 5 C -0.124 4.124 6 C -0.108 4.108 7 C -0.066 4.066 8 O -0.557 6.557 9 Si 0.753 3.247 10 C -0.092 4.092 11 C -0.166 4.166 12 C 0.559 3.441 13 O -0.551 6.551 14 N -0.725 5.725 15 C 0.114 3.886 16 C 0.071 3.929 17 F -0.202 7.202 18 C -0.128 4.128 19 C -0.111 4.111 20 H 0.086 0.914 21 C 0.084 3.916 22 O -0.599 6.599 23 C -0.145 4.145 24 H 0.073 0.927 25 H 0.081 0.919 26 H 0.078 0.922 27 H 0.157 0.843 28 H 0.090 0.910 29 H 0.086 0.914 30 H 0.081 0.919 31 H 0.100 0.900 32 H 0.404 0.596 33 H -0.294 1.294 34 H -0.289 1.289 35 H 0.120 0.880 36 H 0.402 0.598 37 H 0.080 0.920 38 H 0.104 0.896 39 H 0.092 0.908 40 H 0.130 0.870 41 H 0.062 0.938 42 H 0.065 0.935 43 H 0.398 0.602 44 H 0.117 0.883 45 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.198 0.853 -1.344 3.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.024 4.024 3 C -0.151 4.151 4 C -0.028 4.028 5 C -0.180 4.180 6 C -0.108 4.108 7 C -0.177 4.177 8 O -0.367 6.367 9 Si 0.660 3.340 10 C -0.110 4.110 11 C -0.169 4.169 12 C 0.348 3.652 13 O -0.431 6.431 14 N -0.377 5.377 15 C -0.010 4.010 16 C 0.052 3.948 17 F -0.183 7.183 18 C -0.166 4.166 19 C -0.129 4.129 20 H 0.104 0.896 21 C 0.007 3.993 22 O -0.408 6.408 23 C -0.183 4.183 24 H 0.091 0.909 25 H 0.099 0.901 26 H 0.096 0.904 27 H 0.175 0.825 28 H 0.108 0.892 29 H 0.105 0.895 30 H 0.100 0.900 31 H 0.118 0.882 32 H 0.255 0.745 33 H -0.221 1.221 34 H -0.216 1.216 35 H 0.137 0.863 36 H 0.238 0.762 37 H 0.098 0.902 38 H 0.122 0.878 39 H 0.110 0.890 40 H 0.148 0.852 41 H 0.081 0.919 42 H 0.083 0.917 43 H 0.248 0.752 44 H 0.135 0.865 45 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.904 0.369 -0.728 2.072 hybrid contribution -0.164 -0.354 -0.129 0.411 sum 1.740 0.015 -0.857 1.940 Atomic orbital electron populations 1.21033 0.89333 1.03615 1.03272 1.20290 0.97436 0.91551 0.93146 1.21331 0.93662 0.98192 1.01959 1.20377 0.93676 0.96045 0.92675 1.21040 1.01089 0.92023 1.03844 1.19468 0.95274 0.92523 1.03504 1.24581 0.91366 1.11944 0.89784 1.86462 1.29174 1.92694 1.28351 0.94537 0.89426 0.74088 0.75956 1.21177 0.93334 0.97910 0.98591 1.19671 0.93282 0.93436 1.10534 1.18386 0.86866 0.84068 0.75897 1.90726 1.14276 1.87466 1.50600 1.45840 1.11331 1.05824 1.74655 1.21943 0.94113 0.80282 1.04650 1.22285 0.84958 0.97094 0.90416 1.92837 1.57081 1.97187 1.71193 1.23551 1.00981 0.91903 1.00129 1.22466 0.99906 0.94584 0.95962 0.89552 1.22217 0.89465 0.97852 0.89765 1.86444 1.38087 1.74301 1.41920 1.23745 1.03755 0.96520 0.94252 0.90891 0.90066 0.90387 0.82506 0.89166 0.89519 0.90033 0.88187 0.74451 1.22086 1.21624 0.86288 0.76208 0.90206 0.87802 0.88979 0.85194 0.91935 0.91698 0.75204 0.86489 0.91094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.75 8.73 71.24 0.62 -0.12 16 2 C -0.02 -0.18 5.91 -19.61 -0.12 -0.29 16 3 C -0.13 -0.51 9.31 22.23 0.21 -0.30 16 4 C -0.03 -0.09 5.89 -19.81 -0.12 -0.21 16 5 C -0.12 0.31 9.31 71.24 0.66 0.97 16 6 C -0.11 -0.54 5.29 -19.91 -0.11 -0.65 16 7 C -0.07 0.08 1.87 71.23 0.13 0.21 16 8 O -0.56 1.14 11.89 -148.98 -1.77 -0.63 16 9 Si 0.75 -0.82 30.19 68.60 2.07 1.25 16 10 C -0.09 -0.71 8.13 22.53 0.18 -0.53 16 11 C -0.17 -1.60 5.87 -20.09 -0.12 -1.72 16 12 C 0.56 5.98 7.70 86.79 0.67 6.65 16 13 O -0.55 -8.03 13.35 -3.88 -0.05 -8.08 16 14 N -0.72 -4.71 5.42 -465.99 -2.52 -7.23 16 15 C 0.11 0.28 5.37 86.38 0.46 0.74 16 16 C 0.07 0.08 1.67 -10.27 -0.02 0.06 16 17 F -0.20 -1.40 16.80 44.97 0.76 -0.65 16 18 C -0.13 0.43 7.10 31.12 0.22 0.65 16 19 C -0.11 0.07 3.99 -10.28 -0.04 0.03 16 20 H 0.09 0.27 8.14 -2.39 -0.02 0.25 16 21 C 0.08 -0.25 6.88 71.98 0.50 0.25 16 22 O -0.60 -0.53 13.66 -148.98 -2.04 -2.57 16 23 C -0.15 0.01 7.08 31.11 0.22 0.23 16 24 H 0.07 0.52 8.14 -2.39 -0.02 0.50 16 25 H 0.08 0.14 8.04 -2.39 -0.02 0.13 16 26 H 0.08 0.80 5.87 -2.39 -0.01 0.79 16 27 H 0.16 -0.22 8.06 -2.91 -0.02 -0.24 16 28 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 29 H 0.09 -0.23 6.18 -2.38 -0.01 -0.25 16 30 H 0.08 -0.33 8.08 -2.39 -0.02 -0.35 16 31 H 0.10 -0.59 7.38 -2.39 -0.02 -0.61 16 32 H 0.40 -5.03 8.74 -74.06 -0.65 -5.68 16 33 H -0.29 -1.68 7.11 99.48 0.71 -0.98 16 34 H -0.29 -1.50 6.75 99.48 0.67 -0.83 16 35 H 0.12 0.82 3.28 -2.91 -0.01 0.81 16 36 H 0.40 2.27 6.26 -92.70 -0.58 1.69 16 37 H 0.08 0.27 8.14 -2.39 -0.02 0.25 16 38 H 0.10 0.01 7.94 -2.39 -0.02 -0.01 16 39 H 0.09 -0.29 8.14 -2.38 -0.02 -0.31 16 40 H 0.13 -1.04 8.06 -2.39 -0.02 -1.06 16 41 H 0.06 -0.33 8.14 -2.39 -0.02 -0.35 16 42 H 0.06 -0.39 7.84 -2.39 -0.02 -0.41 16 43 H 0.40 -3.06 9.12 -74.06 -0.68 -3.74 16 44 H 0.12 -0.35 7.71 -2.39 -0.02 -0.36 16 45 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 Total: 0.00 -21.96 364.81 -1.05 -23.01 By element: Atomic # 1 Polarization: -10.21 SS G_CDS: -0.85 Total: -11.06 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: 3.36 Total: 5.96 kcal Atomic # 7 Polarization: -4.71 SS G_CDS: -2.52 Total: -7.23 kcal Atomic # 8 Polarization: -7.42 SS G_CDS: -3.86 Total: -11.28 kcal Atomic # 9 Polarization: -1.40 SS G_CDS: 0.76 Total: -0.65 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: 2.07 Total: 1.25 kcal Total: -21.96 -1.05 -23.01 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_9599494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.479 kcal (2) G-P(sol) polarization free energy of solvation -21.958 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.005 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds