Wall clock time and date at job start Sun Mar 7 2021 09:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42903 * 109.47359 * 2 1 4 4 C 1.35895 * 117.00165 * 84.94211 * 3 2 1 5 5 C 1.38735 * 120.05396 * 174.27576 * 4 3 2 6 6 C 1.38150 * 119.94210 * 179.74913 * 5 4 3 7 7 C 1.38266 * 120.05607 * 0.50709 * 6 5 4 8 8 C 1.50693 * 119.94713 * 179.74758 * 7 6 5 9 9 O 1.42902 * 109.47338 * 120.01943 * 8 7 6 10 10 Si 1.86307 * 109.46798 * 0.02562 * 8 7 6 11 11 C 1.38270 * 120.10955 * 359.76718 * 7 6 5 12 12 C 1.38139 * 120.05795 * 359.97438 * 11 7 6 13 13 C 1.50704 * 109.47500 * 239.99380 * 2 1 3 14 14 O 1.21275 * 119.99757 * 120.00164 * 13 2 1 15 15 N 1.34777 * 119.99712 * 300.00623 * 13 2 1 16 16 C 1.46504 * 119.99542 * 179.97438 * 15 13 2 17 17 C 1.52999 * 109.47011 * 179.97438 * 16 15 13 18 18 F 1.39905 * 112.85232 * 316.19931 * 17 16 15 19 19 C 1.54061 * 113.69193 * 87.46763 * 17 16 15 20 20 C 1.53779 * 86.98167 * 139.98936 * 19 17 16 21 21 H 1.08998 * 113.61710 * 219.97987 * 20 19 17 22 22 C 1.53002 * 113.61490 * 89.16018 * 20 19 17 23 23 O 1.42902 * 109.46705 * 85.86143 * 22 20 19 24 24 C 1.53776 * 113.61636 * 184.99996 * 17 16 15 25 25 H 1.09003 * 109.47403 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47487 * 300.00704 * 1 2 3 27 27 H 1.09003 * 109.47000 * 60.00167 * 1 2 3 28 28 H 1.09003 * 109.47000 * 119.99833 * 2 1 3 29 29 H 1.07997 * 120.02790 * 359.97438 * 5 4 3 30 30 H 1.07995 * 119.96995 * 180.23601 * 6 5 4 31 31 H 1.09000 * 109.47261 * 240.02484 * 8 7 6 32 32 H 0.96704 * 114.00137 * 180.02562 * 9 8 7 33 33 H 1.48501 * 109.99862 * 298.67994 * 10 8 7 34 34 H 1.48495 * 109.99933 * 59.99892 * 10 8 7 35 35 H 1.08004 * 119.97099 * 179.97438 * 11 7 6 36 36 H 1.08005 * 120.02949 * 179.97438 * 12 11 7 37 37 H 0.97001 * 120.00157 * 359.97438 * 15 13 2 38 38 H 1.09002 * 109.46779 * 59.99913 * 16 15 13 39 39 H 1.08999 * 109.47501 * 299.99833 * 16 15 13 40 40 H 1.08996 * 113.60820 * 25.48600 * 19 17 16 41 41 H 1.08997 * 113.69230 * 254.50168 * 19 17 16 42 42 H 1.09003 * 109.47582 * 205.85630 * 22 20 19 43 43 H 1.08994 * 109.47425 * 325.86606 * 22 20 19 44 44 H 0.96707 * 113.99649 * 180.02562 * 23 22 20 45 45 H 1.08996 * 113.61712 * 105.38463 * 24 17 16 46 46 H 1.09004 * 113.61247 * 334.48575 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9646 1.2061 5 6 2.6776 3.2281 1.2930 6 6 2.7785 3.8557 2.5195 7 6 2.3254 3.2212 3.6614 8 6 2.4418 3.9057 4.9989 9 8 1.1404 4.0662 5.5668 10 14 3.2317 5.5779 4.7739 11 6 1.7659 1.9595 3.5782 12 6 1.6578 1.3299 2.3534 13 6 2.0324 -0.7105 -1.2304 14 8 2.7297 -0.1212 -2.0287 15 7 1.7067 -2.0009 -1.4436 16 6 2.1947 -2.6914 -2.6399 17 6 1.6853 -4.1341 -2.6395 18 9 1.7950 -4.7487 -1.3875 19 6 0.2985 -4.3011 -3.2895 20 6 0.8372 -5.5993 -3.9135 21 1 0.5151 -5.7554 -4.9430 22 6 0.6319 -6.8337 -3.0331 23 8 -0.6674 -7.3784 -3.2722 24 6 2.2416 -4.9842 -3.7939 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 1.8933 -0.5138 0.8900 29 1 3.0358 3.7222 0.4020 30 1 3.2157 4.8409 2.5871 31 1 3.0567 3.3000 5.6647 32 1 1.1390 4.5013 6.4304 33 1 4.5982 5.4229 4.2135 34 1 2.4030 6.4133 3.8681 35 1 1.4130 1.4658 4.4716 36 1 1.2211 0.3442 2.2890 37 1 1.1492 -2.4723 -0.8049 38 1 3.2847 -2.6913 -2.6402 39 1 1.8311 -2.1776 -3.5298 40 1 0.0640 -3.5290 -4.0222 41 1 -0.5053 -4.4627 -2.5712 42 1 1.3887 -7.5807 -3.2725 43 1 0.7197 -6.5506 -1.9842 44 1 -0.8669 -8.1651 -2.7463 45 1 3.0054 -5.6968 -3.4827 46 1 2.5372 -4.3985 -4.6644 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_10157680.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:38 Heat of formation + Delta-G solvation = -143.240851 kcal Electronic energy + Delta-G solvation = -29310.852552 eV Core-core repulsion = 24890.092753 eV Total energy + Delta-G solvation = -4420.759799 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -48.97537 -41.91024 -40.75842 -39.85465 -39.06079 -37.28065 -37.18092 -35.85083 -33.53507 -32.26490 -31.69456 -30.11295 -27.24829 -27.01964 -26.63247 -25.25685 -24.24946 -22.93338 -22.38390 -21.56252 -20.14856 -19.64105 -19.09271 -18.40132 -18.28416 -17.54993 -17.18680 -17.11860 -16.89091 -16.85100 -16.53403 -16.20900 -16.06734 -15.77769 -15.46377 -15.35058 -15.15302 -14.87097 -14.60377 -14.49733 -14.30389 -13.97918 -13.91472 -13.80913 -13.55171 -13.48518 -13.37965 -13.19233 -13.00104 -12.47417 -12.46862 -12.26672 -12.01416 -11.88026 -11.81936 -11.61119 -11.33902 -11.06310 -10.80354 -10.38775 -10.30364 -10.21635 -9.33720 -4.96377 0.06006 0.17275 1.26293 1.30822 1.34999 1.62545 1.97204 2.32376 2.47873 2.96842 3.06641 3.12013 3.22048 3.36689 3.40692 3.47022 3.55658 3.67537 3.69620 3.72968 3.88922 3.89797 4.12088 4.15969 4.19385 4.34116 4.39378 4.41639 4.47147 4.50471 4.53727 4.56485 4.59838 4.64057 4.67965 4.81924 4.84744 4.90823 4.98153 4.99497 5.04186 5.13333 5.13602 5.26994 5.33075 5.50697 6.09285 6.26918 6.82164 6.91658 6.92933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.063 3.937 3 O -0.310 6.310 4 C 0.122 3.878 5 C -0.161 4.161 6 C -0.099 4.099 7 C -0.129 4.129 8 C -0.068 4.068 9 O -0.563 6.563 10 Si 0.767 3.233 11 C -0.051 4.051 12 C -0.203 4.203 13 C 0.520 3.480 14 O -0.565 6.565 15 N -0.708 5.708 16 C 0.112 3.888 17 C 0.082 3.918 18 F -0.192 7.192 19 C -0.142 4.142 20 C -0.118 4.118 21 H 0.092 0.908 22 C 0.082 3.918 23 O -0.594 6.594 24 C -0.135 4.135 25 H 0.109 0.891 26 H 0.085 0.915 27 H 0.063 0.937 28 H 0.127 0.873 29 H 0.131 0.869 30 H 0.121 0.879 31 H 0.098 0.902 32 H 0.404 0.596 33 H -0.291 1.291 34 H -0.301 1.301 35 H 0.152 0.848 36 H 0.162 0.838 37 H 0.418 0.582 38 H 0.075 0.925 39 H 0.096 0.904 40 H 0.114 0.886 41 H 0.081 0.919 42 H 0.056 0.944 43 H 0.057 0.943 44 H 0.397 0.603 45 H 0.090 0.910 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.722 -4.596 5.727 7.543 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.004 3.996 3 O -0.223 6.223 4 C 0.077 3.923 5 C -0.180 4.180 6 C -0.117 4.117 7 C -0.129 4.129 8 C -0.179 4.179 9 O -0.373 6.373 10 Si 0.674 3.326 11 C -0.069 4.069 12 C -0.221 4.221 13 C 0.305 3.695 14 O -0.443 6.443 15 N -0.362 5.362 16 C -0.011 4.011 17 C 0.064 3.936 18 F -0.172 7.172 19 C -0.179 4.179 20 C -0.136 4.136 21 H 0.110 0.890 22 C 0.005 3.995 23 O -0.402 6.402 24 C -0.173 4.173 25 H 0.128 0.872 26 H 0.104 0.896 27 H 0.082 0.918 28 H 0.144 0.856 29 H 0.149 0.851 30 H 0.138 0.862 31 H 0.116 0.884 32 H 0.255 0.745 33 H -0.219 1.219 34 H -0.229 1.229 35 H 0.170 0.830 36 H 0.179 0.821 37 H 0.256 0.744 38 H 0.093 0.907 39 H 0.114 0.886 40 H 0.132 0.868 41 H 0.100 0.900 42 H 0.074 0.926 43 H 0.075 0.925 44 H 0.247 0.753 45 H 0.109 0.891 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -1.033 -3.363 3.483 4.950 hybrid contribution -0.086 -1.102 0.245 1.132 sum -1.119 -4.464 3.728 5.923 Atomic orbital electron populations 1.22382 0.90312 1.05731 1.04588 1.22434 0.97328 0.82006 0.97873 1.86175 1.81484 1.27061 1.27625 1.19144 0.95810 0.92807 0.84576 1.20465 1.04222 0.94649 0.98616 1.20780 0.99862 0.98777 0.92239 1.19668 1.02809 0.96289 0.94136 1.24640 0.90410 1.09376 0.93425 1.86432 1.26381 1.83830 1.40635 0.94592 0.74996 0.76249 0.86713 1.21080 0.94522 0.93288 0.97989 1.21625 1.06017 1.02758 0.91702 1.20432 0.79763 0.82235 0.87032 1.90756 1.38820 1.66899 1.47848 1.45591 1.53815 1.10757 1.26083 1.21911 1.00351 0.89896 0.88988 1.22280 0.99894 0.90827 0.80626 1.92825 1.96937 1.84087 1.43369 1.23726 0.95052 0.98486 1.00643 1.22301 0.96639 0.93703 1.01006 0.88970 1.22127 0.84508 0.94407 0.98460 1.86408 1.34483 1.49628 1.69719 1.23597 0.96939 0.98802 0.97984 0.87221 0.89616 0.91786 0.85608 0.85063 0.86152 0.88417 0.74510 1.21917 1.22923 0.82993 0.82063 0.74433 0.90667 0.88623 0.86763 0.89980 0.92558 0.92510 0.75267 0.89101 0.85713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.69 9.07 71.98 0.65 1.35 16 2 C 0.06 0.08 2.64 29.85 0.08 0.15 16 3 O -0.31 -2.90 9.33 -73.33 -0.68 -3.58 16 4 C 0.12 0.95 6.60 22.51 0.15 1.10 16 5 C -0.16 -1.53 9.99 22.37 0.22 -1.31 16 6 C -0.10 -0.81 8.66 22.26 0.19 -0.62 16 7 C -0.13 -0.69 5.42 -19.85 -0.11 -0.80 16 8 C -0.07 0.03 2.81 71.23 0.20 0.23 16 9 O -0.56 0.49 12.74 -148.98 -1.90 -1.40 16 10 Si 0.77 -0.57 29.78 68.60 2.04 1.47 16 11 C -0.05 -0.14 9.60 22.25 0.21 0.07 16 12 C -0.20 -0.49 8.24 22.37 0.18 -0.31 16 13 C 0.52 2.66 7.23 87.66 0.63 3.29 16 14 O -0.57 -8.78 16.50 16.02 0.26 -8.51 16 15 N -0.71 1.26 5.34 -463.05 -2.47 -1.21 16 16 C 0.11 -0.23 5.43 86.38 0.47 0.24 16 17 C 0.08 -0.35 1.73 -10.17 -0.02 -0.37 16 18 F -0.19 0.26 14.77 44.97 0.66 0.92 16 19 C -0.14 0.65 7.10 31.22 0.22 0.87 16 20 C -0.12 0.39 4.19 -10.27 -0.04 0.35 16 21 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 22 C 0.08 -0.18 6.66 71.98 0.48 0.30 16 23 O -0.59 -0.16 13.66 -148.98 -2.04 -2.20 16 24 C -0.14 0.79 7.13 31.12 0.22 1.01 16 25 H 0.11 -1.12 7.56 -2.39 -0.02 -1.14 16 26 H 0.08 -0.39 6.91 -2.39 -0.02 -0.41 16 27 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 28 H 0.13 -0.53 6.31 -2.39 -0.02 -0.55 16 29 H 0.13 1.19 8.06 -2.91 -0.02 1.16 16 30 H 0.12 0.90 4.87 -2.91 -0.01 0.89 16 31 H 0.10 -0.50 7.96 -2.39 -0.02 -0.52 16 32 H 0.40 -4.60 8.74 -74.05 -0.65 -5.24 16 33 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 34 H -0.30 -2.27 7.11 99.48 0.71 -1.56 16 35 H 0.15 -0.24 8.06 -2.91 -0.02 -0.26 16 36 H 0.16 -0.69 5.43 -2.91 -0.02 -0.70 16 37 H 0.42 -2.89 7.45 -92.71 -0.69 -3.58 16 38 H 0.08 0.00 8.14 -2.39 -0.02 -0.01 16 39 H 0.10 -0.22 7.86 -2.39 -0.02 -0.24 16 40 H 0.11 -0.74 7.91 -2.39 -0.02 -0.76 16 41 H 0.08 -0.28 8.10 -2.39 -0.02 -0.29 16 42 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 43 H 0.06 -0.12 6.28 -2.39 -0.02 -0.14 16 44 H 0.40 -3.09 9.12 -74.05 -0.68 -3.76 16 45 H 0.09 -0.53 8.10 -2.39 -0.02 -0.55 16 46 H 0.12 -1.07 8.10 -2.38 -0.02 -1.09 16 Total: 0.00 -27.72 378.25 -1.30 -29.03 By element: Atomic # 1 Polarization: -19.12 SS G_CDS: -0.93 Total: -20.06 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: 3.75 Total: 5.55 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -2.47 Total: -1.21 kcal Atomic # 8 Polarization: -11.35 SS G_CDS: -4.35 Total: -15.70 kcal Atomic # 9 Polarization: 0.26 SS G_CDS: 0.66 Total: 0.92 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: 2.04 Total: 1.47 kcal Total: -27.72 -1.30 -29.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_10157680.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.216 kcal (2) G-P(sol) polarization free energy of solvation -27.725 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.940 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.025 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds