Wall clock time and date at job start Sun Mar 7 2021 09:00:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47270 * 2 1 4 4 C 1.50703 * 109.47062 * 239.99616 * 2 1 3 5 5 C 1.35447 * 126.06583 * 120.17543 * 4 2 1 6 6 N 1.35529 * 108.87251 * 180.22920 * 5 4 2 7 7 C 1.37654 * 108.64555 * 359.75933 * 6 5 4 8 8 C 1.46670 * 126.23695 * 179.97438 * 7 6 5 9 9 O 1.21701 * 120.00417 * 180.02562 * 8 7 6 10 10 N 1.34781 * 120.00262 * 0.03043 * 8 7 6 11 11 C 1.46493 * 120.00246 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.47131 * 179.97438 * 11 10 8 13 13 F 1.39900 * 112.84717 * 48.80424 * 12 11 10 14 14 C 1.53779 * 113.61356 * 180.02562 * 12 11 10 15 15 C 1.53778 * 87.08003 * 139.98550 * 14 12 11 16 16 H 1.09007 * 113.61525 * 220.02110 * 15 14 12 17 17 C 1.52992 * 113.61836 * 89.19937 * 15 14 12 18 18 O 1.42898 * 109.47373 * 175.00010 * 17 15 14 19 19 C 1.53780 * 113.61362 * 277.50097 * 12 11 10 20 20 C 1.37878 * 107.52979 * 0.02562 * 7 6 5 21 21 H 0.96699 * 114.00244 * 60.00563 * 1 2 3 22 22 H 1.09000 * 109.46739 * 120.00018 * 2 1 3 23 23 H 1.48500 * 110.00127 * 59.99312 * 3 2 1 24 24 H 1.48496 * 110.00208 * 181.31946 * 3 2 1 25 25 H 1.08001 * 125.56625 * 359.97007 * 5 4 2 26 26 H 0.96997 * 125.68259 * 179.75968 * 6 5 4 27 27 H 0.97000 * 119.99672 * 359.97438 * 10 8 7 28 28 H 1.08994 * 109.47613 * 299.99927 * 11 10 8 29 29 H 1.09003 * 109.47390 * 60.00060 * 11 10 8 30 30 H 1.08998 * 113.61210 * 254.52952 * 14 12 11 31 31 H 1.08997 * 113.61686 * 25.34703 * 14 12 11 32 32 H 1.09003 * 109.47218 * 295.00296 * 17 15 14 33 33 H 1.09002 * 109.47144 * 55.00295 * 17 15 14 34 34 H 0.96701 * 114.00218 * 179.97438 * 18 17 15 35 35 H 1.08999 * 113.61201 * 334.56145 * 19 12 11 36 36 H 1.08994 * 113.61195 * 105.46982 * 19 12 11 37 37 H 1.08002 * 126.45376 * 179.97438 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7160 -0.1750 -2.1959 6 7 2.9535 -1.1174 -3.1405 7 6 2.3147 -2.2800 -2.7728 8 6 2.3160 -3.5431 -3.5182 9 8 1.7091 -4.5055 -3.0861 10 7 2.9894 -3.6382 -4.6819 11 6 2.9911 -4.9000 -5.4262 12 6 3.8224 -4.7392 -6.7006 13 9 5.0727 -4.1579 -6.4639 14 6 3.8877 -6.0139 -7.5584 15 6 3.7528 -5.0994 -8.7873 16 1 3.1042 -5.5046 -9.5641 17 6 5.0935 -4.6029 -9.3320 18 8 4.8742 -3.8613 -10.5337 19 6 3.0501 -4.0921 -7.8623 20 6 1.6725 -2.0404 -1.5765 21 1 -0.3933 0.4416 -0.7651 22 1 1.7922 -0.5138 0.8900 23 1 1.5614 2.4679 1.2084 24 1 3.5346 1.7703 -0.0321 25 1 3.0879 0.8388 -2.2127 26 1 3.4851 -0.9934 -3.9423 27 1 3.4728 -2.8712 -5.0265 28 1 3.4228 -5.6864 -4.8072 29 1 1.9681 -5.1669 -5.6914 30 1 4.8461 -6.5299 -7.5013 31 1 3.0383 -6.6815 -7.4138 32 1 5.5715 -3.9616 -8.5914 33 1 5.7379 -5.4560 -9.5441 34 1 5.6829 -3.5149 -10.9352 35 1 1.9711 -4.2339 -7.8019 36 1 3.3321 -3.0563 -8.0507 37 1 1.0783 -2.7458 -1.0145 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16500644_10543058.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:42 Heat of formation + Delta-G solvation = -96.355482 kcal Electronic energy + Delta-G solvation = -22348.108011 eV Core-core repulsion = 18621.938974 eV Total energy + Delta-G solvation = -3726.169037 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 285.121 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.98382 -42.49148 -40.47902 -39.74452 -37.63930 -37.23209 -35.79326 -32.63990 -31.22948 -29.95738 -27.32012 -27.03242 -26.18975 -24.00816 -22.80750 -21.32932 -20.81802 -20.31608 -19.94633 -18.50491 -17.75516 -17.41762 -17.16173 -17.05471 -16.68352 -16.35290 -16.02947 -15.88359 -15.55766 -15.39126 -15.18809 -14.80443 -14.71932 -14.41371 -14.15352 -13.94020 -13.72621 -13.50033 -13.48098 -13.19975 -12.49445 -12.26379 -11.97383 -11.83258 -11.69564 -11.34404 -11.31899 -10.81912 -10.43659 -10.37164 -9.94988 -9.31180 -4.92127 0.31635 1.40036 1.52777 1.72776 1.82300 2.08276 2.09674 2.20642 2.97588 3.07740 3.14180 3.21989 3.46041 3.67227 3.76117 3.87362 3.96624 4.14938 4.18999 4.34478 4.36320 4.40351 4.52753 4.54449 4.63781 4.65650 4.67830 4.84319 4.86714 4.90162 4.97692 5.03081 5.13676 5.26751 5.55356 5.70448 6.23581 6.45981 6.82291 6.90677 6.94079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.052 4.052 3 Si 0.801 3.199 4 C -0.227 4.227 5 C 0.061 3.939 6 N -0.517 5.517 7 C -0.072 4.072 8 C 0.590 3.410 9 O -0.572 6.572 10 N -0.716 5.716 11 C 0.113 3.887 12 C 0.081 3.919 13 F -0.194 7.194 14 C -0.135 4.135 15 C -0.117 4.117 16 H 0.093 0.907 17 C 0.083 3.917 18 O -0.593 6.593 19 C -0.141 4.141 20 C -0.101 4.101 21 H 0.393 0.607 22 H 0.092 0.908 23 H -0.310 1.310 24 H -0.273 1.273 25 H 0.216 0.784 26 H 0.436 0.564 27 H 0.410 0.590 28 H 0.074 0.926 29 H 0.098 0.902 30 H 0.090 0.910 31 H 0.126 0.874 32 H 0.056 0.944 33 H 0.056 0.944 34 H 0.398 0.602 35 H 0.114 0.886 36 H 0.082 0.918 37 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.473 4.574 -6.621 8.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.161 4.161 3 Si 0.706 3.294 4 C -0.233 4.233 5 C -0.078 4.078 6 N -0.114 5.114 7 C -0.185 4.185 8 C 0.379 3.621 9 O -0.452 6.452 10 N -0.367 5.367 11 C -0.011 4.011 12 C 0.062 3.938 13 F -0.174 7.174 14 C -0.173 4.173 15 C -0.135 4.135 16 H 0.111 0.889 17 C 0.005 3.995 18 O -0.402 6.402 19 C -0.178 4.178 20 C -0.129 4.129 21 H 0.243 0.757 22 H 0.109 0.891 23 H -0.238 1.238 24 H -0.199 1.199 25 H 0.232 0.768 26 H 0.277 0.723 27 H 0.246 0.754 28 H 0.092 0.908 29 H 0.116 0.884 30 H 0.108 0.892 31 H 0.144 0.856 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.247 0.753 35 H 0.133 0.867 36 H 0.100 0.900 37 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 3.133 3.957 -5.423 7.408 hybrid contribution 1.147 -0.439 -0.064 1.230 sum 4.280 3.518 -5.487 7.797 Atomic orbital electron populations 1.86452 1.18173 1.82387 1.50291 1.24735 0.84539 1.11202 0.95657 0.93885 0.77316 0.73326 0.84908 1.19962 1.07594 0.95132 1.00621 1.22397 1.00383 0.96006 0.88979 1.41885 1.39801 1.08566 1.21133 1.20082 1.09769 0.88169 1.00488 1.17220 0.78322 0.86232 0.80299 1.90857 1.45850 1.39029 1.69416 1.45575 1.53066 1.15633 1.22459 1.21893 1.01443 0.86492 0.91284 1.22242 0.80208 0.97287 0.94068 1.92825 1.43439 1.85670 1.95473 1.23597 1.05890 0.95350 0.92483 1.22285 0.97054 0.97097 0.97092 0.88888 1.22117 0.95740 0.95187 0.86420 1.86407 1.38582 1.73878 1.41311 1.23659 1.01262 1.00215 0.92703 1.21225 1.00168 0.96721 0.94737 0.75692 0.89083 1.23802 1.19910 0.76791 0.72320 0.75402 0.90786 0.88414 0.89178 0.85626 0.92597 0.92588 0.75258 0.86722 0.89967 0.85674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.65 12.88 -148.98 -1.92 -3.57 16 2 C -0.05 -0.04 3.02 71.24 0.22 0.18 16 3 Si 0.80 -3.56 30.59 68.60 2.10 -1.46 16 4 C -0.23 -0.16 5.44 -20.12 -0.11 -0.27 16 5 C 0.06 -0.36 10.45 83.48 0.87 0.51 16 6 N -0.52 2.91 5.99 -183.63 -1.10 1.81 16 7 C -0.07 -0.23 7.06 40.35 0.28 0.05 16 8 C 0.59 3.63 7.79 86.44 0.67 4.30 16 9 O -0.57 -8.69 16.88 -4.35 -0.07 -8.76 16 10 N -0.72 0.83 5.46 -467.08 -2.55 -1.72 16 11 C 0.11 -0.22 5.37 86.38 0.46 0.25 16 12 C 0.08 -0.35 1.66 -10.27 -0.02 -0.37 16 13 F -0.19 0.24 15.02 44.97 0.68 0.91 16 14 C -0.14 0.81 7.13 31.12 0.22 1.04 16 15 C -0.12 0.44 4.19 -10.28 -0.04 0.40 16 16 H 0.09 -0.25 8.14 -2.38 -0.02 -0.27 16 17 C 0.08 -0.22 6.66 71.98 0.48 0.26 16 18 O -0.59 0.21 13.66 -148.98 -2.03 -1.83 16 19 C -0.14 0.73 7.07 31.11 0.22 0.95 16 20 C -0.10 -0.67 10.59 22.57 0.24 -0.43 16 21 H 0.39 -2.28 8.70 -74.06 -0.64 -2.92 16 22 H 0.09 0.34 7.96 -2.39 -0.02 0.32 16 23 H -0.31 -1.43 7.11 99.48 0.71 -0.73 16 24 H -0.27 0.48 7.11 99.48 0.71 1.19 16 25 H 0.22 -3.02 6.19 -2.91 -0.02 -3.04 16 26 H 0.44 -5.53 8.19 -92.71 -0.76 -6.29 16 27 H 0.41 -2.64 7.31 -92.71 -0.68 -3.32 16 28 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 29 H 0.10 -0.24 7.94 -2.39 -0.02 -0.26 16 30 H 0.09 -0.54 8.10 -2.39 -0.02 -0.56 16 31 H 0.13 -1.11 8.10 -2.39 -0.02 -1.13 16 32 H 0.06 -0.15 6.32 -2.39 -0.02 -0.16 16 33 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 34 H 0.40 -3.33 9.12 -74.06 -0.68 -4.01 16 35 H 0.11 -0.80 7.96 -2.39 -0.02 -0.82 16 36 H 0.08 -0.35 8.10 -2.39 -0.02 -0.37 16 37 H 0.13 1.35 8.06 -2.91 -0.02 1.33 16 Total: 0.00 -26.05 317.58 -2.98 -29.03 By element: Atomic # 1 Polarization: -19.69 SS G_CDS: -1.57 Total: -21.26 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: 3.50 Total: 6.86 kcal Atomic # 7 Polarization: 3.73 SS G_CDS: -3.65 Total: 0.08 kcal Atomic # 8 Polarization: -10.14 SS G_CDS: -4.03 Total: -14.16 kcal Atomic # 9 Polarization: 0.24 SS G_CDS: 0.68 Total: 0.91 kcal Atomic # 14 Polarization: -3.56 SS G_CDS: 2.10 Total: -1.46 kcal Total: -26.05 -2.98 -29.03 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500644_10543058.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.323 kcal (2) G-P(sol) polarization free energy of solvation -26.054 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.979 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.033 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.355 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds